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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2364218..2366942+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012030-T1 ID=KJC3_012030-T1|Name=KJC3_012030-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2725bp|location=Sequence derived from alignment at ch8:2364218..2366942+ (Aspergillus niger KJC3)
GTACTTTTTCGCTCAGTTCTTTCAATCTGCTCGTGTTCACAAGCTTAGCA
CGTCATTTCTCACTTTTTCATCTAGATTTTTGCCTTGGGTGATTTTGGGA
TTCTTTGTCGCGCATATCGCCCCCCCTGGTCTTGTAGTGTCGATCTGCCT
CACGGTTATCTCTAGTAAGTATTAGGCTGCCCGCACGTGCCTTGGCCAGT
GATATTCTTTTCTAGCCTGAACCTGACAACTAAAAAGATGTTAGATCCTT
CCTCCGTTCTTCTTCTCGCTCTTCTCTCGCCTTCCGTTACTCGCCTCGTT
AATTCTCCTTCACTCGCTACCTGTCTTCGCGAAGGCAGTTCCTGATCTAC
TATCGGCCACCTCTGATTCTCCCAGAGCTATCTTTAACAATTTTAACCTC
AGTGTTGTGAAGTCGTCCTATTTTGTCGCATCTAAAGGCGCAGTACATGC
ATCCGAAGGCCTTCAGTGTCTCTTCTTCCTTTAGCTTCATCGCTTCCTAT
CACCTGCGGCTTGTCCGCTCGTTAAAATGGCGGAGTCCAACACTTTCAAG
CCCGTCGTTTCCCGCCGGTCGTCTGTCTCCGACAATGCCAGTGCAGCAGA
TAAGTTGAAGCAGATGGATTTGGAAAATCAGAAACAGCAGGTGGGCTCTG
GCTCAGACACGGAGGGGGAAATCGGCCGTCAGATTGAAATGGAATCGGAG
AATTCCATTAAATACCGTACCTGTAGTTGGCAGAAGGTATGTACTACAAT
CCACTTCGGAGCGGTGTACGCGCGCGATGCGCGCATAGTTGCAATGGCTA
ATCACAGACCTGTGTTTACTAGACGGCCGCCCTCCTGTTCTCCGAGTATA
TTTGTCTGGCTATCATGTCATTTCCATGGTCCTATTCCGTTCTCGGCTTG
GTCCCGGGGTTGATCCTCACAGTCGTCATCGCCATGATCGTACTTTATAC
ATCGCTGGTTATTTGGTATGTGTTTTCCATTGTCGCATCGCTCGTTGAGG
TCCCCGCTCATATCGTGTAGGAAGTTTTGTCTGCGACACCCACATGTCCG
TGACGTGTGCGACATCGGCCAAATGATATTCTGGGACTCCAAGATTGTAT
GGTATCTGACTGCAATCATGTTCCTGCTGAACAATACCTTTATTCAGGTA
CTTTCCTTGGGTTTGCCAAGTAATCTACAGCGCTGACATGGATTAGGGCT
TGCATTGTTTGGTCGGCGCCGAGTATCTCAACACTATCAGTGGCCATGGA
GCCTGCACCATTATCTTCTCGCTTGTCACGGCGATCATCTCGCTGATCTG
CTCCCTTCCACGCACCTTCAGCGCTCTATCCAAGGTGGCGACCCTGTCGG
CATTTACCACATTCATTTCCGTCATGCTAGCCCTCATTTTCTCTGCCATT
GAGGACCATCCCGCGGGCTATACCCCGGAGATGGGAGATCCCATTGTGAA
AGCGATCCCTGTGCCTGGAACGACCTTTGTATCAGGAATGAGCGCCTTCC
TCAATATCAGTTACACCTTCATTGGACAGATCACCCTGCCAAGCTTTATC
GCCGAGATGAAAGAACCCAAGGATTTCTGGAAGTCTGTCACCGCCGTCAC
TATCGCCGAGATCATCGTGTTCAGCTTGGTCGGTTCTATCGTGTACGCCT
ACACCGGTAACCAGTACATCACGTCGCCGGCATTCGGCTCTCTGGGTAAC
GAGGTATACAAAAAGGTGTCCTTCTCGTTCATGATCCCGACGTTGGTTTT
CCTCGGCGTGCTGTATGCCTCCGTGTCGGCGCGTTTCATCTTCTTCCGCT
TGTTCGATGGCACCCGCCACAAGGGTAACCACACCGTACTCGGATGGGCC
GCCTGGACCGGTATCCTCACCATCCTTTGGATCCTCGCCTTCATCATCGC
CGAGGTGATTCCCTTCTTTTCCGACCTGGAGTCGATCATGAGCTCCCTCT
TTGATTCATTTTTCGGCTTCATCTTCTGGGGCACGGCCTACCTGCGCATG
CGTCGGGAGGACTATGGACCCAATTTCTACAAGAACCGTGGCATCCGCGG
CTGGCTCGGCGCGATTCTCAATGTTACTCTCATTCTCGCTGGGTTCTTTT
TCCTCGGACCAGGAACTTATGTGAGTCCTCTTCCTTTCTCCGGACATACC
TAGCCGCAAACCGAAACTAACAAAATCCCACTAGGCATCCATTGAGAGTG
TCATTATCAGCTACCGAGAAGGCACTGTCGGCACTCCCTTCTCCTGCGCC
AACACGGGACTGTAGGTACAGGATCAACCATCTTGAGATGAAATAGCTTC
AGGGCTGGCACCACAGACAAAAACGGGAAATGATGATTTCTTCACGAGTA
CTTTCCACCATATCAACGACTACTCTTTTCTCTGCTTATTAGTTTTATTA
TTGTTTGACATACCCATTGTTATGCTACTACCACTGTTTGTCGTCTACGA
AAAAAAGAATGTGAAATTCATCACTGGCCGGTTGCCGGAATATGCTGATC
GCGTCCTTCGGACTATCAGGAAGTTTATGAGAGGGGATGATGGGATGGAA
AGGGGTGGGGTTTATATATATGTGTGTTTGATCTGGTAAGGTTCTCACAC
TTCAGGAACGACTAGTAGTTTTAGTCTAGTATTAGGTAGTTCTTAATTTT
GTCCGGCTGGGGCAATGTAAGTGTATTTCAGTTAGCACATAGAGATGGAT
GGTAGGACCAAGATGAATAGAGGTG back to topCoding sequence (CDS) from alignment at ch8:2364218..2366942+ >KJC3_012030-T1 ID=KJC3_012030-T1|Name=KJC3_012030-T1|organism=Aspergillus niger KJC3|type=CDS|length=7425bp|location=Sequence derived from alignment at ch8:2364218..2366942+ (Aspergillus niger KJC3)
ATGGCGGAGTCCAACACTTTCAAGCCCGTCGTTTCCCGCCGGTCGTCTGT
CTCCGACAATGCCAGTGCAGCAGATAAGTTGAAGCAGATGGATTTGGAAA
ATCAGAAACAGCAGGTGGGCTCTGGCTCAGACACGGAGGGGGAAATCGGC
CGTCAGATTGAAATGGAATCGGAGAATTCCATTAAATACCGTACCTGTAG
TTGGCAGAAGACGGCCGCCCTCCTGTTCTCCGAGTATATTTGTCTGGCTA
TCATGTCATTTCCATGGTCCTATTCCGTTCTCGGCTTGGTCCCGGGGTTG
ATCCTCACAGTCGTCATCGCCATGATCGTACTTTATACATCGCTGGTTAT
TTGGAAGTTTTGTCTGCGACACCCACATGTCCGTGACGTGTGCGACATCG
GCCAAATGATATTCTGGGACTCCAAGATTGTATGGTATCTGACTGCAATC
ATGTTCCTGCTGAACAATACCTTTATTCAGGGCTTGCATTGTTTGGTCGG
CGCCGAGTATCTCAACACTATCAGTGGCCATGGAGCCTGCACCATTATCT
TCTCGCTTGTCACGGCGATCATCTCGCTGATCTGCTCCCTTCCACGCACC
TTCAGCGCTCTATCCAAGGTGGCGACCCTGTCGGCATTTACCACATTCAT
TTCCGTCATGCTAGCCCTCATTTTCTCTGCCATTGAGGACCATCCCGCGG
GCTATACCCCGGAGATGGGAGATCCCATTGTGAAAGCGATCCCTGTGCCT
GGAACGACCTTTGTATCAGGAATGAGCGCCTTCCTCAATATCAGTTACAC
CTTCATTGGACAGATCACCCTGCCAAGCTTTATCGCCGAGATGAAAGAAC
CCAAGGATTTCTGGAAGTCTGTCACCGCCGTCACTATCGCCGAGATCATC
GTGTTCAGCTTGGTCGGTTCTATCGTGTACGCCTACACCGGTAACCAGTA
CATCACGTCGCCGGCATTCGGCTCTCTGGGTAACGAGGTATACAAAAAGG
TGTCCTTCTCGTTCATGATCCCGACGTTGGTTTTCCTCGGCGTGCTGTAT
GCCTCCGTGTCGGCGCGTTTCATCTTCTTCCGCTTGTTCGATGGCACCCG
CCACAAGGGTAACCACACCGTACTCGGATGGGCCGCCTGGACCGGTATCC
TCACCATCCTTTGGATCCTCGCCTTCATCATCGCCGAGGTGATTCCCTTC
TTTTCCGACCTGGAGTCGATCATGAGCTCCCTCTTTGATTCATTTTTCGG
CTTCATCTTCTGGGGCACGGCCTACCTGCGCATGCGTCGGGAGGACTATG
GACCCAATTTCTACAAGAACCGTGGCATCCGCGGCTGGCTCGGCGCGATT
CTCAATGTTACTCTCATTCTCGCTGGGTTCTTTTTCCTCGGACCAGGAAC
TTATGCATCCATTGAGAGTGTCATTATCAGCTACCGAGAAGGCACTGTCG
GCACTCCCTTCTCCTGCGCCAACACGGGACTGTAGATGGCGGAGTCCAAC
ACTTTCAAGCCCGTCGTTTCCCGCCGGTCGTCTGTCTCCGACAATGCCAG
TGCAGCAGATAAGTTGAAGCAGATGGATTTGGAAAATCAGAAACAGCAGG
TGGGCTCTGGCTCAGACACGGAGGGGGAAATCGGCCGTCAGATTGAAATG
GAATCGGAGAATTCCATTAAATACCGTACCTGTAGTTGGCAGAAGACGGC
CGCCCTCCTGTTCTCCGAGTATATTTGTCTGGCTATCATGTCATTTCCAT
GGTCCTATTCCGTTCTCGGCTTGGTCCCGGGGTTGATCCTCACAGTCGTC
ATCGCCATGATCGTACTTTATACATCGCTGGTTATTTGGAAGTTTTGTCT
GCGACACCCACATGTCCGTGACGTGTGCGACATCGGCCAAATGATATTCT
GGGACTCCAAGATTGTATGGTATCTGACTGCAATCATGTTCCTGCTGAAC
AATACCTTTATTCAGGGCTTGCATTGTTTGGTCGGCGCCGAGTATCTCAA
CACTATCAGTGGCCATGGAGCCTGCACCATTATCTTCTCGCTTGTCACGG
CGATCATCTCGCTGATCTGCTCCCTTCCACGCACCTTCAGCGCTCTATCC
AAGGTGGCGACCCTGTCGGCATTTACCACATTCATTTCCGTCATGCTAGC
CCTCATTTTCTCTGCCATTGAGGACCATCCCGCGGGCTATACCCCGGAGA
TGGGAGATCCCATTGTGAAAGCGATCCCTGTGCCTGGAACGACCTTTGTA
TCAGGAATGAGCGCCTTCCTCAATATCAGTTACACCTTCATTGGACAGAT
CACCCTGCCAAGCTTTATCGCCGAGATGAAAGAACCCAAGGATTTCTGGA
AGTCTGTCACCGCCGTCACTATCGCCGAGATCATCGTGTTCAGCTTGGTC
GGTTCTATCGTGTACGCCTACACCGGTAACCAGTACATCACGTCGCCGGC
ATTCGGCTCTCTGGGTAACGAGGTATACAAAAAGGTGTCCTTCTCGTTCA
TGATCCCGACGTTGGTTTTCCTCGGCGTGCTGTATGCCTCCGTGTCGGCG
CGTTTCATCTTCTTCCGCTTGTTCGATGGCACCCGCCACAAGGGTAACCA
CACCGTACTCGGATGGGCCGCCTGGACCGGTATCCTCACCATCCTTTGGA
TCCTCGCCTTCATCATCGCCGAGGTGATTCCCTTCTTTTCCGACCTGGAG
TCGATCATGAGCTCCCTCTTTGATTCATTTTTCGGCTTCATCTTCTGGGG
CACGGCCTACCTGCGCATGCGTCGGGAGGACTATGGACCCAATTTCTACA
AGAACCGTGGCATCCGCGGCTGGCTCGGCGCGATTCTCAATGTTACTCTC
ATTCTCGCTGGGTTCTTTTTCCTCGGACCAGGAACTTATGCATCCATTGA
GAGTGTCATTATCAGCTACCGAGAAGGCACTGTCGGCACTCCCTTCTCCT
GCGCCAACACGGGACTGTAGATGGCGGAGTCCAACACTTTCAAGCCCGTC
GTTTCCCGCCGGTCGTCTGTCTCCGACAATGCCAGTGCAGCAGATAAGTT
GAAGCAGATGGATTTGGAAAATCAGAAACAGCAGGTGGGCTCTGGCTCAG
ACACGGAGGGGGAAATCGGCCGTCAGATTGAAATGGAATCGGAGAATTCC
ATTAAATACCGTACCTGTAGTTGGCAGAAGACGGCCGCCCTCCTGTTCTC
CGAGTATATTTGTCTGGCTATCATGTCATTTCCATGGTCCTATTCCGTTC
TCGGCTTGGTCCCGGGGTTGATCCTCACAGTCGTCATCGCCATGATCGTA
CTTTATACATCGCTGGTTATTTGGAAGTTTTGTCTGCGACACCCACATGT
CCGTGACGTGTGCGACATCGGCCAAATGATATTCTGGGACTCCAAGATTG
TATGGTATCTGACTGCAATCATGTTCCTGCTGAACAATACCTTTATTCAG
GGCTTGCATTGTTTGGTCGGCGCCGAGTATCTCAACACTATCAGTGGCCA
TGGAGCCTGCACCATTATCTTCTCGCTTGTCACGGCGATCATCTCGCTGA
TCTGCTCCCTTCCACGCACCTTCAGCGCTCTATCCAAGGTGGCGACCCTG
TCGGCATTTACCACATTCATTTCCGTCATGCTAGCCCTCATTTTCTCTGC
CATTGAGGACCATCCCGCGGGCTATACCCCGGAGATGGGAGATCCCATTG
TGAAAGCGATCCCTGTGCCTGGAACGACCTTTGTATCAGGAATGAGCGCC
TTCCTCAATATCAGTTACACCTTCATTGGACAGATCACCCTGCCAAGCTT
TATCGCCGAGATGAAAGAACCCAAGGATTTCTGGAAGTCTGTCACCGCCG
TCACTATCGCCGAGATCATCGTGTTCAGCTTGGTCGGTTCTATCGTGTAC
GCCTACACCGGTAACCAGTACATCACGTCGCCGGCATTCGGCTCTCTGGG
TAACGAGGTATACAAAAAGGTGTCCTTCTCGTTCATGATCCCGACGTTGG
TTTTCCTCGGCGTGCTGTATGCCTCCGTGTCGGCGCGTTTCATCTTCTTC
CGCTTGTTCGATGGCACCCGCCACAAGGGTAACCACACCGTACTCGGATG
GGCCGCCTGGACCGGTATCCTCACCATCCTTTGGATCCTCGCCTTCATCA
TCGCCGAGGTGATTCCCTTCTTTTCCGACCTGGAGTCGATCATGAGCTCC
CTCTTTGATTCATTTTTCGGCTTCATCTTCTGGGGCACGGCCTACCTGCG
CATGCGTCGGGAGGACTATGGACCCAATTTCTACAAGAACCGTGGCATCC
GCGGCTGGCTCGGCGCGATTCTCAATGTTACTCTCATTCTCGCTGGGTTC
TTTTTCCTCGGACCAGGAACTTATGCATCCATTGAGAGTGTCATTATCAG
CTACCGAGAAGGCACTGTCGGCACTCCCTTCTCCTGCGCCAACACGGGAC
TGTAGATGGCGGAGTCCAACACTTTCAAGCCCGTCGTTTCCCGCCGGTCG
TCTGTCTCCGACAATGCCAGTGCAGCAGATAAGTTGAAGCAGATGGATTT
GGAAAATCAGAAACAGCAGGTGGGCTCTGGCTCAGACACGGAGGGGGAAA
TCGGCCGTCAGATTGAAATGGAATCGGAGAATTCCATTAAATACCGTACC
TGTAGTTGGCAGAAGACGGCCGCCCTCCTGTTCTCCGAGTATATTTGTCT
GGCTATCATGTCATTTCCATGGTCCTATTCCGTTCTCGGCTTGGTCCCGG
GGTTGATCCTCACAGTCGTCATCGCCATGATCGTACTTTATACATCGCTG
GTTATTTGGAAGTTTTGTCTGCGACACCCACATGTCCGTGACGTGTGCGA
CATCGGCCAAATGATATTCTGGGACTCCAAGATTGTATGGTATCTGACTG
CAATCATGTTCCTGCTGAACAATACCTTTATTCAGGGCTTGCATTGTTTG
GTCGGCGCCGAGTATCTCAACACTATCAGTGGCCATGGAGCCTGCACCAT
TATCTTCTCGCTTGTCACGGCGATCATCTCGCTGATCTGCTCCCTTCCAC
GCACCTTCAGCGCTCTATCCAAGGTGGCGACCCTGTCGGCATTTACCACA
TTCATTTCCGTCATGCTAGCCCTCATTTTCTCTGCCATTGAGGACCATCC
CGCGGGCTATACCCCGGAGATGGGAGATCCCATTGTGAAAGCGATCCCTG
TGCCTGGAACGACCTTTGTATCAGGAATGAGCGCCTTCCTCAATATCAGT
TACACCTTCATTGGACAGATCACCCTGCCAAGCTTTATCGCCGAGATGAA
AGAACCCAAGGATTTCTGGAAGTCTGTCACCGCCGTCACTATCGCCGAGA
TCATCGTGTTCAGCTTGGTCGGTTCTATCGTGTACGCCTACACCGGTAAC
CAGTACATCACGTCGCCGGCATTCGGCTCTCTGGGTAACGAGGTATACAA
AAAGGTGTCCTTCTCGTTCATGATCCCGACGTTGGTTTTCCTCGGCGTGC
TGTATGCCTCCGTGTCGGCGCGTTTCATCTTCTTCCGCTTGTTCGATGGC
ACCCGCCACAAGGGTAACCACACCGTACTCGGATGGGCCGCCTGGACCGG
TATCCTCACCATCCTTTGGATCCTCGCCTTCATCATCGCCGAGGTGATTC
CCTTCTTTTCCGACCTGGAGTCGATCATGAGCTCCCTCTTTGATTCATTT
TTCGGCTTCATCTTCTGGGGCACGGCCTACCTGCGCATGCGTCGGGAGGA
CTATGGACCCAATTTCTACAAGAACCGTGGCATCCGCGGCTGGCTCGGCG
CGATTCTCAATGTTACTCTCATTCTCGCTGGGTTCTTTTTCCTCGGACCA
GGAACTTATGCATCCATTGAGAGTGTCATTATCAGCTACCGAGAAGGCAC
TGTCGGCACTCCCTTCTCCTGCGCCAACACGGGACTGTAGATGGCGGAGT
CCAACACTTTCAAGCCCGTCGTTTCCCGCCGGTCGTCTGTCTCCGACAAT
GCCAGTGCAGCAGATAAGTTGAAGCAGATGGATTTGGAAAATCAGAAACA
GCAGGTGGGCTCTGGCTCAGACACGGAGGGGGAAATCGGCCGTCAGATTG
AAATGGAATCGGAGAATTCCATTAAATACCGTACCTGTAGTTGGCAGAAG
ACGGCCGCCCTCCTGTTCTCCGAGTATATTTGTCTGGCTATCATGTCATT
TCCATGGTCCTATTCCGTTCTCGGCTTGGTCCCGGGGTTGATCCTCACAG
TCGTCATCGCCATGATCGTACTTTATACATCGCTGGTTATTTGGAAGTTT
TGTCTGCGACACCCACATGTCCGTGACGTGTGCGACATCGGCCAAATGAT
ATTCTGGGACTCCAAGATTGTATGGTATCTGACTGCAATCATGTTCCTGC
TGAACAATACCTTTATTCAGGGCTTGCATTGTTTGGTCGGCGCCGAGTAT
CTCAACACTATCAGTGGCCATGGAGCCTGCACCATTATCTTCTCGCTTGT
CACGGCGATCATCTCGCTGATCTGCTCCCTTCCACGCACCTTCAGCGCTC
TATCCAAGGTGGCGACCCTGTCGGCATTTACCACATTCATTTCCGTCATG
CTAGCCCTCATTTTCTCTGCCATTGAGGACCATCCCGCGGGCTATACCCC
GGAGATGGGAGATCCCATTGTGAAAGCGATCCCTGTGCCTGGAACGACCT
TTGTATCAGGAATGAGCGCCTTCCTCAATATCAGTTACACCTTCATTGGA
CAGATCACCCTGCCAAGCTTTATCGCCGAGATGAAAGAACCCAAGGATTT
CTGGAAGTCTGTCACCGCCGTCACTATCGCCGAGATCATCGTGTTCAGCT
TGGTCGGTTCTATCGTGTACGCCTACACCGGTAACCAGTACATCACGTCG
CCGGCATTCGGCTCTCTGGGTAACGAGGTATACAAAAAGGTGTCCTTCTC
GTTCATGATCCCGACGTTGGTTTTCCTCGGCGTGCTGTATGCCTCCGTGT
CGGCGCGTTTCATCTTCTTCCGCTTGTTCGATGGCACCCGCCACAAGGGT
AACCACACCGTACTCGGATGGGCCGCCTGGACCGGTATCCTCACCATCCT
TTGGATCCTCGCCTTCATCATCGCCGAGGTGATTCCCTTCTTTTCCGACC
TGGAGTCGATCATGAGCTCCCTCTTTGATTCATTTTTCGGCTTCATCTTC
TGGGGCACGGCCTACCTGCGCATGCGTCGGGAGGACTATGGACCCAATTT
CTACAAGAACCGTGGCATCCGCGGCTGGCTCGGCGCGATTCTCAATGTTA
CTCTCATTCTCGCTGGGTTCTTTTTCCTCGGACCAGGAACTTATGCATCC
ATTGAGAGTGTCATTATCAGCTACCGAGAAGGCACTGTCGGCACTCCCTT
CTCCTGCGCCAACACGGGACTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012030-T1.utr3p1 | KJC3_012030-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013057 |
| DBxref | InterPro:IPR002229 |
| DBxref | PFAM:PF01490 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2364218..2366942 + |
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