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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2281248..2282443- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012006-T1 ID=KJC3_012006-T1|Name=KJC3_012006-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1196bp|location=Sequence derived from alignment at ch8:2281248..2282443- (Aspergillus niger KJC3) TACAAACCAAACCACATACCACTTATACCCTCACAAATCAATCCTCATAT
TCACTCGCGCCCAATCGACAACCCCAAGAACAAGAGATCAGAAAAGCAAA
AAGAAAAAAAGGACCATGCCCCGAAAATCAACCAGCAGCAGCACCCCCGG
CGACGACGGCGGACCAGAACAGTCCCAATCCCAACAAATACACTCCCAAT
CCCCTTCAGACATCGTCCACCTTCCCGAATCAACAGGCCAAATGGTCGAA
GCGACAGAACAACAACTCAAGGCGCGGGCAGAGGGGGGTGTGAGTATTGA
GGTATGTATGCATATTTGCCACTTACTATCCCTCTCTTTTCCCTCTCATA
TCCAAACCTATACATGATACGAGGGATATCATAACTAATATGCAATAATG
GAAATAATGCAGGACTACCTTCTCCCCCGTTCCCTCACCCTCCGACTAGC
AAAATCCGTTCTCCCCCCGAATACATCCATACAGAAGGATGCGGTATTGG
CAATTCAGAAGGCCGCGACGGTGTTTGTCTCGTATTTGTCGTCGCAGTAT
GTCTTTCTTTTCCCTTATTTGATTCTTAAAGCGACAAAAGAGAGGGGTAG
TTTATTAACGTGAGGTGGTATCTAGTGCCAACGAAGCAACCCTCAAACGA
ACCGTCGCGCCGTCAGACGTCTTCAGCGCCATCTCGGAACTAGAGTTCGA
TGGGTTTCGCACACGATTGGAGCAGGAGTTGGAGGCGTTTACAGAGTTGA
AGGCTGGGAAGAGGAGGGCGAAGAAGGGGGATAGTGGTACTACTGCTGCT
GCTGCTGCCGCAGAGGGAGTTGGGAAAAGTGGGGATGCCGAGGAAGAGGA
GGAGGAGGATGGGGATAGAGGGGTGAAGAGGGTGAAGCGGGCGGAGGGGG
AGAAGAAGAATGGTATTGGTGCTGGAGGGGAGGAAGAGGAGGGGGATGAG
ACGCAGGAGGAACACGAGCAGGAACAGGAGCAGGAGGATGAAGAGGAAGA
GGAGGAGGAAGAGGAAGAAGATGACGAGGAAGAAGAAGAAGAACATAAGG
ATGACGAGGATGATGATATTGATCGGGTTGAGGATTTGGATCGGGCTAGA
CGGCCGACGAATCCGGATGTTGAGGGGGATGATTCGGACAGTGAGGATGA
GGATGGGCCTGGGAGTCAGCTGCGAGGGGATTTGGGACTGGGTTAA back to topCoding sequence (CDS) from alignment at ch8:2281248..2282443- >KJC3_012006-T1 ID=KJC3_012006-T1|Name=KJC3_012006-T1|organism=Aspergillus niger KJC3|type=CDS|length=2673bp|location=Sequence derived from alignment at ch8:2281248..2282443- (Aspergillus niger KJC3) TGCCAACGAAGCAACCCTCAAACGAACCGTCGCGCCGTCAGACGTCTTCA GCGCCATCTCGGAACTAGAGTTCGATGGGTTTCGCACACGATTGGAGCAG GAGTTGGAGGCGTTTACAGAGTTGAAGGCTGGGAAGAGGAGGGCGAAGAA GGGGGATAGTGGTACTACTGCTGCTGCTGCTGCCGCAGAGGGAGTTGGGA AAAGTGGGGATGCCGAGGAAGAGGAGGAGGAGGATGGGGATAGAGGGGTG AAGAGGGTGAAGCGGGCGGAGGGGGAGAAGAAGAATGGTATTGGTGCTGG AGGGGAGGAAGAGGAGGGGGATGAGACGCAGGAGGAACACGAGCAGGAAC AGGAGCAGGAGGATGAAGAGGAAGAGGAGGAGGAAGAGGAAGAAGATGAC GAGGAAGAAGAAGAAGAACATAAGGATGACGAGGATGATGATATTGATCG GGTTGAGGATTTGGATCGGGCTAGACGGCCGACGAATCCGGATGTTGAGG GGGATGATTCGGACAGTGAGGATGAGGATGGGCCTGGGAGTCAGCTGCGA GGGGATTTGGGACTGGGTTAAGACTACCTTCTCCCCCGTTCCCTCACCCT CCGACTAGCAAAATCCGTTCTCCCCCCGAATACATCCATACAGAAGGATG CGGTATTGGCAATTCAGAAGGCCGCGACGGTGTTTGTCTCGTATTTGTCG TCGCAATGCCCCGAAAATCAACCAGCAGCAGCACCCCCGGCGACGACGGC GGACCAGAACAGTCCCAATCCCAACAAATACACTCCCAATCCCCTTCAGA CATCGTCCACCTTCCCGAATCAACAGGCCAAATGGTCGAAGCGACAGAAC AACAACTCAAGGCGCGGGCAGAGGGGGGTGTGAGTATTGAGTGCCAACGA AGCAACCCTCAAACGAACCGTCGCGCCGTCAGACGTCTTCAGCGCCATCT CGGAACTAGAGTTCGATGGGTTTCGCACACGATTGGAGCAGGAGTTGGAG GCGTTTACAGAGTTGAAGGCTGGGAAGAGGAGGGCGAAGAAGGGGGATAG TGGTACTACTGCTGCTGCTGCTGCCGCAGAGGGAGTTGGGAAAAGTGGGG ATGCCGAGGAAGAGGAGGAGGAGGATGGGGATAGAGGGGTGAAGAGGGTG AAGCGGGCGGAGGGGGAGAAGAAGAATGGTATTGGTGCTGGAGGGGAGGA AGAGGAGGGGGATGAGACGCAGGAGGAACACGAGCAGGAACAGGAGCAGG AGGATGAAGAGGAAGAGGAGGAGGAAGAGGAAGAAGATGACGAGGAAGAA GAAGAAGAACATAAGGATGACGAGGATGATGATATTGATCGGGTTGAGGA TTTGGATCGGGCTAGACGGCCGACGAATCCGGATGTTGAGGGGGATGATT CGGACAGTGAGGATGAGGATGGGCCTGGGAGTCAGCTGCGAGGGGATTTG GGACTGGGTTAAGACTACCTTCTCCCCCGTTCCCTCACCCTCCGACTAGC AAAATCCGTTCTCCCCCCGAATACATCCATACAGAAGGATGCGGTATTGG CAATTCAGAAGGCCGCGACGGTGTTTGTCTCGTATTTGTCGTCGCAATGC CCCGAAAATCAACCAGCAGCAGCACCCCCGGCGACGACGGCGGACCAGAA CAGTCCCAATCCCAACAAATACACTCCCAATCCCCTTCAGACATCGTCCA CCTTCCCGAATCAACAGGCCAAATGGTCGAAGCGACAGAACAACAACTCA AGGCGCGGGCAGAGGGGGGTGTGAGTATTGAGTGCCAACGAAGCAACCCT CAAACGAACCGTCGCGCCGTCAGACGTCTTCAGCGCCATCTCGGAACTAG AGTTCGATGGGTTTCGCACACGATTGGAGCAGGAGTTGGAGGCGTTTACA GAGTTGAAGGCTGGGAAGAGGAGGGCGAAGAAGGGGGATAGTGGTACTAC TGCTGCTGCTGCTGCCGCAGAGGGAGTTGGGAAAAGTGGGGATGCCGAGG AAGAGGAGGAGGAGGATGGGGATAGAGGGGTGAAGAGGGTGAAGCGGGCG GAGGGGGAGAAGAAGAATGGTATTGGTGCTGGAGGGGAGGAAGAGGAGGG GGATGAGACGCAGGAGGAACACGAGCAGGAACAGGAGCAGGAGGATGAAG AGGAAGAGGAGGAGGAAGAGGAAGAAGATGACGAGGAAGAAGAAGAAGAA CATAAGGATGACGAGGATGATGATATTGATCGGGTTGAGGATTTGGATCG GGCTAGACGGCCGACGAATCCGGATGTTGAGGGGGATGATTCGGACAGTG AGGATGAGGATGGGCCTGGGAGTCAGCTGCGAGGGGATTTGGGACTGGGT TAAGACTACCTTCTCCCCCGTTCCCTCACCCTCCGACTAGCAAAATCCGT TCTCCCCCCGAATACATCCATACAGAAGGATGCGGTATTGGCAATTCAGA AGGCCGCGACGGTGTTTGTCTCGTATTTGTCGTCGCAATGCCCCGAAAAT CAACCAGCAGCAGCACCCCCGGCGACGACGGCGGACCAGAACAGTCCCAA TCCCAACAAATACACTCCCAATCCCCTTCAGACATCGTCCACCTTCCCGA ATCAACAGGCCAAATGGTCGAAGCGACAGAACAACAACTCAAGGCGCGGG CAGAGGGGGGTGTGAGTATTGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0046982 | protein heterodimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012006-T1.utr5p1 | KJC3_012006-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR003958 |
DBxref | InterPro:IPR009072 |
DBxref | PFAM:PF00808 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:2281248..2282443 - |
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