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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2317218..2321499- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012014-T2 ID=KJC3_012014-T2|Name=KJC3_012014-T2|organism=Aspergillus niger KJC3|type=mRNA|length=4282bp|location=Sequence derived from alignment at ch8:2317218..2321499- (Aspergillus niger KJC3)
GGGAGTGAAGGCCTCGACTTACCGCAACCACCACTACTGATCGAGGATAC
TCCATTAAAAAGACCCATTGCACATACAAGATAATCACGCAGCATATTCT
CCATACCGACTGGACGATTCACGAAATGCAGCACTCATAATACATACCCA
GACAAGCCAATCTACACGTCCACATACACACACATTCACCATCCATGGCA
ACTACCACCACCACCGCAGCAACATCTCCTCCCAGCAGCAACATCCTCGC
TCCAATCCCTCTCAATCTCGTCCCGAACCATCCCACAAGTACCTCGTTAT
CAGCTGCCCCCCTTCACAACCATCCATACAAGAAGCGCAAGGTCTCGCAT
TCCGAGAATCTCAATGTCCATAATGACGTCTTTGCTGTTTCTGAGGAGCC
GCAGACGATAAGTATTCGTGTATGTATATCCTTTTCGTCATATTATACAT
GTAGATAAAGTTGCTAATTCACCACAATAACCAGTCCCAATCCGCATCCC
TCTCCGAAGACCAAGACCCCTACCACCACCTCACGCCCATCACTACCCTC
TCCCGCAATGCTATTCCCTTCTCATGGATAGACTTCGAACCGCGCGAGCA
TAAGGTTCAGAATGCAGGCCTCCAGGGATGGTGCAATATATTCGTCGGGG
ATATACCTGTCCTTGAGAACGAACATGCGGGGGATACTGTCCTAGCGGTG
CGGGTTGTCGGGGAGGCTGGGGTGTGGATGGTTGAGCGCGTAAAGAGGGG
CGTTTATGCGTTGATGAGGTTGCGGGGTGTAGGTGAGGGGGAGGTGGTTG
TTGCGGCGAAGGCGAGTGCTGGTTCGGCCTTTCCGTTCTCGTTTTCGTCT
GGGATGGAACAGCGAAGAGGGAGGAAAGATGTCGGAGAGTGGTGGGAGGT
CGCGAAGATTGAGGATCCGGAACCGGTTGTCCTGGGCAAGAGGGGACGGA
GTGTTGCGGATGTGGAGGTTGTTTTTGGACATGTGTTCGAGGAAACTCAT
GCCAGAGAGACACAGGATGAGATGCTGCGCAGTGATGAGGGCTCGGAAGG
GCCGGTGTTGCTGGGTGTTGGGGAGCAGAGTGGTGATGTTACTGCTACTG
CTGCTGCTGGAGAGCAGGATGTGGAGGTGACGCAGTCGCCGCAGGAGCTG
CTGGATGGGCTGCGGGAGCAGTATCTGCAGGCGTTGTATGTGTCGAAGGT
GAGTGCGCATGCGCCGTTGTTTTATAAGATTGGCAGAGCGGTGCTAATGG
CTGGGGACAGACTTCCGTGGCTTATTTCGCCAAAGGCCCCCTGGCGCGTT
GTCGCGCGGCATTCCAGTCCTCGGACAATGAGTCCAGCAAACCGGCCCAG
TTGGTCGAGTTCTACAGAGAGGCTATTCTTACGGCGAAGAGAATGGATCA
CAAGTATCGTGAGACTCTGCCGACTACGATTCAGGACCTGCTGTTGAGTG
TTTCGGATGATGAGGCTGCGCCGCCGAAGCGGAAGCGTAGGAGTACAAAG
AAGAAACTCGGCAAGAATGGGCTGTATCCGGAGGAAGGGGACTTGATTCG
CAAGTGGTGGCGCGATCGTGCGCTCAATGATCAGGGGCTTCCGTCTGAGA
TGTCTAGGGATGCGGAATCCAAGAAGCATATTGCGGACCTGCGGTTGCGC
GAAACGCAGCTGCAGATTCTCTTGATCCTCGAGACTATGGCTTTGGAGAC
GATTATTGCGGATGAGAAGAAGCGTGAGGGTAATGGGGAGGGCGCCGACA
AGCCTACAAAAACCGCCAAAGGCAAGAAACCCCAGGATATGAATGTCATG
CTTGAGCTTCACCTCGACCGACTGTGCATCTGGCATGCCGTGAGCTTCGA
GGAGACCGTGGTCGCGGACTCAGCCAAGACCAACCATCTATCTGGGAAGA
AGGTTGAGAGTGATGCTGTTCGCGACTTCTGCACGGAGGTCATCGTCCCG
TTCTACGCGTCTCGCCTGCCGGACAAGTGCAAGCTGATTACTCGGAAACT
TGGCGTCTCAACTGCGATTTCGCCTTTCACGAAGCAGTCTCAAACGAAGA
AGACGCCACGAGAACCAGGAACGCCTGTTGAGCGACAGCATGCTCAGAAG
TCCCGTCGTCGTGCATTCCAGCGCGTGTTGACAGACCAGGCACCGTCTCA
GACCCGACAACCGCCATCACTCAGTCGGTCCAACACAACCCCGGCACCGA
CTGAAAGCCGAAGAGAGTCTCTGGACCCTTTGCTCCCTACTGTCAGTGCC
AACGTGCGCGGCGGCATCCAGAAAGCCAAGCGCGTGGAGAATCGCGAAGT
GGATCTCAACGCCGTTGCGCGCCAGCATGAGACAAAACTCAAGAAGATGC
AGATGCTCGTGGACCAGAAGAAAGAGCTCGACGCAGCCATTCACGCTCTG
CGCAAACCGAACCGCGAGCTCGTGGCCAAGGATATCGCCGAAGACGCCAG
CAAACGACTGTCCACCGGCGGCGGCAGTTCACGAAAGCCGAAGAACCCAG
TGCGCAACCCTCACGGCCAAGGCGTGCAGGTGGCCGCGACGCCCAAAGGC
AGTCGTAAGAAAGACGCCATGGCAGACATGCCTCCTCTTCCCAAGAGTCT
CTCCCAACCAGCCCTCATACCCCAGGGGTCTTCATCCTCTTCCCCGTTCA
CAAGCGAGCCGCAAATTGTCCCCGGCTCTAATATCCGACCCAGCTCAAAT
TCAGGGCTCTTCCGATCTGCCGACGACGGGGCGATCCAGGAAACGCCCAC
GCGGCGACCAACGCAGCCTCTATCATCAGCTGATATCGGCGCGTCGCCAA
AGAGAAAAATATCAGGACCCCTTTTCCGCGTCCCCAGCAAGCCGGCCCCG
GCCCCAACTTCAGTCCCTGCCCCCGTTCCTCCTGTCTTTCGGACCACTGA
AAAGGGTCCAACCACGCCGATCGCAGCCCGACACGTGGACGCCTATATGC
CCCGAGTCAAGTCCATCGGCTCCAGCAAGCCGTCCATGATCATGGAAACG
CCTCCGAAACCGGCCATGGCCCCTATTTTTTCGATTCCTTCTGCTCCTGT
GATTGCGGAAACTGCAGCCGCGGAGCCGGCAGCAGTGGCAGGGACACCTG
TGAAGGGTGCTACTACTGCGACCACAACCACGATTACTACTACCCCGGCT
AAAGCCAATGTCTTTGCTACGCCTGTGAAGGGTACAAGTGCCGCGCGACT
AGCCGTGCCGACGACTGCGGCTGCGGCTGTGCCTGCGACGCCGGAGAAAT
CGATCTACGCACAGTTGGGGTGGGATGATGATGATGATGACTTAGCATAG
TGGCGTTTACATGTTATATCTTCTTGTGCCGTTTTGAATAGTGTGGGTTA
GCGGGCGTTGAACATATGAATTAGTACTTAGAACATACATACCCTGAGAT
GGCAAATTAGCTAGGTTAGTATTATGACAATCATCGAGTTAGAACATAAG
CATAGTGACATATAGTGAGAAAAATACGCAATTAAATCATCCAGTATGCA
ATACACTCCCCAGAAAACAAAGTACGAACCCATCTATTTACCCCAACAGG
TAATCAGTACTTCCCACATAGTGATAATGATCATGATAGTGATGATGATG
ATGACGATGTCGCCTCACGCCAATCCCTACCCTAATCATTACTAACAATC
AAAAAACCAGACCCATAATCCGCTCGCGTTGGTGGCAACCCCAACAGAAC
TCAATTAGTTCGTTTAGAAAAGTACCTATGACTCATCAATCGTCATCAAC
GGCAAAAAAGAAAGACAGTGGTAGTATGATTTATGATGAAAGTTGCAACT
TTTTTCGCCTCCATGATGAGGTAGATACAAGAATTGGGGGTAGTGGTGTG
TGTCTTGTTCGCCTTACCTTCCTATCTTGGTACTGGGGTGCTTACCTTCC
TGTTTTGGTGATGGGTGATGATATCGTGGTTGTGCATTGCAGGCGCAAGA
GTAGATCACGCCATGCTGGGTATGTACGTATGTATGTATGTATGTATGTG
TGGATGTTTGCTGGGCCGCGCCACGCGTTGCCACATCTCTTTTCCTCTCT
TTCTTCTTCATCATAGTAATAATCTGGTGGTTTCTGTATGTATGTATGTA
TGTATCGTTGGGTATCAGAAATTACTGTAAAGTTAGTATGTGGTGAATGA
GTGCCTGATGGTTGATAGTAGTTGGTATCACATGGGTGCTATTATGGGTA
TGATAAGTTGGTTTCTGGGGTTATGAGTGGTTGATTACTTGTTTTGACTG
GTCGTAGATAAATTAATTAGTTAAGATGGCAG back to topCoding sequence (CDS) from alignment at ch8:2317218..2321499- >KJC3_012014-T2 ID=KJC3_012014-T2|Name=KJC3_012014-T2|organism=Aspergillus niger KJC3|type=CDS|length=1908bp|location=Sequence derived from alignment at ch8:2317218..2321499- (Aspergillus niger KJC3)
ATGGATCACAAGTATCGTGAGACTCTGCCGACTACGATTCAGGACCTGCT
GTTGAGTGTTTCGGATGATGAGGCTGCGCCGCCGAAGCGGAAGCGTAGGA
GTACAAAGAAGAAACTCGGCAAGAATGGGCTGTATCCGGAGGAAGGGGAC
TTGATTCGCAAGTGGTGGCGCGATCGTGCGCTCAATGATCAGGGGCTTCC
GTCTGAGATGTCTAGGGATGCGGAATCCAAGAAGCATATTGCGGACCTGC
GGTTGCGCGAAACGCAGCTGCAGATTCTCTTGATCCTCGAGACTATGGCT
TTGGAGACGATTATTGCGGATGAGAAGAAGCGTGAGGGTAATGGGGAGGG
CGCCGACAAGCCTACAAAAACCGCCAAAGGCAAGAAACCCCAGGATATGA
ATGTCATGCTTGAGCTTCACCTCGACCGACTGTGCATCTGGCATGCCGTG
AGCTTCGAGGAGACCGTGGTCGCGGACTCAGCCAAGACCAACCATCTATC
TGGGAAGAAGGTTGAGAGTGATGCTGTTCGCGACTTCTGCACGGAGGTCA
TCGTCCCGTTCTACGCGTCTCGCCTGCCGGACAAGTGCAAGCTGATTACT
CGGAAACTTGGCGTCTCAACTGCGATTTCGCCTTTCACGAAGCAGTCTCA
AACGAAGAAGACGCCACGAGAACCAGGAACGCCTGTTGAGCGACAGCATG
CTCAGAAGTCCCGTCGTCGTGCATTCCAGCGCGTGTTGACAGACCAGGCA
CCGTCTCAGACCCGACAACCGCCATCACTCAGTCGGTCCAACACAACCCC
GGCACCGACTGAAAGCCGAAGAGAGTCTCTGGACCCTTTGCTCCCTACTG
TCAGTGCCAACGTGCGCGGCGGCATCCAGAAAGCCAAGCGCGTGGAGAAT
CGCGAAGTGGATCTCAACGCCGTTGCGCGCCAGCATGAGACAAAACTCAA
GAAGATGCAGATGCTCGTGGACCAGAAGAAAGAGCTCGACGCAGCCATTC
ACGCTCTGCGCAAACCGAACCGCGAGCTCGTGGCCAAGGATATCGCCGAA
GACGCCAGCAAACGACTGTCCACCGGCGGCGGCAGTTCACGAAAGCCGAA
GAACCCAGTGCGCAACCCTCACGGCCAAGGCGTGCAGGTGGCCGCGACGC
CCAAAGGCAGTCGTAAGAAAGACGCCATGGCAGACATGCCTCCTCTTCCC
AAGAGTCTCTCCCAACCAGCCCTCATACCCCAGGGGTCTTCATCCTCTTC
CCCGTTCACAAGCGAGCCGCAAATTGTCCCCGGCTCTAATATCCGACCCA
GCTCAAATTCAGGGCTCTTCCGATCTGCCGACGACGGGGCGATCCAGGAA
ACGCCCACGCGGCGACCAACGCAGCCTCTATCATCAGCTGATATCGGCGC
GTCGCCAAAGAGAAAAATATCAGGACCCCTTTTCCGCGTCCCCAGCAAGC
CGGCCCCGGCCCCAACTTCAGTCCCTGCCCCCGTTCCTCCTGTCTTTCGG
ACCACTGAAAAGGGTCCAACCACGCCGATCGCAGCCCGACACGTGGACGC
CTATATGCCCCGAGTCAAGTCCATCGGCTCCAGCAAGCCGTCCATGATCA
TGGAAACGCCTCCGAAACCGGCCATGGCCCCTATTTTTTCGATTCCTTCT
GCTCCTGTGATTGCGGAAACTGCAGCCGCGGAGCCGGCAGCAGTGGCAGG
GACACCTGTGAAGGGTGCTACTACTGCGACCACAACCACGATTACTACTA
CCCCGGCTAAAGCCAATGTCTTTGCTACGCCTGTGAAGGGTACAAGTGCC
GCGCGACTAGCCGTGCCGACGACTGCGGCTGCGGCTGTGCCTGCGACGCC
GGAGAAATCGATCTACGCACAGTTGGGGTGGGATGATGATGATGATGACT
TAGCATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012014-T2.utr3p1 | KJC3_012014-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013948 |
| DBxref | PFAM:PF08639 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2317218..2321499 - |
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