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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2327521..2331607- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012018-T2 ID=KJC3_012018-T2|Name=KJC3_012018-T2|organism=Aspergillus niger KJC3|type=mRNA|length=4087bp|location=Sequence derived from alignment at ch8:2327521..2331607- (Aspergillus niger KJC3)
ATCCGCCCTCCTTTTTTCTCCCCTTCGCCCTTCTCGCCCGATTTTCCCTC
TAAACCAACTGGAACTAACCCATTCAGAAACTGACTGCGTGTAATCCATG
TGCGCATGTCTGCTTTTGTAATGGACTGATTGATCCAGCTAGATTGGGAT
TGTCTGAACTTTACCTATTGACTATCTACTTGCTCACCCGTCCAATGGGT
CCGTTCCATCCACTATTCCCCTGAACGTCTTGTCAAACCTGCCTTTCCAT
CGATTATTGCCCCGTGCCAAACTAAACGCCTCCTGCCCTCGTCACCATGA
GGGTGCGTCGATCCTGAACTCATTGACCAACGATTGTTTCTGATCTTCCC
TCCTCTCTGTCTCCCCCCCCCCCTTCCCGTCTTTGCCTGTTCTTGTCAAT
TGTCCCGGGTTTGGCGCTCAACCTTGCCAATTAGAGTGTCTTCTCCCTCA
TGGCCCCAGGCTGGACTTCTCCGCCTGCCTCGGGCGCTTTATCCTCAAGC
CCAAACCATAATCATCTCCATTCCTTGTCCCAGACTTATCATCAGTCTCC
ATTCCCTGTGTCTGATGACCCCGGCGCTTGGCCAAGTCCTCCTCCTCCTC
GTCCTCCCTCCTCTGCTTCCTCCACCTCCGCTGCCGCTGCTGGTCCTGTC
ACCTCTCCTTCTTCCCATTTGCCGCCCTCTAATACCTCTCTGGCCTCTCC
CCCTCCTTCTGCTACCCTTGTGCGCAGGAAACCGCTTCCCCAGGATGCTG
TGATCCTGTCGCGCCAATCCAGGCCTCCTTCCTCGCCCCTGCTACCCTCC
TCCCCCCGGGGTGACTCGCCTGCAGATCCGTTATCACTCCCTGTCTCTTC
CTCTCCTCTCGCTGCTGACCATCATCATAACTTGGCCTTCTCCCCTGCAT
CCACCTACTCCTTCTCCGGTTCTGTGTATGAAGTTGACGGCCAGGAGGAC
GAGGACTCCCTTCATTCGGTTCCAAGGAACCTGGACAGGTATGACAGCCG
TTGCCCCCCTGCCCGTGCTCTCTTCCCCTCACCTTCTCCCCCTGCTCCCC
CTCACTCTTGTGCTTGCGGTCCTTGCAATCTCACGCTACTTCTGCAGCCT
GGAGAAGGCCTTTCCATGTCCACTTTTCCCTTCAGACGTGGCAAGACTAA
TCTCGGACCTTTTCTACTCTTCTCCAGATCTCCTCGTGGTGGTCCGTCCG
CGTCCAATCTACGTATAGATACCTCCGCAGCCTACGTTGACGACGACGAC
GAGAGCAGCAACAATCATACCCACAATCCCAGATACTCCTCTCAATTCTC
GAATGGGACGTCCTTACACAGCCGTCTTGTGAGCGAGCCCTTCGTGCCCA
TCCTGAAATCACCGGCTTTCCTCCCCAAGCGCCCCACGACCATGGCCTTG
AATTTACCCTCACGCCGTCCTCCACCTCTACATATAGATTCCCCCAGCCG
GTCCTCATCCGGTGACTCCAAACAGCCGAAAACGCCGGCGAACAAGATCA
GTTCCTTTTTTGGGTGGCGCGCTACAACCTCTTCTCCCGGCGCGGAATCC
TCTAGTACCGAGATCTCCGAGTCCGGTCGTTCTCCGGTGCCTTCCCCGAT
GCCTGCTTCCCTCCACAGCGCATCCTTCTCCATAACACCCTCCACCACGG
TGCCCTTCGACCCCTCCAAGCCGCAAGTGCCTCTCCCGCAGCGGAACCCA
TCTCTGAGCAGTGGCAGTATCCTGGACTCCAGGGCGACGACTCTGGTGAC
CGAGCTTGAGAATGAGCTGCGGGAGATCAGTTCCGAGCTGGCCGGGTCCA
TCCGGCGGGAGATGGAGTTGGAGGATTTGGTGGAGAGATTGCAGTCAGAT
ATGCCCTTAGATACCCCCAATCGCCGGACTAGCGATTACTTCTCCGATTC
GGGCAGCAGCTCCATCCGCTACGCCTTTGAGTCGGGTGGTCGGGTCGAAG
ACATTGAGAAGTACAAGCGCACTGCAGAGCAGGAGCGGGCTCAGATCAAG
GTGGATCTGGGCCAAAAGTTGCAAGAAGAGCGTAGTCGCCGGGCAGCCTC
GGAAGCACACGTCCAGATTCTAGAGTCCCAGGTCCAGCAGGTACGACTTT
CCATCAGCTGAGAGAACGATAGTCCCAGACTAACATATTTTAGCTGCGAC
GGGAGAGAGTAGATCTCTCGGACCTGTCCTCCCGGACAAGGGAGCTCGAA
GCCGCATTAGATGATACCCGTAGGAAGCTGGCCGAGGAGCGCCAGATCAA
GGACAATTTCGAAGACCTGTTGACCGCCATGCGAGTAGAACTCGAACAGT
TGCGAAACGAACGGGATCATATGCGTGACACTGTGATCCCTCAACTGCAA
CAAGGTGGTCAACCTGCCGCGCCTTCATCTGATCCCTCGGAAGTCCAGCG
GTTGCTGGAGGAAATCGAAGCGTTGAAGATTGAAAATGCCTCTCTCGCCC
AGCTGCAGGGCAGTCGATTCGCTTCAATTGCCGAAGAAGATGGCATGCCC
ACTGCCCGAAATGTCGGATTGGGACTGTCGCGGTCGAATTCGCTGGCGCG
CGTGCGTACCAAGCCGTCGCCCGGTCTATCCCGCTCCAGTTCCCTGTCGC
GGTCGAACTCGGTTTCTGCCAAGGAGCGCAATGAGTCTCCCCGCGAGAAT
CTGGCGGATAGGATTGAGGATGTCGAAGCGCAACGCGATGCTCTTCACCA
ATCTCTTCGGCGTCTGCTCGATCGTCAGGCCCACGATGCCCGTGAATACG
AGAAACGGCTTCGGCTCATGGAGATGGAGATTGCGCGCGCACAGCAAGTA
GGCTCTCCGCGCAAGCTGGGCTATGAGCGCGAAGTGCGCAACTTGCGCGA
AGAAGTGAATGACCTTCGGCAGCGTGCCGAGGAAGCTCTGGAACAAAAGT
GGCAGTGCGAAAAAGGATTGGCAGGTCTGAAGATGGACCTGGACCGGGCT
GAACAGGAAACCACCTCCTTGCGTGTAATACTCCAGGAGCACGACATCAC
CGTTCCCGAAGACCTCGAATGTGATCGGGATGGATTTGCCGAGGTCCTCG
CAACCTCTTCCTCCCTGGAGTCCGCTTACAGACAACTTCAGGCGGATCGG
GAAATCGCCGAAGCCAGCGCGGCTCAGTCGCCCCTTGCCGAGCAAAACTC
ACTCGTGGAGTCAGTCAACCGCACAGAGGTGCTCGCGCAGCATGTGCAAC
AGCAGCTGGCCAGCAACAATGCCCTGCGGAGCCGTTTGGCGGAGGCCATT
GGCAAGGGTGAAAAGGAGCAACAGCTGTCAGCCGCTCGTATCAATGAGAT
GCAGGCCCGTCTCAAGGAGATGGAGGACATCTTGCTGATGGCGCAGCAGT
ACTCCGAGGACGAAATGGCGCGCCACGAAGAAGAAGTGCGCGCTCTTGAG
GAGAACCACAACGCGCAGCTGAAGCGCATGAAGAATGGCGCTCGCAGCCC
TGCGGCCCTGTCGCCCATGCCTCCGACCACGCCGTTTGGCGCGCGGTCGC
CACGTCTGGACTTGACGACCAGTGGTAGGGGCATTGCTTTGGATCAGGCT
ATCCAATCTGAAACGCTGGAACGGCGGGTGAAGGAGCTGGAGAAGCTCCT
TCGCGACGCTGATTCGGAGATGGAGGAAGTTGTGAGCCGGATGAACCGGG
CGCAAATCGAAGTTGCGGAGCTCCAGTCTGATCGGTATGTAATGAGAAAC
GTGTTTATGTCCAGGTAATGGCTAACAAACTGCAACAGCGACGATGCACT
CCGCCAGACCCGCAAACTCCAGGCCGAAATCATGGCCCAACGTGAGACGT
TCAGGACTCTGATGGCTTGAACGACAGCATATTAGACTTTTTCTTGTTTC
TTCGTTGTATAAAATAATCCCATGGGAGGTGTTTTGGCGTCGACACTCTA
GCGTGTGACATGTTTTGGAAGCACCTCTTTGTTTTGGTCGAGGTGCAGCG
CATACTCCAATGCTTGTATATGGTCAACTTGGAGTCCATGGCCAGATGGG
CATGTATATATCTCACGATCACGACGTGATCATGTATAATTGCATAGATG
TACAGTTGTCAGCTGAGTATACTGAGATGAGAAAAAT back to topCoding sequence (CDS) from alignment at ch8:2327521..2331607- >KJC3_012018-T2 ID=KJC3_012018-T2|Name=KJC3_012018-T2|organism=Aspergillus niger KJC3|type=CDS|length=5100bp|location=Sequence derived from alignment at ch8:2327521..2331607- (Aspergillus niger KJC3)
CTGCGACGGGAGAGAGTAGATCTCTCGGACCTGTCCTCCCGGACAAGGGA
GCTCGAAGCCGCATTAGATGATACCCGTAGGAAGCTGGCCGAGGAGCGCC
AGATCAAGGACAATTTCGAAGACCTGTTGACCGCCATGCGAGTAGAACTC
GAACAGTTGCGAAACGAACGGGATCATATGCGTGACACTGTGATCCCTCA
ACTGCAACAAGGTGGTCAACCTGCCGCGCCTTCATCTGATCCCTCGGAAG
TCCAGCGGTTGCTGGAGGAAATCGAAGCGTTGAAGATTGAAAATGCCTCT
CTCGCCCAGCTGCAGGGCAGTCGATTCGCTTCAATTGCCGAAGAAGATGG
CATGCCCACTGCCCGAAATGTCGGATTGGGACTGTCGCGGTCGAATTCGC
TGGCGCGCGTGCGTACCAAGCCGTCGCCCGGTCTATCCCGCTCCAGTTCC
CTGTCGCGGTCGAACTCGGTTTCTGCCAAGGAGCGCAATGAGTCTCCCCG
CGAGAATCTGGCGGATAGGATTGAGGATGTCGAAGCGCAACGCGATGCTC
TTCACCAATCTCTTCGGCGTCTGCTCGATCGTCAGGCCCACGATGCCCGT
GAATACGAGAAACGGCTTCGGCTCATGGAGATGGAGATTGCGCGCGCACA
GCAAGTAGGCTCTCCGCGCAAGCTGGGCTATGAGCGCGAAGTGCGCAACT
TGCGCGAAGAAGTGAATGACCTTCGGCAGCGTGCCGAGGAAGCTCTGGAA
CAAAAGTGGCAGTGCGAAAAAGGATTGGCAGGTCTGAAGATGGACCTGGA
CCGGGCTGAACAGGAAACCACCTCCTTGCGTGTAATACTCCAGGAGCACG
ACATCACCGTTCCCGAAGACCTCGAATGTGATCGGGATGGATTTGCCGAG
GTCCTCGCAACCTCTTCCTCCCTGGAGTCCGCTTACAGACAACTTCAGGC
GGATCGGGAAATCGCCGAAGCCAGCGCGGCTCAGTCGCCCCTTGCCGAGC
AAAACTCACTCGTGGAGTCAGTCAACCGCACAGAGGTGCTCGCGCAGCAT
GTGCAACAGCAGCTGGCCAGCAACAATGCCCTGCGGAGCCGTTTGGCGGA
GGCCATTGGCAAGGGTGAAAAGGAGCAACAGCTGTCAGCCGCTCGTATCA
ATGAGATGCAGGCCCGTCTCAAGGAGATGGAGGACATCTTGCTGATGGCG
CAGCAGTACTCCGAGGACGAAATGGCGCGCCACGAAGAAGAAGTGCGCGC
TCTTGAGGAGAACCACAACGCGCAGCTGAAGCGCATGAAGAATGGCGCTC
GCAGCCCTGCGGCCCTGTCGCCCATGCCTCCGACCACGCCGTTTGGCGCG
CGGTCGCCACGTCTGGACTTGACGACCAGTGGTAGGGGCATTGCTTTGGA
TCAGGCTATCCAATCTGAAACGCTGGAACGGCGGGTGAAGGAGCTGGAGA
AGCTCCTTCGCGACGCTGATTCGGAGATGGAGGAAGTTGTGAGCCGGATG
AACCGGGCGCAAATCGAAGTTGCGGAGCTCCAGTCTGATCGGTATGTAAT
GAGAAACGTGTTTATGTCCAGGTAAATGTCCACTTTTCCCTTCAGACGTG
GCAAGACTAATCTCGGACCTTTTCTACTCTTCTCCAGATCTCCTCGTGGT
GGTCCGTCCGCGTCCAATCTACGTATAGATACCTCCGCAGCCTACGTTGA
CGACGACGACGAGAGCAGCAACAATCATACCCACAATCCCAGATACTCCT
CTCAATTCTCGAATGGGACGTCCTTACACAGCCGTCTTGTGAGCGAGCCC
TTCGTGCCCATCCTGAAATCACCGGCTTTCCTCCCCAAGCGCCCCACGAC
CATGGCCTTGAATTTACCCTCACGCCGTCCTCCACCTCTACATATAGATT
CCCCCAGCCGGTCCTCATCCGGTGACTCCAAACAGCCGAAAACGCCGGCG
AACAAGATCAGTTCCTTTTTTGGGTGGCGCGCTACAACCTCTTCTCCCGG
CGCGGAATCCTCTAGTACCGAGATCTCCGAGTCCGGTCGTTCTCCGGTGC
CTTCCCCGATGCCTGCTTCCCTCCACAGCGCATCCTTCTCCATAACACCC
TCCACCACGGTGCCCTTCGACCCCTCCAAGCCGCAAGTGCCTCTCCCGCA
GCGGAACCCATCTCTGAGCAGTGGCAGTATCCTGGACTCCAGGGCGACGA
CTCTGGTGACCGAGCTTGAGAATGAGCTGCGGGAGATCAGTTCCGAGCTG
GCCGGGTCCATCCGGCGGGAGATGGAGTTGGAGGATTTGGTGGAGAGATT
GCAGTCAGATATGCCCTTAGATACCCCCAATCGCCGGACTAGCGATTACT
TCTCCGATTCGGGCAGCAGCTCCATCCGCTACGCCTTTGAGTCGGGTGGT
CGGGTCGAAGACATTGAGAAGTACAAGCGCACTGCAGAGCAGGAGCGGGC
TCAGATCAAGGTGGATCTGGGCCAAAAGTTGCAAGAAGAGCGTAGTCGCC
GGGCAGCCTCGGAAGCACACGTCCAGATTCTAGAGTCCCAGGTCCAGCAG
CTGCGACGGGAGAGAGTAGATCTCTCGGACCTGTCCTCCCGGACAAGGGA
GCTCGAAGCCGCATTAGATGATACCCGTAGGAAGCTGGCCGAGGAGCGCC
AGATCAAGGACAATTTCGAAGACCTGTTGACCGCCATGCGAGTAGAACTC
GAACAGTTGCGAAACGAACGGGATCATATGCGTGACACTGTGATCCCTCA
ACTGCAACAAGGTGGTCAACCTGCCGCGCCTTCATCTGATCCCTCGGAAG
TCCAGCGGTTGCTGGAGGAAATCGAAGCGTTGAAGATTGAAAATGCCTCT
CTCGCCCAGCTGCAGGGCAGTCGATTCGCTTCAATTGCCGAAGAAGATGG
CATGCCCACTGCCCGAAATGTCGGATTGGGACTGTCGCGGTCGAATTCGC
TGGCGCGCGTGCGTACCAAGCCGTCGCCCGGTCTATCCCGCTCCAGTTCC
CTGTCGCGGTCGAACTCGGTTTCTGCCAAGGAGCGCAATGAGTCTCCCCG
CGAGAATCTGGCGGATAGGATTGAGGATGTCGAAGCGCAACGCGATGCTC
TTCACCAATCTCTTCGGCGTCTGCTCGATCGTCAGGCCCACGATGCCCGT
GAATACGAGAAACGGCTTCGGCTCATGGAGATGGAGATTGCGCGCGCACA
GCAAGTAGGCTCTCCGCGCAAGCTGGGCTATGAGCGCGAAGTGCGCAACT
TGCGCGAAGAAGTGAATGACCTTCGGCAGCGTGCCGAGGAAGCTCTGGAA
CAAAAGTGGCAGTGCGAAAAAGGATTGGCAGGTCTGAAGATGGACCTGGA
CCGGGCTGAACAGGAAACCACCTCCTTGCGTGTAATACTCCAGGAGCACG
ACATCACCGTTCCCGAAGACCTCGAATGTGATCGGGATGGATTTGCCGAG
GTCCTCGCAACCTCTTCCTCCCTGGAGTCCGCTTACAGACAACTTCAGGC
GGATCGGGAAATCGCCGAAGCCAGCGCGGCTCAGTCGCCCCTTGCCGAGC
AAAACTCACTCGTGGAGTCAGTCAACCGCACAGAGGTGCTCGCGCAGCAT
GTGCAACAGCAGCTGGCCAGCAACAATGCCCTGCGGAGCCGTTTGGCGGA
GGCCATTGGCAAGGGTGAAAAGGAGCAACAGCTGTCAGCCGCTCGTATCA
ATGAGATGCAGGCCCGTCTCAAGGAGATGGAGGACATCTTGCTGATGGCG
CAGCAGTACTCCGAGGACGAAATGGCGCGCCACGAAGAAGAAGTGCGCGC
TCTTGAGGAGAACCACAACGCGCAGCTGAAGCGCATGAAGAATGGCGCTC
GCAGCCCTGCGGCCCTGTCGCCCATGCCTCCGACCACGCCGTTTGGCGCG
CGGTCGCCACGTCTGGACTTGACGACCAGTGGTAGGGGCATTGCTTTGGA
TCAGGCTATCCAATCTGAAACGCTGGAACGGCGGGTGAAGGAGCTGGAGA
AGCTCCTTCGCGACGCTGATTCGGAGATGGAGGAAGTTGTGAGCCGGATG
AACCGGGCGCAAATCGAAGTTGCGGAGCTCCAGTCTGATCGGTATGTAAT
GAGAAACGTGTTTATGTCCAGGTAAATGTCCACTTTTCCCTTCAGACGTG
GCAAGACTAATCTCGGACCTTTTCTACTCTTCTCCAGATCTCCTCGTGGT
GGTCCGTCCGCGTCCAATCTACGTATAGATACCTCCGCAGCCTACGTTGA
CGACGACGACGAGAGCAGCAACAATCATACCCACAATCCCAGATACTCCT
CTCAATTCTCGAATGGGACGTCCTTACACAGCCGTCTTGTGAGCGAGCCC
TTCGTGCCCATCCTGAAATCACCGGCTTTCCTCCCCAAGCGCCCCACGAC
CATGGCCTTGAATTTACCCTCACGCCGTCCTCCACCTCTACATATAGATT
CCCCCAGCCGGTCCTCATCCGGTGACTCCAAACAGCCGAAAACGCCGGCG
AACAAGATCAGTTCCTTTTTTGGGTGGCGCGCTACAACCTCTTCTCCCGG
CGCGGAATCCTCTAGTACCGAGATCTCCGAGTCCGGTCGTTCTCCGGTGC
CTTCCCCGATGCCTGCTTCCCTCCACAGCGCATCCTTCTCCATAACACCC
TCCACCACGGTGCCCTTCGACCCCTCCAAGCCGCAAGTGCCTCTCCCGCA
GCGGAACCCATCTCTGAGCAGTGGCAGTATCCTGGACTCCAGGGCGACGA
CTCTGGTGACCGAGCTTGAGAATGAGCTGCGGGAGATCAGTTCCGAGCTG
GCCGGGTCCATCCGGCGGGAGATGGAGTTGGAGGATTTGGTGGAGAGATT
GCAGTCAGATATGCCCTTAGATACCCCCAATCGCCGGACTAGCGATTACT
TCTCCGATTCGGGCAGCAGCTCCATCCGCTACGCCTTTGAGTCGGGTGGT
CGGGTCGAAGACATTGAGAAGTACAAGCGCACTGCAGAGCAGGAGCGGGC
TCAGATCAAGGTGGATCTGGGCCAAAAGTTGCAAGAAGAGCGTAGTCGCC
GGGCAGCCTCGGAAGCACACGTCCAGATTCTAGAGTCCCAGGTCCAGCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012018-T2.utr3p1 | KJC3_012018-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012018-T2.utr5p1 | KJC3_012018-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2327521..2331607 - |
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