You are here

Home

KJC3_012064-T1, KJC3_012064-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012064-T1
Unique NameKJC3_012064-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2460928..2463196-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012064-T1 ID=KJC3_012064-T1|Name=KJC3_012064-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2269bp|location=Sequence derived from alignment at ch8:2460928..2463196- (Aspergillus niger KJC3)
ATGGCCAGTAAAAGGAGCCGCGCCGCCTTTGAGGCAGACCTGCAGGCGCG
CCAGTCTCCTTACGCATTATACGGAACTCCGTTACCCCCACTAGACGATA
GCGTGCGAGACGACGGATCATATGCGCCCATCTGGAAGCAGGAGGTGACC
GATGACCGGGGAAGGAAACGCCTACATGGTGCCTTCACCGGTGGGTTCAG
TGCCGGGTGAGCTCACGATTCATGAATAGCGTTGGACAGCACACTAAAGG
CGGCCCATCTTCAGGTACTTCAACACCGTCGGGTCGAAGGAAGGATGGAC
TCCAGCAACCTTTGTGTCTTCGCGCCAGAACCGCGCCAAGGATGTTCGAC
AGCAACGACCAGAAGATTTCATGGATGAGGAGGATGTTCGGGAAGCAGAA
GAGGCCAAGAGACTGCAAACTGCCGATGAGTACTCCGGCTTTGGTTCTAC
AGATGCCGAATTGGCGCGCCGCGGAGGGTTGATGGACCTTCTGAAAACGA
GCGGAGAAACTATGGGGGTGAAACTTCTGAAGAGGATGGGGTGGCGAGAA
GGCCAGGGGATTGGGCCCAAGGTGCGACGTAGAGCTGACCTCGGGGACGG
TATGTTGCAACGTGACGGAGGAGCTGAACAAACATACCTCTTCGCGCCCG
AAAACCCGCCAATGGTTGCCTTCATCCATAAGACCGATCATAAGGGCCTT
GGATATGAAGGAGAGGCCCGTCTAGACGCTCAGCAAACCAAAGCAAACGA
GTCCGACGACGAGGATAATGATGCGTTCTTCGGAAAGCGGCTAATGGCTC
CGGGGAAGCCGAAGCAGCCCAAAGCGAAAGGACCTCGACGCGGGGCGTTT
GGTGTCGGCGTGTTGAATGATACTGGCTCGGATGACGAGGATCCCTATTC
CTTAGGCCCACAGATATCTTACAACCGAGTCATTGGAGGGGACAAAAAGA
AGAAGAAGAAAGCAAAGCCTGCTGAGGATGCGAGAACCCTCCCCAGTTCG
TCAAACCCGCTTCTCAGCAACAAACCCGTATACATACCGAAGAGGGTCAT
TGCCGCCAAGGGTGCCGCCGGTTTTCGAAAGTGTTCTGATGGTCGTTTAC
CTTTGGAAGGATTCTTGCTTGCGGAGGGAATTTCAAGCCTCTCAATATCC
TCGCAAGAGAAGAAGTATGCGCCACCAGAAATCCCCAAGGATTGGAAATC
CCGCAAAGCACCGACACAGGAAAGGGATGTCTCAAACTACGTTTCTACGG
CTGAGGCAGCTAAAGCTTCGTCAATGGATCCTACCGCAAGAGCCGCTCTC
TTGGGAGAAGCACAACTTCCCGGAAAGTCCATATTCGATTGGATGACTCC
CGAGGCTCGGGAAAGAATCGTGAAGCTTACAGGGAAGACCGATCTGCCGC
CGGCGCTTGGTGAAAAAGCCCCTAAAGGTTACGAGGTCTCAGAAGCGGAG
AAGCGCAAGGATTTATGGGATCTCGTACCTAAATTGGACAAGCAGGTAGC
CGTCCAGGCACTCACACGAGCAGCCAGTGGTTGGATGCCGTATTCGGAAG
ACCTAAGCAAACGGGACCGCTATCGAACATTCCTACAAGTACGAGCTGGA
CTCCGAGACAGTCTCCCGGACCGGGTTGCCGGATCAACTACAGATGAATG
GGCTGCGGAACTACACGAATTTGCGCGAGCGGCGGAGGTCTTCAAGCCGA
TGTCTGGGCTCATGGCATCGCGATTCACCTCTGCCAGTTCCGGACCCAAA
GAGTCGTCCGACAAGTCTGACGGATCTCCTTCGGCGGAGCCGTTGCTTAG
CAAGCCCGCAGCAAAACCAGAGGACCCTGCAGTGGAGGCAGCGAAGATTG
GCATGTTTGGCCCAATGACTCGTAGTAGCATCTCTTTCTACCCGACGCGT
CTCTTGTGCAAACGATTCAATGTTCGGCCCCCCGAGCATGTCCAAATGGA
TCCTGGTGCGCCATCGGGACGCGCTGAAGCCTCAGCCCCCGGGAGCCGGT
TCCAATCGGCAGGTTACCAGACCGCTTCCGGGCCGAAAGAGTTAGTTTCG
CGGGATGTTATGAACCAGCTCATGCTTGAGGCTGGCGGTGGATCTCTGGC
AGCTTCAGACGCGGCCTCGCCGACGTCATCAGGGCCAGCGGGGAGTCGGG
CACCAGTGGTGGTCGAGCCAGAGCGCAACGAAGCTCTAGAAGCCGAGCGG
CCGGGCGAGGCGGTGTTCAAGGCGATCTTCGGCAGCGATGATGAAGACGA
GGATGAGGAAATGAGCTGA
back to top

Coding sequence (CDS) from alignment at ch8:2460928..2463196-

>KJC3_012064-T1 ID=KJC3_012064-T1|Name=KJC3_012064-T1|organism=Aspergillus niger KJC3|type=CDS|length=4422bp|location=Sequence derived from alignment at ch8:2460928..2463196- (Aspergillus niger KJC3)
GTACTTCAACACCGTCGGGTCGAAGGAAGGATGGACTCCAGCAACCTTTG
TGTCTTCGCGCCAGAACCGCGCCAAGGATGTTCGACAGCAACGACCAGAA
GATTTCATGGATGAGGAGGATGTTCGGGAAGCAGAAGAGGCCAAGAGACT
GCAAACTGCCGATGAGTACTCCGGCTTTGGTTCTACAGATGCCGAATTGG
CGCGCCGCGGAGGGTTGATGGACCTTCTGAAAACGAGCGGAGAAACTATG
GGGGTGAAACTTCTGAAGAGGATGGGGTGGCGAGAAGGCCAGGGGATTGG
GCCCAAGGTGCGACGTAGAGCTGACCTCGGGGACGGTATGTTGCAACGTG
ACGGAGGAGCTGAACAAACATACCTCTTCGCGCCCGAAAACCCGCCAATG
GTTGCCTTCATCCATAAGACCGATCATAAGGGCCTTGGATATGAAGGAGA
GGCCCGTCTAGACGCTCAGCAAACCAAAGCAAACGAGTCCGACGACGAGG
ATAATGATGCGTTCTTCGGAAAGCGGCTAATGGCTCCGGGGAAGCCGAAG
CAGCCCAAAGCGAAAGGACCTCGACGCGGGGCGTTTGGTGTCGGCGTGTT
GAATGATACTGGCTCGGATGACGAGGATCCCTATTCCTTAGGCCCACAGA
TATCTTACAACCGAGTCATTGGAGGGGACAAAAAGAAGAAGAAGAAAGCA
AAGCCTGCTGAGGATGCGAGAACCCTCCCCAGTTCGTCAAACCCGCTTCT
CAGCAACAAACCCGTATACATACCGAAGAGGGTCATTGCCGCCAAGGGTG
CCGCCGGTTTTCGAAAGTGTTCTGATGGTCGTTTACCTTTGGAAGGATTC
TTGCTTGCGGAGGGAATTTCAAGCCTCTCAATATCCTCGCAAGAGAAGAA
GTATGCGCCACCAGAAATCCCCAAGGATTGGAAATCCCGCAAAGCACCGA
CACAGGAAAGGGATGTCTCAAACTACGTTTCTACGGCTGAGGCAGCTAAA
GCTTCGTCAATGGATCCTACCGCAAGAGCCGCTCTCTTGGGAGAAGCACA
ACTTCCCGGAAAGTCCATATTCGATTGGATGACTCCCGAGGCTCGGGAAA
GAATCGTGAAGCTTACAGGGAAGACCGATCTGCCGCCGGCGCTTGGTGAA
AAAGCCCCTAAAGGTTACGAGGTCTCAGAAGCGGAGAAGCGCAAGGATTT
ATGGGATCTCGTACCTAAATTGGACAAGCAGGTAGCCGTCCAGGCACTCA
CACGAGCAGCCAGTGGTTGGATGCCGTATTCGGAAGACCTAAGCAAACGG
GACCGCTATCGAACATTCCTACAAGTACGAGCTGGACTCCGAGACAGTCT
CCCGGACCGGGTTGCCGGATCAACTACAGATGAATGGGCTGCGGAACTAC
ACGAATTTGCGCGAGCGGCGGAGGTCTTCAAGCCGATGTCTGGGCTCATG
GCATCGCGATTCACCTCTGCCAGTTCCGGACCCAAAGAGTCGTCCGACAA
GTCTGACGGATCTCCTTCGGCGGAGCCGTTGCTTAGCAAGCCCGCAGCAA
AACCAGAGGACCCTGCAGTGGAGGCAGCGAAGATTGGCATGTTTGGCCCA
ATGACTCGTAGTAGCATCTCTTTCTACCCGACGCGTCTCTTGTGCAAACG
ATTCAATGTTCGGCCCCCCGAGCATGTCCAAATGGATCCTGGTGCGCCAT
CGGGACGCGCTGAAGCCTCAGCCCCCGGGAGCCGGTTCCAATCGGCAGGT
TACCAGACCGCTTCCGGGCCGAAAGAGTTAGTTTCGCGGGATGTTATGAA
CCAGCTCATGCTTGAGGCTGGCGGTGGATCTCTGGCAGCTTCAGACGCGG
CCTCGCCGACGTCATCAGGGCCAGCGGGGAGTCGGGCACCAGTGGTGGTC
GAGCCAGAGCGCAACGAAGCTCTAGAAGCCGAGCGGCCGGGCGAGGCGGT
GTTCAAGGCGATCTTCGGCAGCGATGATGAAGACGAGGATGAGGAAATGA
GCTGAATGGCCAGTAAAAGGAGCCGCGCCGCCTTTGAGGCAGACCTGCAG
GCGCGCCAGTCTCCTTACGCATTATACGGAACTCCGTTACCCCCACTAGA
CGATAGCGTGCGAGACGACGGATCATATGCGCCCATCTGGAAGCAGGAGG
TGACCGATGACCGGGGAAGGAAACGCCTACATGGTGCCTTCACCGGTGGG
TTCAGTGCCGGGTACTTCAACACCGTCGGGTCGAAGGAAGGATGGACTCC
AGCAACCTTTGTGTCTTCGCGCCAGAACCGCGCCAAGGATGTTCGACAGC
AACGACCAGAAGATTTCATGGATGAGGAGGATGTTCGGGAAGCAGAAGAG
GCCAAGAGACTGCAAACTGCCGATGAGTACTCCGGCTTTGGTTCTACAGA
TGCCGAATTGGCGCGCCGCGGAGGGTTGATGGACCTTCTGAAAACGAGCG
GAGAAACTATGGGGGTGAAACTTCTGAAGAGGATGGGGTGGCGAGAAGGC
CAGGGGATTGGGCCCAAGGTGCGACGTAGAGCTGACCTCGGGGACGGTAT
GTTGCAACGTGACGGAGGAGCTGAACAAACATACCTCTTCGCGCCCGAAA
ACCCGCCAATGGTTGCCTTCATCCATAAGACCGATCATAAGGGCCTTGGA
TATGAAGGAGAGGCCCGTCTAGACGCTCAGCAAACCAAAGCAAACGAGTC
CGACGACGAGGATAATGATGCGTTCTTCGGAAAGCGGCTAATGGCTCCGG
GGAAGCCGAAGCAGCCCAAAGCGAAAGGACCTCGACGCGGGGCGTTTGGT
GTCGGCGTGTTGAATGATACTGGCTCGGATGACGAGGATCCCTATTCCTT
AGGCCCACAGATATCTTACAACCGAGTCATTGGAGGGGACAAAAAGAAGA
AGAAGAAAGCAAAGCCTGCTGAGGATGCGAGAACCCTCCCCAGTTCGTCA
AACCCGCTTCTCAGCAACAAACCCGTATACATACCGAAGAGGGTCATTGC
CGCCAAGGGTGCCGCCGGTTTTCGAAAGTGTTCTGATGGTCGTTTACCTT
TGGAAGGATTCTTGCTTGCGGAGGGAATTTCAAGCCTCTCAATATCCTCG
CAAGAGAAGAAGTATGCGCCACCAGAAATCCCCAAGGATTGGAAATCCCG
CAAAGCACCGACACAGGAAAGGGATGTCTCAAACTACGTTTCTACGGCTG
AGGCAGCTAAAGCTTCGTCAATGGATCCTACCGCAAGAGCCGCTCTCTTG
GGAGAAGCACAACTTCCCGGAAAGTCCATATTCGATTGGATGACTCCCGA
GGCTCGGGAAAGAATCGTGAAGCTTACAGGGAAGACCGATCTGCCGCCGG
CGCTTGGTGAAAAAGCCCCTAAAGGTTACGAGGTCTCAGAAGCGGAGAAG
CGCAAGGATTTATGGGATCTCGTACCTAAATTGGACAAGCAGGTAGCCGT
CCAGGCACTCACACGAGCAGCCAGTGGTTGGATGCCGTATTCGGAAGACC
TAAGCAAACGGGACCGCTATCGAACATTCCTACAAGTACGAGCTGGACTC
CGAGACAGTCTCCCGGACCGGGTTGCCGGATCAACTACAGATGAATGGGC
TGCGGAACTACACGAATTTGCGCGAGCGGCGGAGGTCTTCAAGCCGATGT
CTGGGCTCATGGCATCGCGATTCACCTCTGCCAGTTCCGGACCCAAAGAG
TCGTCCGACAAGTCTGACGGATCTCCTTCGGCGGAGCCGTTGCTTAGCAA
GCCCGCAGCAAAACCAGAGGACCCTGCAGTGGAGGCAGCGAAGATTGGCA
TGTTTGGCCCAATGACTCGTAGTAGCATCTCTTTCTACCCGACGCGTCTC
TTGTGCAAACGATTCAATGTTCGGCCCCCCGAGCATGTCCAAATGGATCC
TGGTGCGCCATCGGGACGCGCTGAAGCCTCAGCCCCCGGGAGCCGGTTCC
AATCGGCAGGTTACCAGACCGCTTCCGGGCCGAAAGAGTTAGTTTCGCGG
GATGTTATGAACCAGCTCATGCTTGAGGCTGGCGGTGGATCTCTGGCAGC
TTCAGACGCGGCCTCGCCGACGTCATCAGGGCCAGCGGGGAGTCGGGCAC
CAGTGGTGGTCGAGCCAGAGCGCAACGAAGCTCTAGAAGCCGAGCGGCCG
GGCGAGGCGGTGTTCAAGGCGATCTTCGGCAGCGATGATGAAGACGAGGA
TGAGGAAATGAGCTGAATGGCCAGTAAAAGGAGCCGCGCCGCCTTTGAGG
CAGACCTGCAGGCGCGCCAGTCTCCTTACGCATTATACGGAACTCCGTTA
CCCCCACTAGACGATAGCGTGCGAGACGACGGATCATATGCGCCCATCTG
GAAGCAGGAGGTGACCGATGACCGGGGAAGGAAACGCCTACATGGTGCCT
TCACCGGTGGGTTCAGTGCCGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012064KJC3_012064Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012064-T1KJC3_012064-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012064-T1.cdsKJC3_012064-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012064-T1.exon2KJC3_012064-T1.exon2Aspergillus niger KJC3exon
KJC3_012064-T1.exon1KJC3_012064-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR035960
DBxrefInterPro:IPR011666
DBxrefInterPro:IPR000467
DBxrefPFAM:PF01585
DBxrefPFAM:PF07713
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2460928..2463196 -
Powered by Drupal