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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2344926..2347644- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012024-T1 ID=KJC3_012024-T1|Name=KJC3_012024-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2719bp|location=Sequence derived from alignment at ch8:2344926..2347644- (Aspergillus niger KJC3)
CCTTTTTCGTCTTTTCCGTCGCCGGTCCAACAAACTAATCAATTAATTAT
CATCCATCATATCATCCCATCAATCACTTCATACGGCCGTCGCTGCCCCA
ACTTCCATCCCTCCTCTCTGGTCTCTGCAGGACAATGGCTTCTGACTCTG
CCGATGAGGCAGACAAGTCGCGGTCCCGCAAGTCTAGCGTCCGCAAGCGT
GCTCAGCTATGGATGACCAAGGGAGGTCTTGTCCGTGACGACTCCGACGA
CGAACTCGGCGAGGAAGACCACCCGTGGGAGTGGATCTATGACCACAACG
ACGAGAACAACAAAGAAAGCGAGCAGGCGACTACAGAAGATACCCCGAAA
TCGAGCCGAAGACGCACCCCTCGCCCCAATGCCAAACGCCGCCGGACTAT
TGTCGGAGCTCGGATGGGCTCGTTCGAATGCGCCTTGGGCCAGGTGGTGC
TTTTGAAATCCCCAGAACCAGGCAAAGATTGGATTGGCATTATAACGGAA
TTCGTAGAACAGGAGGATCCGGATGCTGAGGACGAGATCATCAAATCGGC
GAACATCATGTGGTTTGCTTCCCCGGATGAGTTCATGTCAACCCGGAACA
AGCGACGAGCCGACGCTTTGCCCAACGAGCAATACCTGACTGCCGATTTT
AACGTCAATCCTCTTACGTCGATCAGTGGCAAAGCTACGGTAATGTCCAA
GGATGCATTCTACGCCAGGTACCCAGACGGTGCTCCCCCGAAAGGAAAAG
AGGCCCTCGCGGAGTTCAACAAGTGCATTGTTGTTCGGAGAGGAGTAAAC
CAGCTGCAAGGACGTTATACGGAAGAGTTTGTCTGGGAGGACGTATACCG
TGAGGATAGGGTCTTTGATCTCATCACCTTGATTAAGGATGGGTTGAAAG
CAGCCAAAAAGCGCAAGCAAGTCGACGACGACGTGAGTGATGTTCCTGAT
TGGTGGTGGATTCATGGTGCTAACGTATGTTGGAGTATGATGACAAGAAG
GACGACACCAAGGAAGAGGATGACTTTGTCCCCACCACACCTAGGAAAAG
GCAGAAGGTGGCTACAAACGCTACTCCCCAATCGCGGCGTCAAAAGACCT
TTACCACCCCAGCTCATAAGAGGTAGGCAAACAAGCTCCTCCAACCAGAT
ATCGGCTAACGTATCCCGACAGGATCGTCGTCAAGAAGCCTCTCGAATTT
ACACCTCTCGGTACTCGTATTCTTTCACCCACTCATTTCGCCTCCCCGTA
CCGCCAGGCGCGCACGTTGCTGCACGTTTCCACCGTGCCTACATCGCTTC
CATGCCGAAAAACGGAGTTCGAAACAGTGTATAGTCATCTCAGTGCCGCG
ATCATGGAAGGGACAGGGGCTTGCATCTACATATCAGGAACGCCGGGTAC
TGGAAAGACAGCAACGGTCCGCGAAGTCGTTTCGCAATTGAATTCGGCTG
TGTTGGCAGAAGAGATGGACGATTTTATTTTCGTTGAAATCAACGGCATG
AAGGTCACCGATCCTCACCAATCTTACTCGCTGCTCTGGCAAGCGCTCAA
GGGTGACCGAGTATCGCCTTCACATGCTCTCGACCTTCTTGAGCGGGAGT
TCTCACATCCATCCCCGCGACGAGTGTCCTGCGTCGTTCTTATGGACGAG
CTCGATCAGCTTGTCACAAAGAATCAGTCTGTGATGTACAACTTCTTCAA
CTGGCCGGCGCTCCGCCACTCTCGCCTTATTGTCTTGGCTGTCGCAAACA
CCATGGATCTTCCAGAACGTACGCTCAGCAACAAAATCTCCAGTCGCCTG
GGTCTCACCCGTATCACCTTCCCCGGATATAAGCACACTGATCTGATGGA
AATCATCAGCACCCGCTTAGCCAACGTACCAGGGAATATCGTCGACGCGG
ACGCCATCCAATTCGCCAGTCGCAAGGTAGCCGCCGTTAGTGGTGATGCC
CGACGTGCCCTGGACATCTGCCGACGCGCCGTCGAAATCGCCGAACAGGC
CAGCGAAGCAGCAGCCCAAGACCCAGACACAGACAAACCCGATGCAGACG
ACACCGAATCCCTACCCCCAACACCCAGCAAGACCCCAGCCCGCAGAGAA
AGATCCCTCAAACAATCCGCCCAGTCCTCCCCTCAAAAGAAACCACCCAC
CAAACCACAAACCGTCGGTCGTGTCACCATCGCCACAATCAAACAGGCCA
TTCACGAAGCCACTTCAACTCCTCTCCAACAGTCCCTCCGCTGTCTTCCC
CTCGCCGCTAAGCTCTTCCTCGCCGCCATGCTAGCCCGGGTCCGACGCAC
CGGTATCTCTGAATCAGCATTCGGCGACGTAATCGACGAAGCCAAACGAA
TCGCCGATGCGGCCGTGGCTGTGGCCGGAGCAGCAGGCGCCGGTGTCAAA
GACTTCCTGCTAGCCGGAGGGACCGGCGCTCGCGTACGAGCTTTGGGCTA
CGCCGCAATGGAACTGACGAACTCGGGCGTCCTCGCTCTGGAATATGGAG
CCGGCGCCAGGGGACCCCTAGGTAGCGCTGCTATTCCGCATCGTGGCGAT
CGTAGCGGAAAAGTACGACTCCGTATCGCTGCAGAAGATGTCAAGATTGC
TTTTCGCGAGGATGAGGAAGCCAAGGGGCTTGGATTGGGCTTGGATCAGT
GATTACCACTCACTATAGTCGTGACCATCTAGATGATACATTACTTACTG
TATAAGAACAATGATACCC back to topCoding sequence (CDS) from alignment at ch8:2344926..2347644- >KJC3_012024-T1 ID=KJC3_012024-T1|Name=KJC3_012024-T1|organism=Aspergillus niger KJC3|type=CDS|length=7245bp|location=Sequence derived from alignment at ch8:2344926..2347644- (Aspergillus niger KJC3)
GATCGTCGTCAAGAAGCCTCTCGAATTTACACCTCTCGGTACTCGTATTC
TTTCACCCACTCATTTCGCCTCCCCGTACCGCCAGGCGCGCACGTTGCTG
CACGTTTCCACCGTGCCTACATCGCTTCCATGCCGAAAAACGGAGTTCGA
AACAGTGTATAGTCATCTCAGTGCCGCGATCATGGAAGGGACAGGGGCTT
GCATCTACATATCAGGAACGCCGGGTACTGGAAAGACAGCAACGGTCCGC
GAAGTCGTTTCGCAATTGAATTCGGCTGTGTTGGCAGAAGAGATGGACGA
TTTTATTTTCGTTGAAATCAACGGCATGAAGGTCACCGATCCTCACCAAT
CTTACTCGCTGCTCTGGCAAGCGCTCAAGGGTGACCGAGTATCGCCTTCA
CATGCTCTCGACCTTCTTGAGCGGGAGTTCTCACATCCATCCCCGCGACG
AGTGTCCTGCGTCGTTCTTATGGACGAGCTCGATCAGCTTGTCACAAAGA
ATCAGTCTGTGATGTACAACTTCTTCAACTGGCCGGCGCTCCGCCACTCT
CGCCTTATTGTCTTGGCTGTCGCAAACACCATGGATCTTCCAGAACGTAC
GCTCAGCAACAAAATCTCCAGTCGCCTGGGTCTCACCCGTATCACCTTCC
CCGGATATAAGCACACTGATCTGATGGAAATCATCAGCACCCGCTTAGCC
AACGTACCAGGGAATATCGTCGACGCGGACGCCATCCAATTCGCCAGTCG
CAAGGTAGCCGCCGTTAGTGGTGATGCCCGACGTGCCCTGGACATCTGCC
GACGCGCCGTCGAAATCGCCGAACAGGCCAGCGAAGCAGCAGCCCAAGAC
CCAGACACAGACAAACCCGATGCAGACGACACCGAATCCCTACCCCCAAC
ACCCAGCAAGACCCCAGCCCGCAGAGAAAGATCCCTCAAACAATCCGCCC
AGTCCTCCCCTCAAAAGAAACCACCCACCAAACCACAAACCGTCGGTCGT
GTCACCATCGCCACAATCAAACAGGCCATTCACGAAGCCACTTCAACTCC
TCTCCAACAGTCCCTCCGCTGTCTTCCCCTCGCCGCTAAGCTCTTCCTCG
CCGCCATGCTAGCCCGGGTCCGACGCACCGGTATCTCTGAATCAGCATTC
GGCGACGTAATCGACGAAGCCAAACGAATCGCCGATGCGGCCGTGGCTGT
GGCCGGAGCAGCAGGCGCCGGTGTCAAAGACTTCCTGCTAGCCGGAGGGA
CCGGCGCTCGCGTACGAGCTTTGGGCTACGCCGCAATGGAACTGACGAAC
TCGGGCGTCCTCGCTCTGGAATATGGAGCCGGCGCCAGGGGACCCCTAGG
TAGCGCTGCTATTCCGCATCGTGGCGATCGTAGCGGAAAAGTACGACTCC
GTATCGCTGCAGAAGATGTCAAGATTGCTTTTCGCGAGGATGAGGAAGCC
AAGGGGCTTGGATTGGGCTTGGATCAGTGATATGATGACAAGAAGGACGA
CACCAAGGAAGAGGATGACTTTGTCCCCACCACACCTAGGAAAAGGCAGA
AGGTGGCTACAAACGCTACTCCCCAATCGCGGCGTCAAAAGACCTTTACC
ACCCCAGCTCATAAGAGATGGCTTCTGACTCTGCCGATGAGGCAGACAAG
TCGCGGTCCCGCAAGTCTAGCGTCCGCAAGCGTGCTCAGCTATGGATGAC
CAAGGGAGGTCTTGTCCGTGACGACTCCGACGACGAACTCGGCGAGGAAG
ACCACCCGTGGGAGTGGATCTATGACCACAACGACGAGAACAACAAAGAA
AGCGAGCAGGCGACTACAGAAGATACCCCGAAATCGAGCCGAAGACGCAC
CCCTCGCCCCAATGCCAAACGCCGCCGGACTATTGTCGGAGCTCGGATGG
GCTCGTTCGAATGCGCCTTGGGCCAGGTGGTGCTTTTGAAATCCCCAGAA
CCAGGCAAAGATTGGATTGGCATTATAACGGAATTCGTAGAACAGGAGGA
TCCGGATGCTGAGGACGAGATCATCAAATCGGCGAACATCATGTGGTTTG
CTTCCCCGGATGAGTTCATGTCAACCCGGAACAAGCGACGAGCCGACGCT
TTGCCCAACGAGCAATACCTGACTGCCGATTTTAACGTCAATCCTCTTAC
GTCGATCAGTGGCAAAGCTACGGTAATGTCCAAGGATGCATTCTACGCCA
GGTACCCAGACGGTGCTCCCCCGAAAGGAAAAGAGGCCCTCGCGGAGTTC
AACAAGTGCATTGTTGTTCGGAGAGGAGTAAACCAGCTGCAAGGACGTTA
TACGGAAGAGTTTGTCTGGGAGGACGTATACCGTGAGGATAGGGTCTTTG
ATCTCATCACCTTGATTAAGGATGGGTTGAAAGCAGCCAAAAAGCGCAAG
CAAGTCGACGACGACGATCGTCGTCAAGAAGCCTCTCGAATTTACACCTC
TCGGTACTCGTATTCTTTCACCCACTCATTTCGCCTCCCCGTACCGCCAG
GCGCGCACGTTGCTGCACGTTTCCACCGTGCCTACATCGCTTCCATGCCG
AAAAACGGAGTTCGAAACAGTGTATAGTCATCTCAGTGCCGCGATCATGG
AAGGGACAGGGGCTTGCATCTACATATCAGGAACGCCGGGTACTGGAAAG
ACAGCAACGGTCCGCGAAGTCGTTTCGCAATTGAATTCGGCTGTGTTGGC
AGAAGAGATGGACGATTTTATTTTCGTTGAAATCAACGGCATGAAGGTCA
CCGATCCTCACCAATCTTACTCGCTGCTCTGGCAAGCGCTCAAGGGTGAC
CGAGTATCGCCTTCACATGCTCTCGACCTTCTTGAGCGGGAGTTCTCACA
TCCATCCCCGCGACGAGTGTCCTGCGTCGTTCTTATGGACGAGCTCGATC
AGCTTGTCACAAAGAATCAGTCTGTGATGTACAACTTCTTCAACTGGCCG
GCGCTCCGCCACTCTCGCCTTATTGTCTTGGCTGTCGCAAACACCATGGA
TCTTCCAGAACGTACGCTCAGCAACAAAATCTCCAGTCGCCTGGGTCTCA
CCCGTATCACCTTCCCCGGATATAAGCACACTGATCTGATGGAAATCATC
AGCACCCGCTTAGCCAACGTACCAGGGAATATCGTCGACGCGGACGCCAT
CCAATTCGCCAGTCGCAAGGTAGCCGCCGTTAGTGGTGATGCCCGACGTG
CCCTGGACATCTGCCGACGCGCCGTCGAAATCGCCGAACAGGCCAGCGAA
GCAGCAGCCCAAGACCCAGACACAGACAAACCCGATGCAGACGACACCGA
ATCCCTACCCCCAACACCCAGCAAGACCCCAGCCCGCAGAGAAAGATCCC
TCAAACAATCCGCCCAGTCCTCCCCTCAAAAGAAACCACCCACCAAACCA
CAAACCGTCGGTCGTGTCACCATCGCCACAATCAAACAGGCCATTCACGA
AGCCACTTCAACTCCTCTCCAACAGTCCCTCCGCTGTCTTCCCCTCGCCG
CTAAGCTCTTCCTCGCCGCCATGCTAGCCCGGGTCCGACGCACCGGTATC
TCTGAATCAGCATTCGGCGACGTAATCGACGAAGCCAAACGAATCGCCGA
TGCGGCCGTGGCTGTGGCCGGAGCAGCAGGCGCCGGTGTCAAAGACTTCC
TGCTAGCCGGAGGGACCGGCGCTCGCGTACGAGCTTTGGGCTACGCCGCA
ATGGAACTGACGAACTCGGGCGTCCTCGCTCTGGAATATGGAGCCGGCGC
CAGGGGACCCCTAGGTAGCGCTGCTATTCCGCATCGTGGCGATCGTAGCG
GAAAAGTACGACTCCGTATCGCTGCAGAAGATGTCAAGATTGCTTTTCGC
GAGGATGAGGAAGCCAAGGGGCTTGGATTGGGCTTGGATCAGTGATATGA
TGACAAGAAGGACGACACCAAGGAAGAGGATGACTTTGTCCCCACCACAC
CTAGGAAAAGGCAGAAGGTGGCTACAAACGCTACTCCCCAATCGCGGCGT
CAAAAGACCTTTACCACCCCAGCTCATAAGAGATGGCTTCTGACTCTGCC
GATGAGGCAGACAAGTCGCGGTCCCGCAAGTCTAGCGTCCGCAAGCGTGC
TCAGCTATGGATGACCAAGGGAGGTCTTGTCCGTGACGACTCCGACGACG
AACTCGGCGAGGAAGACCACCCGTGGGAGTGGATCTATGACCACAACGAC
GAGAACAACAAAGAAAGCGAGCAGGCGACTACAGAAGATACCCCGAAATC
GAGCCGAAGACGCACCCCTCGCCCCAATGCCAAACGCCGCCGGACTATTG
TCGGAGCTCGGATGGGCTCGTTCGAATGCGCCTTGGGCCAGGTGGTGCTT
TTGAAATCCCCAGAACCAGGCAAAGATTGGATTGGCATTATAACGGAATT
CGTAGAACAGGAGGATCCGGATGCTGAGGACGAGATCATCAAATCGGCGA
ACATCATGTGGTTTGCTTCCCCGGATGAGTTCATGTCAACCCGGAACAAG
CGACGAGCCGACGCTTTGCCCAACGAGCAATACCTGACTGCCGATTTTAA
CGTCAATCCTCTTACGTCGATCAGTGGCAAAGCTACGGTAATGTCCAAGG
ATGCATTCTACGCCAGGTACCCAGACGGTGCTCCCCCGAAAGGAAAAGAG
GCCCTCGCGGAGTTCAACAAGTGCATTGTTGTTCGGAGAGGAGTAAACCA
GCTGCAAGGACGTTATACGGAAGAGTTTGTCTGGGAGGACGTATACCGTG
AGGATAGGGTCTTTGATCTCATCACCTTGATTAAGGATGGGTTGAAAGCA
GCCAAAAAGCGCAAGCAAGTCGACGACGACGATCGTCGTCAAGAAGCCTC
TCGAATTTACACCTCTCGGTACTCGTATTCTTTCACCCACTCATTTCGCC
TCCCCGTACCGCCAGGCGCGCACGTTGCTGCACGTTTCCACCGTGCCTAC
ATCGCTTCCATGCCGAAAAACGGAGTTCGAAACAGTGTATAGTCATCTCA
GTGCCGCGATCATGGAAGGGACAGGGGCTTGCATCTACATATCAGGAACG
CCGGGTACTGGAAAGACAGCAACGGTCCGCGAAGTCGTTTCGCAATTGAA
TTCGGCTGTGTTGGCAGAAGAGATGGACGATTTTATTTTCGTTGAAATCA
ACGGCATGAAGGTCACCGATCCTCACCAATCTTACTCGCTGCTCTGGCAA
GCGCTCAAGGGTGACCGAGTATCGCCTTCACATGCTCTCGACCTTCTTGA
GCGGGAGTTCTCACATCCATCCCCGCGACGAGTGTCCTGCGTCGTTCTTA
TGGACGAGCTCGATCAGCTTGTCACAAAGAATCAGTCTGTGATGTACAAC
TTCTTCAACTGGCCGGCGCTCCGCCACTCTCGCCTTATTGTCTTGGCTGT
CGCAAACACCATGGATCTTCCAGAACGTACGCTCAGCAACAAAATCTCCA
GTCGCCTGGGTCTCACCCGTATCACCTTCCCCGGATATAAGCACACTGAT
CTGATGGAAATCATCAGCACCCGCTTAGCCAACGTACCAGGGAATATCGT
CGACGCGGACGCCATCCAATTCGCCAGTCGCAAGGTAGCCGCCGTTAGTG
GTGATGCCCGACGTGCCCTGGACATCTGCCGACGCGCCGTCGAAATCGCC
GAACAGGCCAGCGAAGCAGCAGCCCAAGACCCAGACACAGACAAACCCGA
TGCAGACGACACCGAATCCCTACCCCCAACACCCAGCAAGACCCCAGCCC
GCAGAGAAAGATCCCTCAAACAATCCGCCCAGTCCTCCCCTCAAAAGAAA
CCACCCACCAAACCACAAACCGTCGGTCGTGTCACCATCGCCACAATCAA
ACAGGCCATTCACGAAGCCACTTCAACTCCTCTCCAACAGTCCCTCCGCT
GTCTTCCCCTCGCCGCTAAGCTCTTCCTCGCCGCCATGCTAGCCCGGGTC
CGACGCACCGGTATCTCTGAATCAGCATTCGGCGACGTAATCGACGAAGC
CAAACGAATCGCCGATGCGGCCGTGGCTGTGGCCGGAGCAGCAGGCGCCG
GTGTCAAAGACTTCCTGCTAGCCGGAGGGACCGGCGCTCGCGTACGAGCT
TTGGGCTACGCCGCAATGGAACTGACGAACTCGGGCGTCCTCGCTCTGGA
ATATGGAGCCGGCGCCAGGGGACCCCTAGGTAGCGCTGCTATTCCGCATC
GTGGCGATCGTAGCGGAAAAGTACGACTCCGTATCGCTGCAGAAGATGTC
AAGATTGCTTTTCGCGAGGATGAGGAAGCCAAGGGGCTTGGATTGGGCTT
GGATCAGTGATATGATGACAAGAAGGACGACACCAAGGAAGAGGATGACT
TTGTCCCCACCACACCTAGGAAAAGGCAGAAGGTGGCTACAAACGCTACT
CCCCAATCGCGGCGTCAAAAGACCTTTACCACCCCAGCTCATAAGAGATG
GCTTCTGACTCTGCCGATGAGGCAGACAAGTCGCGGTCCCGCAAGTCTAG
CGTCCGCAAGCGTGCTCAGCTATGGATGACCAAGGGAGGTCTTGTCCGTG
ACGACTCCGACGACGAACTCGGCGAGGAAGACCACCCGTGGGAGTGGATC
TATGACCACAACGACGAGAACAACAAAGAAAGCGAGCAGGCGACTACAGA
AGATACCCCGAAATCGAGCCGAAGACGCACCCCTCGCCCCAATGCCAAAC
GCCGCCGGACTATTGTCGGAGCTCGGATGGGCTCGTTCGAATGCGCCTTG
GGCCAGGTGGTGCTTTTGAAATCCCCAGAACCAGGCAAAGATTGGATTGG
CATTATAACGGAATTCGTAGAACAGGAGGATCCGGATGCTGAGGACGAGA
TCATCAAATCGGCGAACATCATGTGGTTTGCTTCCCCGGATGAGTTCATG
TCAACCCGGAACAAGCGACGAGCCGACGCTTTGCCCAACGAGCAATACCT
GACTGCCGATTTTAACGTCAATCCTCTTACGTCGATCAGTGGCAAAGCTA
CGGTAATGTCCAAGGATGCATTCTACGCCAGGTACCCAGACGGTGCTCCC
CCGAAAGGAAAAGAGGCCCTCGCGGAGTTCAACAAGTGCATTGTTGTTCG
GAGAGGAGTAAACCAGCTGCAAGGACGTTATACGGAAGAGTTTGTCTGGG
AGGACGTATACCGTGAGGATAGGGTCTTTGATCTCATCACCTTGATTAAG
GATGGGTTGAAAGCAGCCAAAAAGCGCAAGCAAGTCGACGACGAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003682 | chromatin binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012024-T1.utr3p1 | KJC3_012024-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012024-T1.utr5p1 | KJC3_012024-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR001025 |
| DBxref | InterPro:IPR003959 |
| DBxref | InterPro:IPR041083 |
| DBxref | InterPro:IPR043151 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF13401 |
| DBxref | PFAM:PF13191 |
| DBxref | PFAM:PF00004 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2344926..2347644 - |
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