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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2282966..2284898- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012007-T1 ID=KJC3_012007-T1|Name=KJC3_012007-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1933bp|location=Sequence derived from alignment at ch8:2282966..2284898- (Aspergillus niger KJC3)
ATCAGAGTGAGTCCCTGTGCTTTGGATTGCCTTTTTGCTCAGAGACGGTT
TAGGGGTTATCAGGCAAGATGGTCAAGCTAGGTATATTCCCTTCATTGGT
ATCGCCATTGTCCTCCTGCTAACCCTTCCTCCAGGCAAAAACTCCAAGCG
GGTTCCCGTCCGCCTACGACACAAGATTGAAAAGGCCTCCGCGGCCAAGC
AACGCAAGCAGAGAAAGCTTGCAAAGAAGGTACTTCCACTTCTTCTTGCA
CAGCCATGTACCATCTTAGTTCATACTAATGCGGCTGATAGAATCCCGAG
TGGCGCTCCAAGATCAAGAAGGACCCCGGTATCCCCAACCTGTTCCCGCA
CAAGGACAAGATCCTCCACGAGATCGAAGAGAAGAGACGCTTGAAGGCAG
AGGAACAACAGCGCATTCGCGATGAGGCCCGCGCTCGTCGCCAGGCTCAG
AAGGAGGGTGGAGCTGAAGAGGCCCCTGCTGATGCCAATGTCATGATTGA
TGAGGACGATCTGATCGACGACGATATGGACGAGGATGTCGGTGACTCCT
CGAATCCCATGGCGGCGCTGCTCGCTTCCGCCCGTGCCAGAGCTGCAGAG
TACGAGGAAGAGCACTCCGATGACGATGATGAGATGGATGAGGACGATTC
TGATGACGAGGATATGGACGAGATGGACCAGGACGAAGAAGGCGGTGCCA
CTCTGGACGTCTCCGCCCCGATTACCCAGAGCACTTCGAAGGAGAGCTCG
CGACGGGCCTTCGACAAGGTCTTCAAGCAGGTTATCGACAACGCCGATGT
GGTGCTGTACGTTCTGGACGCTCGTGATCCTGAGGGCACTCGGTCCAAGG
AGGTGGAGCGCGAGATCATGTCCGCCGACGGAGGCAACAAGCGATTGATT
CTGATCCTCAACAAGATCGATCTGGTGCCTCCTCCGGTGCTCAAGAACTG
GCTGATCCATCTGCGCCGCTACTTCCCCACTCTGCCTTTGAAGGCCTCCA
ACGGCTCGGGCAACGCTCACAGCTTCGACCACAAGCAGCTGACCGTCAAG
GGCACCTCCGAGACGCTCTTCCGCGCGCTCAAGTCGTACGCGCACAACAA
GCAGATGAAGCGGTCCATCTCCGTCGGTGTGATCGGTTACCCCAACGTCG
GCAAGTCGTCCGTTATCAACGCCCTGACGGCCCGTCTCAACAAGGGTTCC
AGCAACGCTTGCCCCACGGGCGCCGAGGCCGGTGTGACCACCAGCCTGCG
GTCCGTGAAGCTGGACAGCAAGCTCAAGCTGATCGACTCTCCCGGTATTG
TCTTCCCCAACTCGAGCGACAAGTCCAGCAAGAAGAAGAAGAAGCAGGAG
GAGCACGCGCGTCTGATCCTCCTCAACGCGGTTCCCCCCAAGCAGATCGA
GGACCCCGTTCCCGCCGTGTCGTTGCTGCTCAAGCGCTTGTCGACATCGG
AGGACCTCATCTCCAAGCTGCTGCAACTCTACAACATCCCGCCGCTCATC
CCGACCGGTGGCGATCAGACGCACGACTTCCTGGTCCATGTGGCCCGCAA
GCGTGGTCGTCTGGGCAAGGGTGGTGTGCCCAACATTGAGGCCGCCGCCA
TGACGGTGATTAATGACTGGCGTGATGGACGCATCCAGGGCTGGGTTAAC
GCCCCTGTGCTGCCCGTGGTGACTACGGCAGAGGGCGCGACGACGCCGGC
CGAGGGCGTGGACACGAAGCAGATTGTGACGGAGTGGGCGGCAGAGTTCA
AGATCGAGGGACTGTGGGGCAACGGGGAGGATGATGAGATGGCCGAATAG
ATGTTTTTCTCATGGATACCAGGCGTTATGGTTCTTAAAAGGTAGATAGT
GTCAATTGCGATGAACATATGCCGAGCAGACCAAGTTACCGTATGTCAAT
GATAAAAACGGCGCGCTCTGAACCAATGCAGTA back to topCoding sequence (CDS) from alignment at ch8:2282966..2284898- >KJC3_012007-T1 ID=KJC3_012007-T1|Name=KJC3_012007-T1|organism=Aspergillus niger KJC3|type=CDS|length=4851bp|location=Sequence derived from alignment at ch8:2282966..2284898- (Aspergillus niger KJC3)
AATCCCGAGTGGCGCTCCAAGATCAAGAAGGACCCCGGTATCCCCAACCT
GTTCCCGCACAAGGACAAGATCCTCCACGAGATCGAAGAGAAGAGACGCT
TGAAGGCAGAGGAACAACAGCGCATTCGCGATGAGGCCCGCGCTCGTCGC
CAGGCTCAGAAGGAGGGTGGAGCTGAAGAGGCCCCTGCTGATGCCAATGT
CATGATTGATGAGGACGATCTGATCGACGACGATATGGACGAGGATGTCG
GTGACTCCTCGAATCCCATGGCGGCGCTGCTCGCTTCCGCCCGTGCCAGA
GCTGCAGAGTACGAGGAAGAGCACTCCGATGACGATGATGAGATGGATGA
GGACGATTCTGATGACGAGGATATGGACGAGATGGACCAGGACGAAGAAG
GCGGTGCCACTCTGGACGTCTCCGCCCCGATTACCCAGAGCACTTCGAAG
GAGAGCTCGCGACGGGCCTTCGACAAGGTCTTCAAGCAGGTTATCGACAA
CGCCGATGTGGTGCTGTACGTTCTGGACGCTCGTGATCCTGAGGGCACTC
GGTCCAAGGAGGTGGAGCGCGAGATCATGTCCGCCGACGGAGGCAACAAG
CGATTGATTCTGATCCTCAACAAGATCGATCTGGTGCCTCCTCCGGTGCT
CAAGAACTGGCTGATCCATCTGCGCCGCTACTTCCCCACTCTGCCTTTGA
AGGCCTCCAACGGCTCGGGCAACGCTCACAGCTTCGACCACAAGCAGCTG
ACCGTCAAGGGCACCTCCGAGACGCTCTTCCGCGCGCTCAAGTCGTACGC
GCACAACAAGCAGATGAAGCGGTCCATCTCCGTCGGTGTGATCGGTTACC
CCAACGTCGGCAAGTCGTCCGTTATCAACGCCCTGACGGCCCGTCTCAAC
AAGGGTTCCAGCAACGCTTGCCCCACGGGCGCCGAGGCCGGTGTGACCAC
CAGCCTGCGGTCCGTGAAGCTGGACAGCAAGCTCAAGCTGATCGACTCTC
CCGGTATTGTCTTCCCCAACTCGAGCGACAAGTCCAGCAAGAAGAAGAAG
AAGCAGGAGGAGCACGCGCGTCTGATCCTCCTCAACGCGGTTCCCCCCAA
GCAGATCGAGGACCCCGTTCCCGCCGTGTCGTTGCTGCTCAAGCGCTTGT
CGACATCGGAGGACCTCATCTCCAAGCTGCTGCAACTCTACAACATCCCG
CCGCTCATCCCGACCGGTGGCGATCAGACGCACGACTTCCTGGTCCATGT
GGCCCGCAAGCGTGGTCGTCTGGGCAAGGGTGGTGTGCCCAACATTGAGG
CCGCCGCCATGACGGTGATTAATGACTGGCGTGATGGACGCATCCAGGGC
TGGGTTAACGCCCCTGTGCTGCCCGTGGTGACTACGGCAGAGGGCGCGAC
GACGCCGGCCGAGGGCGTGGACACGAAGCAGATTGTGACGGAGTGGGCGG
CAGAGTTCAAGATCGAGGGACTGTGGGGCAACGGGGAGGATGATGAGATG
GCCGAATAGGCAAAAACTCCAAGCGGGTTCCCGTCCGCCTACGACACAAG
ATTGAAAAGGCCTCCGCGGCCAAGCAACGCAAGCAGAGAAAGCTTGCAAA
GAAGATGGTCAAGCTAGAATCCCGAGTGGCGCTCCAAGATCAAGAAGGAC
CCCGGTATCCCCAACCTGTTCCCGCACAAGGACAAGATCCTCCACGAGAT
CGAAGAGAAGAGACGCTTGAAGGCAGAGGAACAACAGCGCATTCGCGATG
AGGCCCGCGCTCGTCGCCAGGCTCAGAAGGAGGGTGGAGCTGAAGAGGCC
CCTGCTGATGCCAATGTCATGATTGATGAGGACGATCTGATCGACGACGA
TATGGACGAGGATGTCGGTGACTCCTCGAATCCCATGGCGGCGCTGCTCG
CTTCCGCCCGTGCCAGAGCTGCAGAGTACGAGGAAGAGCACTCCGATGAC
GATGATGAGATGGATGAGGACGATTCTGATGACGAGGATATGGACGAGAT
GGACCAGGACGAAGAAGGCGGTGCCACTCTGGACGTCTCCGCCCCGATTA
CCCAGAGCACTTCGAAGGAGAGCTCGCGACGGGCCTTCGACAAGGTCTTC
AAGCAGGTTATCGACAACGCCGATGTGGTGCTGTACGTTCTGGACGCTCG
TGATCCTGAGGGCACTCGGTCCAAGGAGGTGGAGCGCGAGATCATGTCCG
CCGACGGAGGCAACAAGCGATTGATTCTGATCCTCAACAAGATCGATCTG
GTGCCTCCTCCGGTGCTCAAGAACTGGCTGATCCATCTGCGCCGCTACTT
CCCCACTCTGCCTTTGAAGGCCTCCAACGGCTCGGGCAACGCTCACAGCT
TCGACCACAAGCAGCTGACCGTCAAGGGCACCTCCGAGACGCTCTTCCGC
GCGCTCAAGTCGTACGCGCACAACAAGCAGATGAAGCGGTCCATCTCCGT
CGGTGTGATCGGTTACCCCAACGTCGGCAAGTCGTCCGTTATCAACGCCC
TGACGGCCCGTCTCAACAAGGGTTCCAGCAACGCTTGCCCCACGGGCGCC
GAGGCCGGTGTGACCACCAGCCTGCGGTCCGTGAAGCTGGACAGCAAGCT
CAAGCTGATCGACTCTCCCGGTATTGTCTTCCCCAACTCGAGCGACAAGT
CCAGCAAGAAGAAGAAGAAGCAGGAGGAGCACGCGCGTCTGATCCTCCTC
AACGCGGTTCCCCCCAAGCAGATCGAGGACCCCGTTCCCGCCGTGTCGTT
GCTGCTCAAGCGCTTGTCGACATCGGAGGACCTCATCTCCAAGCTGCTGC
AACTCTACAACATCCCGCCGCTCATCCCGACCGGTGGCGATCAGACGCAC
GACTTCCTGGTCCATGTGGCCCGCAAGCGTGGTCGTCTGGGCAAGGGTGG
TGTGCCCAACATTGAGGCCGCCGCCATGACGGTGATTAATGACTGGCGTG
ATGGACGCATCCAGGGCTGGGTTAACGCCCCTGTGCTGCCCGTGGTGACT
ACGGCAGAGGGCGCGACGACGCCGGCCGAGGGCGTGGACACGAAGCAGAT
TGTGACGGAGTGGGCGGCAGAGTTCAAGATCGAGGGACTGTGGGGCAACG
GGGAGGATGATGAGATGGCCGAATAGGCAAAAACTCCAAGCGGGTTCCCG
TCCGCCTACGACACAAGATTGAAAAGGCCTCCGCGGCCAAGCAACGCAAG
CAGAGAAAGCTTGCAAAGAAGATGGTCAAGCTAGAATCCCGAGTGGCGCT
CCAAGATCAAGAAGGACCCCGGTATCCCCAACCTGTTCCCGCACAAGGAC
AAGATCCTCCACGAGATCGAAGAGAAGAGACGCTTGAAGGCAGAGGAACA
ACAGCGCATTCGCGATGAGGCCCGCGCTCGTCGCCAGGCTCAGAAGGAGG
GTGGAGCTGAAGAGGCCCCTGCTGATGCCAATGTCATGATTGATGAGGAC
GATCTGATCGACGACGATATGGACGAGGATGTCGGTGACTCCTCGAATCC
CATGGCGGCGCTGCTCGCTTCCGCCCGTGCCAGAGCTGCAGAGTACGAGG
AAGAGCACTCCGATGACGATGATGAGATGGATGAGGACGATTCTGATGAC
GAGGATATGGACGAGATGGACCAGGACGAAGAAGGCGGTGCCACTCTGGA
CGTCTCCGCCCCGATTACCCAGAGCACTTCGAAGGAGAGCTCGCGACGGG
CCTTCGACAAGGTCTTCAAGCAGGTTATCGACAACGCCGATGTGGTGCTG
TACGTTCTGGACGCTCGTGATCCTGAGGGCACTCGGTCCAAGGAGGTGGA
GCGCGAGATCATGTCCGCCGACGGAGGCAACAAGCGATTGATTCTGATCC
TCAACAAGATCGATCTGGTGCCTCCTCCGGTGCTCAAGAACTGGCTGATC
CATCTGCGCCGCTACTTCCCCACTCTGCCTTTGAAGGCCTCCAACGGCTC
GGGCAACGCTCACAGCTTCGACCACAAGCAGCTGACCGTCAAGGGCACCT
CCGAGACGCTCTTCCGCGCGCTCAAGTCGTACGCGCACAACAAGCAGATG
AAGCGGTCCATCTCCGTCGGTGTGATCGGTTACCCCAACGTCGGCAAGTC
GTCCGTTATCAACGCCCTGACGGCCCGTCTCAACAAGGGTTCCAGCAACG
CTTGCCCCACGGGCGCCGAGGCCGGTGTGACCACCAGCCTGCGGTCCGTG
AAGCTGGACAGCAAGCTCAAGCTGATCGACTCTCCCGGTATTGTCTTCCC
CAACTCGAGCGACAAGTCCAGCAAGAAGAAGAAGAAGCAGGAGGAGCACG
CGCGTCTGATCCTCCTCAACGCGGTTCCCCCCAAGCAGATCGAGGACCCC
GTTCCCGCCGTGTCGTTGCTGCTCAAGCGCTTGTCGACATCGGAGGACCT
CATCTCCAAGCTGCTGCAACTCTACAACATCCCGCCGCTCATCCCGACCG
GTGGCGATCAGACGCACGACTTCCTGGTCCATGTGGCCCGCAAGCGTGGT
CGTCTGGGCAAGGGTGGTGTGCCCAACATTGAGGCCGCCGCCATGACGGT
GATTAATGACTGGCGTGATGGACGCATCCAGGGCTGGGTTAACGCCCCTG
TGCTGCCCGTGGTGACTACGGCAGAGGGCGCGACGACGCCGGCCGAGGGC
GTGGACACGAAGCAGATTGTGACGGAGTGGGCGGCAGAGTTCAAGATCGA
GGGACTGTGGGGCAACGGGGAGGATGATGAGATGGCCGAATAGGCAAAAA
CTCCAAGCGGGTTCCCGTCCGCCTACGACACAAGATTGAAAAGGCCTCCG
CGGCCAAGCAACGCAAGCAGAGAAAGCTTGCAAAGAAGATGGTCAAGCTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012007-T1.utr3p1 | KJC3_012007-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012007-T1.utr5p1 | KJC3_012007-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR030378 |
| DBxref | InterPro:IPR023179 |
| DBxref | InterPro:IPR014813 |
| DBxref | InterPro:IPR006073 |
| DBxref | PFAM:PF03193 |
| DBxref | PFAM:PF01926 |
| DBxref | PFAM:PF08701 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2282966..2284898 - |
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