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KJC3_012006-T1, KJC3_012006-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012006-T1
Unique NameKJC3_012006-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2281248..2282443-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012006-T1 ID=KJC3_012006-T1|Name=KJC3_012006-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1196bp|location=Sequence derived from alignment at ch8:2281248..2282443- (Aspergillus niger KJC3)
TACAAACCAAACCACATACCACTTATACCCTCACAAATCAATCCTCATAT TCACTCGCGCCCAATCGACAACCCCAAGAACAAGAGATCAGAAAAGCAAA AAGAAAAAAAGGACCATGCCCCGAAAATCAACCAGCAGCAGCACCCCCGG CGACGACGGCGGACCAGAACAGTCCCAATCCCAACAAATACACTCCCAAT CCCCTTCAGACATCGTCCACCTTCCCGAATCAACAGGCCAAATGGTCGAA GCGACAGAACAACAACTCAAGGCGCGGGCAGAGGGGGGTGTGAGTATTGA GGTATGTATGCATATTTGCCACTTACTATCCCTCTCTTTTCCCTCTCATA TCCAAACCTATACATGATACGAGGGATATCATAACTAATATGCAATAATG GAAATAATGCAGGACTACCTTCTCCCCCGTTCCCTCACCCTCCGACTAGC AAAATCCGTTCTCCCCCCGAATACATCCATACAGAAGGATGCGGTATTGG CAATTCAGAAGGCCGCGACGGTGTTTGTCTCGTATTTGTCGTCGCAGTAT GTCTTTCTTTTCCCTTATTTGATTCTTAAAGCGACAAAAGAGAGGGGTAG TTTATTAACGTGAGGTGGTATCTAGTGCCAACGAAGCAACCCTCAAACGA ACCGTCGCGCCGTCAGACGTCTTCAGCGCCATCTCGGAACTAGAGTTCGA TGGGTTTCGCACACGATTGGAGCAGGAGTTGGAGGCGTTTACAGAGTTGA AGGCTGGGAAGAGGAGGGCGAAGAAGGGGGATAGTGGTACTACTGCTGCT GCTGCTGCCGCAGAGGGAGTTGGGAAAAGTGGGGATGCCGAGGAAGAGGA GGAGGAGGATGGGGATAGAGGGGTGAAGAGGGTGAAGCGGGCGGAGGGGG AGAAGAAGAATGGTATTGGTGCTGGAGGGGAGGAAGAGGAGGGGGATGAG ACGCAGGAGGAACACGAGCAGGAACAGGAGCAGGAGGATGAAGAGGAAGA GGAGGAGGAAGAGGAAGAAGATGACGAGGAAGAAGAAGAAGAACATAAGG ATGACGAGGATGATGATATTGATCGGGTTGAGGATTTGGATCGGGCTAGA CGGCCGACGAATCCGGATGTTGAGGGGGATGATTCGGACAGTGAGGATGA GGATGGGCCTGGGAGTCAGCTGCGAGGGGATTTGGGACTGGGTTAA
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Coding sequence (CDS) from alignment at ch8:2281248..2282443-

>KJC3_012006-T1 ID=KJC3_012006-T1|Name=KJC3_012006-T1|organism=Aspergillus niger KJC3|type=CDS|length=2673bp|location=Sequence derived from alignment at ch8:2281248..2282443- (Aspergillus niger KJC3)
TGCCAACGAAGCAACCCTCAAACGAACCGTCGCGCCGTCAGACGTCTTCA
GCGCCATCTCGGAACTAGAGTTCGATGGGTTTCGCACACGATTGGAGCAG
GAGTTGGAGGCGTTTACAGAGTTGAAGGCTGGGAAGAGGAGGGCGAAGAA
GGGGGATAGTGGTACTACTGCTGCTGCTGCTGCCGCAGAGGGAGTTGGGA
AAAGTGGGGATGCCGAGGAAGAGGAGGAGGAGGATGGGGATAGAGGGGTG
AAGAGGGTGAAGCGGGCGGAGGGGGAGAAGAAGAATGGTATTGGTGCTGG
AGGGGAGGAAGAGGAGGGGGATGAGACGCAGGAGGAACACGAGCAGGAAC
AGGAGCAGGAGGATGAAGAGGAAGAGGAGGAGGAAGAGGAAGAAGATGAC
GAGGAAGAAGAAGAAGAACATAAGGATGACGAGGATGATGATATTGATCG
GGTTGAGGATTTGGATCGGGCTAGACGGCCGACGAATCCGGATGTTGAGG
GGGATGATTCGGACAGTGAGGATGAGGATGGGCCTGGGAGTCAGCTGCGA
GGGGATTTGGGACTGGGTTAAGACTACCTTCTCCCCCGTTCCCTCACCCT
CCGACTAGCAAAATCCGTTCTCCCCCCGAATACATCCATACAGAAGGATG
CGGTATTGGCAATTCAGAAGGCCGCGACGGTGTTTGTCTCGTATTTGTCG
TCGCAATGCCCCGAAAATCAACCAGCAGCAGCACCCCCGGCGACGACGGC
GGACCAGAACAGTCCCAATCCCAACAAATACACTCCCAATCCCCTTCAGA
CATCGTCCACCTTCCCGAATCAACAGGCCAAATGGTCGAAGCGACAGAAC
AACAACTCAAGGCGCGGGCAGAGGGGGGTGTGAGTATTGAGTGCCAACGA
AGCAACCCTCAAACGAACCGTCGCGCCGTCAGACGTCTTCAGCGCCATCT
CGGAACTAGAGTTCGATGGGTTTCGCACACGATTGGAGCAGGAGTTGGAG
GCGTTTACAGAGTTGAAGGCTGGGAAGAGGAGGGCGAAGAAGGGGGATAG
TGGTACTACTGCTGCTGCTGCTGCCGCAGAGGGAGTTGGGAAAAGTGGGG
ATGCCGAGGAAGAGGAGGAGGAGGATGGGGATAGAGGGGTGAAGAGGGTG
AAGCGGGCGGAGGGGGAGAAGAAGAATGGTATTGGTGCTGGAGGGGAGGA
AGAGGAGGGGGATGAGACGCAGGAGGAACACGAGCAGGAACAGGAGCAGG
AGGATGAAGAGGAAGAGGAGGAGGAAGAGGAAGAAGATGACGAGGAAGAA
GAAGAAGAACATAAGGATGACGAGGATGATGATATTGATCGGGTTGAGGA
TTTGGATCGGGCTAGACGGCCGACGAATCCGGATGTTGAGGGGGATGATT
CGGACAGTGAGGATGAGGATGGGCCTGGGAGTCAGCTGCGAGGGGATTTG
GGACTGGGTTAAGACTACCTTCTCCCCCGTTCCCTCACCCTCCGACTAGC
AAAATCCGTTCTCCCCCCGAATACATCCATACAGAAGGATGCGGTATTGG
CAATTCAGAAGGCCGCGACGGTGTTTGTCTCGTATTTGTCGTCGCAATGC
CCCGAAAATCAACCAGCAGCAGCACCCCCGGCGACGACGGCGGACCAGAA
CAGTCCCAATCCCAACAAATACACTCCCAATCCCCTTCAGACATCGTCCA
CCTTCCCGAATCAACAGGCCAAATGGTCGAAGCGACAGAACAACAACTCA
AGGCGCGGGCAGAGGGGGGTGTGAGTATTGAGTGCCAACGAAGCAACCCT
CAAACGAACCGTCGCGCCGTCAGACGTCTTCAGCGCCATCTCGGAACTAG
AGTTCGATGGGTTTCGCACACGATTGGAGCAGGAGTTGGAGGCGTTTACA
GAGTTGAAGGCTGGGAAGAGGAGGGCGAAGAAGGGGGATAGTGGTACTAC
TGCTGCTGCTGCTGCCGCAGAGGGAGTTGGGAAAAGTGGGGATGCCGAGG
AAGAGGAGGAGGAGGATGGGGATAGAGGGGTGAAGAGGGTGAAGCGGGCG
GAGGGGGAGAAGAAGAATGGTATTGGTGCTGGAGGGGAGGAAGAGGAGGG
GGATGAGACGCAGGAGGAACACGAGCAGGAACAGGAGCAGGAGGATGAAG
AGGAAGAGGAGGAGGAAGAGGAAGAAGATGACGAGGAAGAAGAAGAAGAA
CATAAGGATGACGAGGATGATGATATTGATCGGGTTGAGGATTTGGATCG
GGCTAGACGGCCGACGAATCCGGATGTTGAGGGGGATGATTCGGACAGTG
AGGATGAGGATGGGCCTGGGAGTCAGCTGCGAGGGGATTTGGGACTGGGT
TAAGACTACCTTCTCCCCCGTTCCCTCACCCTCCGACTAGCAAAATCCGT
TCTCCCCCCGAATACATCCATACAGAAGGATGCGGTATTGGCAATTCAGA
AGGCCGCGACGGTGTTTGTCTCGTATTTGTCGTCGCAATGCCCCGAAAAT
CAACCAGCAGCAGCACCCCCGGCGACGACGGCGGACCAGAACAGTCCCAA
TCCCAACAAATACACTCCCAATCCCCTTCAGACATCGTCCACCTTCCCGA
ATCAACAGGCCAAATGGTCGAAGCGACAGAACAACAACTCAAGGCGCGGG
CAGAGGGGGGTGTGAGTATTGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012006KJC3_012006Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012006-T1KJC3_012006-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012006-T1.cdsKJC3_012006-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012006-T1.exon3KJC3_012006-T1.exon3Aspergillus niger KJC3exon
KJC3_012006-T1.exon2KJC3_012006-T1.exon2Aspergillus niger KJC3exon
KJC3_012006-T1.exon1KJC3_012006-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012006-T1.utr5p1KJC3_012006-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR003958
DBxrefInterPro:IPR009072
DBxrefPFAM:PF00808
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2281248..2282443 -