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KJC3_012056-T1, KJC3_012056-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012056-T1
Unique NameKJC3_012056-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2440913..2442251-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012056-T1 ID=KJC3_012056-T1|Name=KJC3_012056-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1339bp|location=Sequence derived from alignment at ch8:2440913..2442251- (Aspergillus niger KJC3)
TCCAGCTTCCCTTTTTCGTGTCAAGCCCCAGACGTTGTCGCTTGAAGTAT
TCGAAAGATGTCGACCCAAGGCGAACCATTCTACCTCCGCTACTAGTAAG
GATGATTTGTGTGTGGCCCAGATTTCCTCAGCTGCTGACAGTTCCGCAGC
TCAGGTCACTCTGGGCGGTTCGGACATGAGTTTCTAGGTAGGTTCCCCGC
GATGGTCTACAGCTCGAGCTTCCCTATTAACAGAGCTTAAGAGTTCGACT
TCCGTACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAACAAC
TCCAACTACCGCAATGATTCCCTGATCCGGAAAGAAAGTGAGTGCTAGGA
AAGGGCCGTCCGGTTCTACATCGATTCGCTAATGGGCGATCACTACAGTG
TGCGTGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAAAG
TGAGATCATGAAGTGAGTCAATCAGTGGGGTTCAATGGCGGTTGGTGGGG
GTAAAAAGATGCTGATGCGACGCAGGGAGGATGATTCCAAATGGCCTCAG
AAGAACAAGGATGGACGTCAGGAACTTGAGATTCGGCTCGGGAACGAGCA
TATCTCCTTTGAGGTATGTCCATCGCCTCATTGACATAGATACTAACAGA
CGGGAACCTGACATCTGTTGTAGACTGCGAAAATCGGCTCATTGGTGGAT
GTGACTGAATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACTATCTCGT
CCAGGACCTGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCATTTCAAGG
TAAACACAGCTCCTTTGTCTCTTGCTACTCTATGAGTATCGAGTCTAATT
CGGTAATAGATTAAACCCATCTAAATGGTGGTGGTTGTGGGAACATGAAA
TGAAACGGTTCAACTTTCTGGGATGAATAATAGGCGTTTTCTATTTGACT
GCAGCCGTGGCGGATATACTACTAGTGCTACTTTTTCTTTTTTTTTACTT
TTCCTTTTCCACATTCCCCCAAAAATTTGTCTGGCAGTTTGGGTTGCTTG
AAACGAGGCCCGATGGCAAAGCGACTCACCGAAAGGCGATGACGCAATGA
GAGCTTGCCACTTAGGGCCAACGTAGCGGAAGAATTGGAATACCCAACGA
CGTGTATGTGTGTGTGTATGTAGGTGTCTGAAGTGTTTGATGTGTAAAAA
AAAGAGCCGAAAACGGAAACAAAAGCAGCGAGAGCAAGCCATTGCATAAT
GGGGATTATTATTGTAGCGGGCCACGTCCGTCGGGACGAGCGTCAGAAAA
GCTGCAAGGGAGGCCGTGCCAGACGTGCAAAGGCTGCAA
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Coding sequence (CDS) from alignment at ch8:2440913..2442251-

>KJC3_012056-T1 ID=KJC3_012056-T1|Name=KJC3_012056-T1|organism=Aspergillus niger KJC3|type=CDS|length=3255bp|location=Sequence derived from alignment at ch8:2440913..2442251- (Aspergillus niger KJC3)
ATTAAACCCATCTAAACTGCGAAAATCGGCTCATTGGTGGATGTGACTGA
ATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACTATCTCGTCCAGGACC
TGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCATTTCAAGGGAGGATGA
TTCCAAATGGCCTCAGAAGAACAAGGATGGACGTCAGGAACTTGAGATTC
GGCTCGGGAACGAGCATATCTCCTTTGAGTGTGCGTGAGCGCGTCGATGA
TTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAGATCATGAAAGTTCGA
CTTCCGTACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAACA
ACTCCAACTACCGCAATGATTCCCTGATCCGGAAAGAAACTCAGGTCACT
CTGGGCGGTTCGGACATGAGTTTCTAGATGTCGACCCAAGGCGAACCATT
CTACCTCCGCTACTAATTAAACCCATCTAAACTGCGAAAATCGGCTCATT
GGTGGATGTGACTGAATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACT
ATCTCGTCCAGGACCTGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCAT
TTCAAGGGAGGATGATTCCAAATGGCCTCAGAAGAACAAGGATGGACGTC
AGGAACTTGAGATTCGGCTCGGGAACGAGCATATCTCCTTTGAGTGTGCG
TGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAG
ATCATGAAAGTTCGACTTCCGTACCCTTGGCGATGGCCGTAGCGCTGCCG
TGCGATATGCGAACAACTCCAACTACCGCAATGATTCCCTGATCCGGAAA
GAAACTCAGGTCACTCTGGGCGGTTCGGACATGAGTTTCTAGATGTCGAC
CCAAGGCGAACCATTCTACCTCCGCTACTAATTAAACCCATCTAAACTGC
GAAAATCGGCTCATTGGTGGATGTGACTGAATCTGCGGACCCGGAAGGCC
TACGAGTCTTCTACTATCTCGTCCAGGACCTGAAGGCCCTCATCTTCTCG
CTTATTTCGCTCCATTTCAAGGGAGGATGATTCCAAATGGCCTCAGAAGA
ACAAGGATGGACGTCAGGAACTTGAGATTCGGCTCGGGAACGAGCATATC
TCCTTTGAGTGTGCGTGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATC
ATCAAGGAAAGTGAGATCATGAAAGTTCGACTTCCGTACCCTTGGCGATG
GCCGTAGCGCTGCCGTGCGATATGCGAACAACTCCAACTACCGCAATGAT
TCCCTGATCCGGAAAGAAACTCAGGTCACTCTGGGCGGTTCGGACATGAG
TTTCTAGATGTCGACCCAAGGCGAACCATTCTACCTCCGCTACTAATTAA
ACCCATCTAAACTGCGAAAATCGGCTCATTGGTGGATGTGACTGAATCTG
CGGACCCGGAAGGCCTACGAGTCTTCTACTATCTCGTCCAGGACCTGAAG
GCCCTCATCTTCTCGCTTATTTCGCTCCATTTCAAGGGAGGATGATTCCA
AATGGCCTCAGAAGAACAAGGATGGACGTCAGGAACTTGAGATTCGGCTC
GGGAACGAGCATATCTCCTTTGAGTGTGCGTGAGCGCGTCGATGATTCAG
GAAGTGAAGCGCATCATCAAGGAAAGTGAGATCATGAAAGTTCGACTTCC
GTACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAACAACTCC
AACTACCGCAATGATTCCCTGATCCGGAAAGAAACTCAGGTCACTCTGGG
CGGTTCGGACATGAGTTTCTAGATGTCGACCCAAGGCGAACCATTCTACC
TCCGCTACTAATTAAACCCATCTAAACTGCGAAAATCGGCTCATTGGTGG
ATGTGACTGAATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACTATCTC
GTCCAGGACCTGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCATTTCAA
GGGAGGATGATTCCAAATGGCCTCAGAAGAACAAGGATGGACGTCAGGAA
CTTGAGATTCGGCTCGGGAACGAGCATATCTCCTTTGAGTGTGCGTGAGC
GCGTCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAGATCAT
GAAAGTTCGACTTCCGTACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGA
TATGCGAACAACTCCAACTACCGCAATGATTCCCTGATCCGGAAAGAAAC
TCAGGTCACTCTGGGCGGTTCGGACATGAGTTTCTAGATGTCGACCCAAG
GCGAACCATTCTACCTCCGCTACTAATTAAACCCATCTAAACTGCGAAAA
TCGGCTCATTGGTGGATGTGACTGAATCTGCGGACCCGGAAGGCCTACGA
GTCTTCTACTATCTCGTCCAGGACCTGAAGGCCCTCATCTTCTCGCTTAT
TTCGCTCCATTTCAAGGGAGGATGATTCCAAATGGCCTCAGAAGAACAAG
GATGGACGTCAGGAACTTGAGATTCGGCTCGGGAACGAGCATATCTCCTT
TGAGTGTGCGTGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATCATCAA
GGAAAGTGAGATCATGAAAGTTCGACTTCCGTACCCTTGGCGATGGCCGT
AGCGCTGCCGTGCGATATGCGAACAACTCCAACTACCGCAATGATTCCCT
GATCCGGAAAGAAACTCAGGTCACTCTGGGCGGTTCGGACATGAGTTTCT
AGATGTCGACCCAAGGCGAACCATTCTACCTCCGCTACTAATTAAACCCA
TCTAAACTGCGAAAATCGGCTCATTGGTGGATGTGACTGAATCTGCGGAC
CCGGAAGGCCTACGAGTCTTCTACTATCTCGTCCAGGACCTGAAGGCCCT
CATCTTCTCGCTTATTTCGCTCCATTTCAAGGGAGGATGATTCCAAATGG
CCTCAGAAGAACAAGGATGGACGTCAGGAACTTGAGATTCGGCTCGGGAA
CGAGCATATCTCCTTTGAGTGTGCGTGAGCGCGTCGATGATTCAGGAAGT
GAAGCGCATCATCAAGGAAAGTGAGATCATGAAAGTTCGACTTCCGTACC
CTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAACAACTCCAACTA
CCGCAATGATTCCCTGATCCGGAAAGAAACTCAGGTCACTCTGGGCGGTT
CGGACATGAGTTTCTAGATGTCGACCCAAGGCGAACCATTCTACCTCCGC
TACTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0035145exon-exon junction complex
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0008380RNA splicing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012056KJC3_012056Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012056-T1KJC3_012056-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012056-T1.cdsKJC3_012056-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012056-T1.utr3p1KJC3_012056-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012056-T1.exon7KJC3_012056-T1.exon7Aspergillus niger KJC3exon
KJC3_012056-T1.exon6KJC3_012056-T1.exon6Aspergillus niger KJC3exon
KJC3_012056-T1.exon5KJC3_012056-T1.exon5Aspergillus niger KJC3exon
KJC3_012056-T1.exon4KJC3_012056-T1.exon4Aspergillus niger KJC3exon
KJC3_012056-T1.exon3KJC3_012056-T1.exon3Aspergillus niger KJC3exon
KJC3_012056-T1.exon2KJC3_012056-T1.exon2Aspergillus niger KJC3exon
KJC3_012056-T1.exon1KJC3_012056-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012056-T1.utr5p1KJC3_012056-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR017441
DBxrefInterPro:IPR004023
DBxrefInterPro:IPR036605
DBxrefPFAM:PF02792
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2440913..2442251 -
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