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KJC3_012031-T1, KJC3_012031-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012031-T1
Unique NameKJC3_012031-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2367059..2369085-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012031-T1 ID=KJC3_012031-T1|Name=KJC3_012031-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2027bp|location=Sequence derived from alignment at ch8:2367059..2369085- (Aspergillus niger KJC3)
CAATTATGATCTCCCCCTCAAAGTGTTGGCGAGAGATCCAACTGACAGGC
TCTCATCCTTCGCTTCTTACTATGCAAATCCACTGAAAGGTCAAGCTCAC
TATTCCACCAGTGGAGAAGGTACTACTGCAAGTATGCACTGTAGATATGA
ACAGCCCTCTGAAGCGTGTCCCTACACATAGCCAGCCAACATGAGAAGAC
AAAGAGCATTCACCCATCGATCCAAGAATGGATGCCGCACCTGTCGGTCA
GTCTTTAATCCTTCCATTTCCTACTTCTCCGCTTCCGCTCATCAACATCA
AGACTAGGCTCCTGATCCTAGGGTAAGCAGCTAATCCCCCATGTCCGTGC
ACGCAGGTCCCGCCATATCAAATGTGATGAAACCCCAAATGCATGCCGCA
ACTGCACCTCCACTGGGCGCAAATGTGACGGGTACACCCAATATCGATTA
CCCTTTCGTAAGGCGACACTACCAGTCTCCAAACCATCCAGGAGCCTCAT
CGTCTGTCTGCCCGGACTAGATTCCGATGAGCGTCGATGTCTGCAGTTCT
TCGAGCACAACACCATCCCCATGCTAGTGGGGTATGCCGACTCGGAAGTA
TGGCAGCGTCTCGTGCTACAAATGTGTCACAGAGAACCCGCCGTCTGCCA
CGCAGTAGTCGCGCTCAGCGCCTTTCACGAAAACTACGAGCGGAGCAGCA
TGAACATGGAACCAAAACCCGATCACCGCCACCACCACTACGCCCTGGAA
CAATACAACCGTTCCATGGCGATGCTGCGCCGGCGCATCCAGTCCAACGA
CCCCCAAGTCCGCAGCATCACACTCATGTGCTGCGTCGTGTTCGTAATCC
TTGAACTCCTCGAGGGGGACTACACCAATGCCTTCGCCCATCTACACCAA
GGCCTCAACATCCTGAAAACCCAATCAACTCACCACGCACTAACCACCGA
GCGTATCCTCGCCAAAGCATTCCTTCAACTCAACACCCCCCGAGCCTACT
GGAACGGCCCCGACGTCGTCGTAACCGGCCACCCTCCCAAGGGGAGCGTA
TCCGAAGTAGCCTACTCAAAAACACCAATCCACAGCATCGCCGAAGCAAA
AGAGCGTCTACGAGTCCTAATGAACAACATCTTCCACCTCCAATCCCTCT
GCAACCTCTTCTTCCGCGGCGAACCAGAAGACCCAACCTCCACCACCCCT
CTAACCCTCTCCGCCAAACAAACCACCCTCCACCACGACCTAACAGACTT
CGCCCTGGACCTCAAATCATTCATCTCCTCCCATAAATCCAACACTGCCT
GGACGTTACGAGAAACCCGCAGCGTGGACGTCATCCTCACACACGTAGCA
ACCCTAACCAGCATGCTGGGCTGTTCCCTCGACACAACGGAACTAGGCTA
CGACGACTTCCTACCCGAATTCAAGCGCATCAACGAACTCTGCGAGCGAA
TCACCACCAGCTTCGTGACCGAGTACGGGAGTTACGAGAACCTCCCCACC
ATGGTCACTGACGTCGGGGTCTTGCCGTCGCTGTTCTGGTGCTGTGTGAG
GTGTCGGGATGCAGAGACGAGAGAGCGAGCGCTTCAGTTGCTGAAGATGT
GGCCGCATCGAGAGGGGTTTTATGACTCGTATTTGATTCTGGGGATTTGT
CGGGGGCTGATGGATATTGAGGAGGAGGGGAGGGATGGCGAGGGGTTTAT
TCCGAGGGAGGCTCGTGTGCATACGCACACGGTTGAGGTTGCGGAGGATC
GGAGGAGTATGGTTATTAGGTATGTGTTGGCTGGTGCTGGTGGTGGCGAG
CAGGAGAGGGTGGTGGTGCTGGAGTAAGTACCTTTGTTGTGCGATTTGTT
CCAGGGAAGGGATATTTCATCGATGGTAATGTGTATATATGGAGAGATCG
TATATACAACCATGCAGATATAATAGTATTACTCTATTAGTGAACGGAAA
AGAGAATGAAGGAGGACAGGCAGCTCTCCTGGGAAAGGTTTCGGGAATGA
TGTCTATTTGTACCTCCTATTAACATA
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Coding sequence (CDS) from alignment at ch8:2367059..2369085-

>KJC3_012031-T1 ID=KJC3_012031-T1|Name=KJC3_012031-T1|organism=Aspergillus niger KJC3|type=CDS|length=1257bp|location=Sequence derived from alignment at ch8:2367059..2369085- (Aspergillus niger KJC3)
ATGCTAGTGGGGTATGCCGACTCGGAAGTATGGCAGCGTCTCGTGCTACA
AATGTGTCACAGAGAACCCGCCGTCTGCCACGCAGTAGTCGCGCTCAGCG
CCTTTCACGAAAACTACGAGCGGAGCAGCATGAACATGGAACCAAAACCC
GATCACCGCCACCACCACTACGCCCTGGAACAATACAACCGTTCCATGGC
GATGCTGCGCCGGCGCATCCAGTCCAACGACCCCCAAGTCCGCAGCATCA
CACTCATGTGCTGCGTCGTGTTCGTAATCCTTGAACTCCTCGAGGGGGAC
TACACCAATGCCTTCGCCCATCTACACCAAGGCCTCAACATCCTGAAAAC
CCAATCAACTCACCACGCACTAACCACCGAGCGTATCCTCGCCAAAGCAT
TCCTTCAACTCAACACCCCCCGAGCCTACTGGAACGGCCCCGACGTCGTC
GTAACCGGCCACCCTCCCAAGGGGAGCGTATCCGAAGTAGCCTACTCAAA
AACACCAATCCACAGCATCGCCGAAGCAAAAGAGCGTCTACGAGTCCTAA
TGAACAACATCTTCCACCTCCAATCCCTCTGCAACCTCTTCTTCCGCGGC
GAACCAGAAGACCCAACCTCCACCACCCCTCTAACCCTCTCCGCCAAACA
AACCACCCTCCACCACGACCTAACAGACTTCGCCCTGGACCTCAAATCAT
TCATCTCCTCCCATAAATCCAACACTGCCTGGACGTTACGAGAAACCCGC
AGCGTGGACGTCATCCTCACACACGTAGCAACCCTAACCAGCATGCTGGG
CTGTTCCCTCGACACAACGGAACTAGGCTACGACGACTTCCTACCCGAAT
TCAAGCGCATCAACGAACTCTGCGAGCGAATCACCACCAGCTTCGTGACC
GAGTACGGGAGTTACGAGAACCTCCCCACCATGGTCACTGACGTCGGGGT
CTTGCCGTCGCTGTTCTGGTGCTGTGTGAGGTGTCGGGATGCAGAGACGA
GAGAGCGAGCGCTTCAGTTGCTGAAGATGTGGCCGCATCGAGAGGGGTTT
TATGACTCGTATTTGATTCTGGGGATTTGTCGGGGGCTGATGGATATTGA
GGAGGAGGGGAGGGATGGCGAGGGGTTTATTCCGAGGGAGGCTCGTGTGC
ATACGCACACGGTTGAGGTTGCGGAGGATCGGAGGAGTATGGTTATTAGG
TATGTGTTGGCTGGTGCTGGTGGTGGCGAGCAGGAGAGGGTGGTGGTGCT
GGAGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012031KJC3_012031Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012031-T1KJC3_012031-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012031-T1.cdsKJC3_012031-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012031-T1.utr3p1KJC3_012031-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012031-T1.exon3KJC3_012031-T1.exon3Aspergillus niger KJC3exon
KJC3_012031-T1.exon2KJC3_012031-T1.exon2Aspergillus niger KJC3exon
KJC3_012031-T1.exon1KJC3_012031-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012031-T1.utr5p3KJC3_012031-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_012031-T1.utr5p2KJC3_012031-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012031-T1.utr5p1KJC3_012031-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021858
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2367059..2369085 -
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