You are here

Home

KJC3_012008-T1, KJC3_012008-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012008-T1
Unique NameKJC3_012008-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2285031..2286579+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012008-T1 ID=KJC3_012008-T1|Name=KJC3_012008-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1549bp|location=Sequence derived from alignment at ch8:2285031..2286579+ (Aspergillus niger KJC3)
ATTCGTTCCTTTGGAGTGACTCTCTCTCACGATTTACCAACTCCATTCAC
TCCTTCGGCCTGAAGCCTGAACCCACCTTCTCTTTTCCCTCTTGTCCCTC
CTTTTTGCTGACTGGTGCTGCTGACTGTGTCCACTCCTTACATCTATTTA
CTCACATCTTTGGAGTTGTTCTCATTCCTTCTACCCCCACCTTGTGCTGG
CCCTGGATTTTTCTTGTCCTACTTCCCCCGCCATTATCATGTCTAGACCA
TCCGGCTCCTTTTCTGCCCCTCCGCAAGTCCACACTTTTGACGGACTCCT
CTCCGACTTTGACGGCACCATCGTCGACTCAACCGATGGTCAGTCCCCCT
CATTCCCACCCACCCCTCCTCTGTAACCATGCACTGACATCTGATCTTTA
GCGATTGTGAAACACTGGCACAAGTTCGTCCCCACCACTTCCCTCCGTGT
AACCAAACGCCATCCGTCCTAATCATCACTTGCAGAATCGGTGCGGAGTT
GGGCGTCGACCCCAAGACCATTTTGGCCACTTCCCACGGCCGCCGAAGCA
TCGACACGATCCAGTTGTACGACCCGAAGAAGGCCAATTGGGAGTGTAAG
TGTATTCCTTTGGACACTCTGCAGTTCGATTGAGAAACCTCCGATCTGAA
ACTACCACCGCTACTCCTCCTTATCGTCATATACCACAACAGCAGACAGC
AGACTGACCAGTTGCTTTCCCAACCGCTAGATGTCAGCTACATCGAAGGT
CGCATCCCGAAGGAATACGGATCGGACGCGGTCGAGATTCCCGGGGCGCG
GTATTTCATGTCAGCGTTGGACGACGCCGGCGCTCGCTGGGGCGTGGTAA
CCTCTGGAACGCGTGCGCTGGTGGACGGCTGGCTGGGCGTGCTGAACCTC
GCCCACCCCAAGGTCCTGGTGGTGGCGGAAGATGTCGAGCTGGGCAAGCC
TGACCCCCGGTGCTATCTGCTTGGTCGGACGCGCCTGGGTCTGGAGCATT
CCTCGTCTCTGGTAGTTCTGGAGGATGCGCCGTCGGGCATCAGGGCTGGT
AAGGCGGCCGGGTTCAAAGTCATTGCGCTCACGACGACCCACTCGCTTGC
GCAGCTCCAGGAAGCCGGTGCTGACTGGATCGTCGAGGATCTGAGAAGCA
TCAGCATCAAGGGCGTGGTCGATGGCCAGATGCAGTTGGAAATCCGGAAC
GCTTTCCAATAAAGGGGATTCACTTCGAACTTTGAACACCAGGTGGAGGT
TTCTGGAAACCCGACGACGAAAGTTTGGATCCAATAGATTGCGGGCATCT
TCTTTTTTATCTTCTGGATTTATCCATGCTCTCCATACTCATTTTGATTT
TTATTGTCATTTAGCCTGATTCTGATCCCTTTCGTGTGTGCGGGTCACAG
TATCGGGGTCCAGTCTGTGAAAATCTTAGACCGAAACCTCGATTGTACAT
AGACTAGACAGATACCTACTTGACTTACCTTGGGTAAGTCAAGTTACCAA
TAGATAGACCAGCGAAGAACCGTTTACCTACATGCTACATACCTACCTA
back to top

Coding sequence (CDS) from alignment at ch8:2285031..2286579+

>KJC3_012008-T1 ID=KJC3_012008-T1|Name=KJC3_012008-T1|organism=Aspergillus niger KJC3|type=CDS|length=2856bp|location=Sequence derived from alignment at ch8:2285031..2286579+ (Aspergillus niger KJC3)
ATGTCTAGACCATCCGGCTCCTTTTCTGCCCCTCCGCAAGTCCACACTTT
TGACGGACTCCTCTCCGACTTTGACGGCACCATCGTCGACTCAACCGATG
CGATTGTGAAACACTGGCACAAAATCGGTGCGGAGTTGGGCGTCGACCCC
AAGACCATTTTGGCCACTTCCCACGGCCGCCGAAGCATCGACACGATCCA
GTTGTACGACCCGAAGAAGGCCAATTGGGAGTATGTCAGCTACATCGAAG
GTCGCATCCCGAAGGAATACGGATCGGACGCGGTCGAGATTCCCGGGGCG
CGGTATTTCATGTCAGCGTTGGACGACGCCGGCGCTCGCTGGGGCGTGGT
AACCTCTGGAACGCGTGCGCTGGTGGACGGCTGGCTGGGCGTGCTGAACC
TCGCCCACCCCAAGGTCCTGGTGGTGGCGGAAGATGTCGAGCTGGGCAAG
CCTGACCCCCGGTGCTATCTGCTTGGTCGGACGCGCCTGGGTCTGGAGCA
TTCCTCGTCTCTGGTAGTTCTGGAGGATGCGCCGTCGGGCATCAGGGCTG
GTAAGGCGGCCGGGTTCAAAGTCATTGCGCTCACGACGACCCACTCGCTT
GCGCAGCTCCAGGAAGCCGGTGCTGACTGGATCGTCGAGGATCTGAGAAG
CATCAGCATCAAGGGCGTGGTCGATGGCCAGATGCAGTTGGAAATCCGGA
ACGCTTTCCAATAAATGTCTAGACCATCCGGCTCCTTTTCTGCCCCTCCG
CAAGTCCACACTTTTGACGGACTCCTCTCCGACTTTGACGGCACCATCGT
CGACTCAACCGATGCGATTGTGAAACACTGGCACAAAATCGGTGCGGAGT
TGGGCGTCGACCCCAAGACCATTTTGGCCACTTCCCACGGCCGCCGAAGC
ATCGACACGATCCAGTTGTACGACCCGAAGAAGGCCAATTGGGAGTATGT
CAGCTACATCGAAGGTCGCATCCCGAAGGAATACGGATCGGACGCGGTCG
AGATTCCCGGGGCGCGGTATTTCATGTCAGCGTTGGACGACGCCGGCGCT
CGCTGGGGCGTGGTAACCTCTGGAACGCGTGCGCTGGTGGACGGCTGGCT
GGGCGTGCTGAACCTCGCCCACCCCAAGGTCCTGGTGGTGGCGGAAGATG
TCGAGCTGGGCAAGCCTGACCCCCGGTGCTATCTGCTTGGTCGGACGCGC
CTGGGTCTGGAGCATTCCTCGTCTCTGGTAGTTCTGGAGGATGCGCCGTC
GGGCATCAGGGCTGGTAAGGCGGCCGGGTTCAAAGTCATTGCGCTCACGA
CGACCCACTCGCTTGCGCAGCTCCAGGAAGCCGGTGCTGACTGGATCGTC
GAGGATCTGAGAAGCATCAGCATCAAGGGCGTGGTCGATGGCCAGATGCA
GTTGGAAATCCGGAACGCTTTCCAATAAATGTCTAGACCATCCGGCTCCT
TTTCTGCCCCTCCGCAAGTCCACACTTTTGACGGACTCCTCTCCGACTTT
GACGGCACCATCGTCGACTCAACCGATGCGATTGTGAAACACTGGCACAA
AATCGGTGCGGAGTTGGGCGTCGACCCCAAGACCATTTTGGCCACTTCCC
ACGGCCGCCGAAGCATCGACACGATCCAGTTGTACGACCCGAAGAAGGCC
AATTGGGAGTATGTCAGCTACATCGAAGGTCGCATCCCGAAGGAATACGG
ATCGGACGCGGTCGAGATTCCCGGGGCGCGGTATTTCATGTCAGCGTTGG
ACGACGCCGGCGCTCGCTGGGGCGTGGTAACCTCTGGAACGCGTGCGCTG
GTGGACGGCTGGCTGGGCGTGCTGAACCTCGCCCACCCCAAGGTCCTGGT
GGTGGCGGAAGATGTCGAGCTGGGCAAGCCTGACCCCCGGTGCTATCTGC
TTGGTCGGACGCGCCTGGGTCTGGAGCATTCCTCGTCTCTGGTAGTTCTG
GAGGATGCGCCGTCGGGCATCAGGGCTGGTAAGGCGGCCGGGTTCAAAGT
CATTGCGCTCACGACGACCCACTCGCTTGCGCAGCTCCAGGAAGCCGGTG
CTGACTGGATCGTCGAGGATCTGAGAAGCATCAGCATCAAGGGCGTGGTC
GATGGCCAGATGCAGTTGGAAATCCGGAACGCTTTCCAATAAATGTCTAG
ACCATCCGGCTCCTTTTCTGCCCCTCCGCAAGTCCACACTTTTGACGGAC
TCCTCTCCGACTTTGACGGCACCATCGTCGACTCAACCGATGCGATTGTG
AAACACTGGCACAAAATCGGTGCGGAGTTGGGCGTCGACCCCAAGACCAT
TTTGGCCACTTCCCACGGCCGCCGAAGCATCGACACGATCCAGTTGTACG
ACCCGAAGAAGGCCAATTGGGAGTATGTCAGCTACATCGAAGGTCGCATC
CCGAAGGAATACGGATCGGACGCGGTCGAGATTCCCGGGGCGCGGTATTT
CATGTCAGCGTTGGACGACGCCGGCGCTCGCTGGGGCGTGGTAACCTCTG
GAACGCGTGCGCTGGTGGACGGCTGGCTGGGCGTGCTGAACCTCGCCCAC
CCCAAGGTCCTGGTGGTGGCGGAAGATGTCGAGCTGGGCAAGCCTGACCC
CCGGTGCTATCTGCTTGGTCGGACGCGCCTGGGTCTGGAGCATTCCTCGT
CTCTGGTAGTTCTGGAGGATGCGCCGTCGGGCATCAGGGCTGGTAAGGCG
GCCGGGTTCAAAGTCATTGCGCTCACGACGACCCACTCGCTTGCGCAGCT
CCAGGAAGCCGGTGCTGACTGGATCGTCGAGGATCTGAGAAGCATCAGCA
TCAAGGGCGTGGTCGATGGCCAGATGCAGTTGGAAATCCGGAACGCTTTC
CAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012008KJC3_012008Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012008-T1KJC3_012008-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012008-T1.utr5p1KJC3_012008-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012008-T1.exon1KJC3_012008-T1.exon1Aspergillus niger KJC3exon
KJC3_012008-T1.exon2KJC3_012008-T1.exon2Aspergillus niger KJC3exon
KJC3_012008-T1.exon3KJC3_012008-T1.exon3Aspergillus niger KJC3exon
KJC3_012008-T1.exon4KJC3_012008-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012008-T1.cdsKJC3_012008-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012008-T1.utr3p1KJC3_012008-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036412
DBxrefInterPro:IPR041492
DBxrefInterPro:IPR006439
DBxrefInterPro:IPR023198
DBxrefInterPro:IPR023214
DBxrefPFAM:PF13419
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2285031..2286579 +
Powered by Drupal