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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2553787..2555808+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012094-T1 ID=KJC3_012094-T1|Name=KJC3_012094-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2022bp|location=Sequence derived from alignment at ch8:2553787..2555808+ (Aspergillus niger KJC3)
ATGCCCCCCGCCACGTACGTCTGCGCGTGTATATGATGAGCTTGAACCAG
CCTGACATCCTGCAGCTCCCATAAAAAAGCTAAAATATCTCATTCGGGTG
ATGAGAGTCGGTCTCTCTCCCCTCCGAGGCTACAAACCCTGCCACGCAAT
TTTCTCATTGTTGCCCCGCGCTCGCAGAGGAAGCGTCGACGGGATGAGTC
CTTTCCACCCCGGCATGATCGAAACCGAGGTGACTCGGTAGAGGTATACT
CCATCATCTCAGATGGCAGCGACCCTCCTAACCCGCCGGGCACCGGGATC
AATGCCCACATCTCACGCCTGACCCGGCTGCAGCAGGCCGTGGATGCAAG
AACAGGACGGGTGAAGACTGAAGCTCCAATCGAAGATGGCATATTCTCGC
TGCAAGATACAGGGCGAGACTGCCCTCCTCACTTGACCATTGCCGAATCT
CCAGCCCAATTGCCCTCAGACCTGATGAACAGTCTGATTGCAACCTATCT
GGCCCGCGACTATGTGAACTGGCCGATCTTCGATCTATCAGACTTCCAGT
CGGCCCGTGAGAAGGTTGGCGACATGCAGGACCTCACGGCTGGGTCGAGT
GGCCTCCACGCCATCCTCAAGATGATTTTGTGTCTCTCTGGACTGAGATA
CCATCAAGTAGATGAAGCCTATCTGCAATCTCTCTTCAATCACGCCCAGA
GAATGACAAACAGCCCAGATTGGCAAGGCACGCCCTGGGTGCGCGTACAA
TGTCTCTTCCTACAATGCCAGTACCTCAACGCAACAGGGAAATCAAAGCA
AGCCTGGGCCCTAATTGGCTACGCCATCCGCACCATGCAAGCCCTAGGAC
TGCAGCCACAGACAAACGCGCATAACGGACGGGAACGACAGCAGCGCGAA
CTCGGCCGCAGGCTCTGGCACAGCGCAATCATCCTAGAGCGAATGCTAGC
ATTACAACTAGGCCTACCACCTCAGGTCTCCAATCCCCTCCAGGTACATC
TACCCACGCACCTGGACACCGACTACATCGACACCGTATCAGGCGGAGCG
CCCAACTCCAGCGGAGACCGACCCTCGATCATCGAGCTTTTAATCGCATG
CGCCAGACTCTACACCCACGTCGAAGAGATAACTGCTTGGGAATCTGAAG
CAAGAATCCGACCAGACACCTGCGCCGCCAAGAAGCTCCTCGCCCTGGAC
CTCTCCCCATTCCTGAAAACAGATGCTCTCCTCTACGACTGGCAGACATC
CCTGCCCTCATTCCTTCGCACCGACGAAACATTCGAACTAGCCGATGACC
CCATTGTTCGCCGCCAACGCCACACCCTGCACGCCCGTTACCTCTACCTT
CGTCTCCGACTTTATCGGCCCCTTTTAGCTCTGGGCCTCGCCCTGTCAGC
CAAATGCACCTGCCGGTCAAACAAACACCCTCACATGTCGGAGACAGACC
CTTCTTCTTCTATCAACTCCCCTATACTGGTTACCATCGTCCGCGACACC
TCCCTCAAATGCGCCACCATCGCCGCAGACCTCGCCGACTTGATCGAAGA
AACCGAGGACGGGCTGCTCGACGGCGGTCCAGATGATACCTGGCGCAGCG
CTGGATCGCCATACTGGGAGAATGTGGAGTATCTCTATGCCTGTGGGATT
GTTATCCTGGCGGCGCGGCTGTGCTCCAGCTCGGGCGTGGCGCAGCTGAA
GAGGGCCTGGACGAGGGTTATTTCCTTGTTGACAAGGTATGAAGGTTTCC
GGGCTGGGGAGTATGCTCGTCTTGCGAGATTGGGGAGGAACACGCTTGAG
AATCTGGCGGGTGCGTTGCAGAGGGATGTGGGGGAGGCGATGGTGATGGG
ATTGGATGGGGAGACGAGGACGAGGTTGGTGGGGAGAACAAGTGGTGGTG
CTGTGGACTCGTCGGGGGGAGGGCGTAGACAAAGTCGGGGTCAGGGTCAG
AGTCAGAGTCAACGGGGGGATTTGGGTTGGGTTGAGAGCTTGTTGATTGA
TTTGGTGGGGGATGATGTATGA back to topCoding sequence (CDS) from alignment at ch8:2553787..2555808+ >KJC3_012094-T1 ID=KJC3_012094-T1|Name=KJC3_012094-T1|organism=Aspergillus niger KJC3|type=CDS|length=3942bp|location=Sequence derived from alignment at ch8:2553787..2555808+ (Aspergillus niger KJC3)
ATGCCCCCCGCCACCTCCCATAAAAAAGCTAAAATATCTCATTCGGGTGA
TGAGAGTCGGTCTCTCTCCCCTCCGAGGCTACAAACCCTGCCACGCAATT
TTCTCATTGTTGCCCCGCGCTCGCAGAGGAAGCGTCGACGGGATGAGTCC
TTTCCACCCCGGCATGATCGAAACCGAGGTGACTCGGTAGAGGTATACTC
CATCATCTCAGATGGCAGCGACCCTCCTAACCCGCCGGGCACCGGGATCA
ATGCCCACATCTCACGCCTGACCCGGCTGCAGCAGGCCGTGGATGCAAGA
ACAGGACGGGTGAAGACTGAAGCTCCAATCGAAGATGGCATATTCTCGCT
GCAAGATACAGGGCGAGACTGCCCTCCTCACTTGACCATTGCCGAATCTC
CAGCCCAATTGCCCTCAGACCTGATGAACAGTCTGATTGCAACCTATCTG
GCCCGCGACTATGTGAACTGGCCGATCTTCGATCTATCAGACTTCCAGTC
GGCCCGTGAGAAGGTTGGCGACATGCAGGACCTCACGGCTGGGTCGAGTG
GCCTCCACGCCATCCTCAAGATGATTTTGTGTCTCTCTGGACTGAGATAC
CATCAAGTAGATGAAGCCTATCTGCAATCTCTCTTCAATCACGCCCAGAG
AATGACAAACAGCCCAGATTGGCAAGGCACGCCCTGGGTGCGCGTACAAT
GTCTCTTCCTACAATGCCAGTACCTCAACGCAACAGGGAAATCAAAGCAA
GCCTGGGCCCTAATTGGCTACGCCATCCGCACCATGCAAGCCCTAGGACT
GCAGCCACAGACAAACGCGCATAACGGACGGGAACGACAGCAGCGCGAAC
TCGGCCGCAGGCTCTGGCACAGCGCAATCATCCTAGAGCGAATGCTAGCA
TTACAACTAGGCCTACCACCTCAGGTCTCCAATCCCCTCCAGGTACATCT
ACCCACGCACCTGGACACCGACTACATCGACACCGTATCAGGCGGAGCGC
CCAACTCCAGCGGAGACCGACCCTCGATCATCGAGCTTTTAATCGCATGC
GCCAGACTCTACACCCACGTCGAAGAGATAACTGCTTGGGAATCTGAAGC
AAGAATCCGACCAGACACCTGCGCCGCCAAGAAGCTCCTCGCCCTGGACC
TCTCCCCATTCCTGAAAACAGATGCTCTCCTCTACGACTGGCAGACATCC
CTGCCCTCATTCCTTCGCACCGACGAAACATTCGAACTAGCCGATGACCC
CATTGTTCGCCGCCAACGCCACACCCTGCACGCCCGTTACCTCTACCTTC
GTCTCCGACTTTATCGGCCCCTTTTAGCTCTGGGCCTCGCCCTGTCAGCC
AAATGCACCTGCCGGTCAAACAAACACCCTCACATGTCGGAGACAGACCC
TTCTTCTTCTATCAACTCCCCTATACTGGTTACCATCGTCCGCGACACCT
CCCTCAAATGCGCCACCATCGCCGCAGACCTCGCCGACTTGATCGAAGAA
ACCGAGGACGGGCTGCTCGACGGCGGTCCAGATGATACCTGGCGCAGCGC
TGGATCGCCATACTGGGAGAATGTGGAGTATCTCTATGCCTGTGGGATTG
TTATCCTGGCGGCGCGGCTGTGCTCCAGCTCGGGCGTGGCGCAGCTGAAG
AGGGCCTGGACGAGGGTTATTTCCTTGTTGACAAGGTATGAAGGTTTCCG
GGCTGGGGAGTATGCTCGTCTTGCGAGATTGGGGAGGAACACGCTTGAGA
ATCTGGCGGGTGCGTTGCAGAGGGATGTGGGGGAGGCGATGGTGATGGGA
TTGGATGGGGAGACGAGGACGAGGTTGGTGGGGAGAACAAGTGGTGGTGC
TGTGGACTCGTCGGGGGGAGGGCGTAGACAAAGTCGGGGTCAGGGTCAGA
GTCAGAGTCAACGGGGGGATTTGGGTTGGGTTGAGAGCTTGTTGATTGAT
TTGGTGGGGGATGATGTATGAATGCCCCCCGCCACCTCCCATAAAAAAGC
TAAAATATCTCATTCGGGTGATGAGAGTCGGTCTCTCTCCCCTCCGAGGC
TACAAACCCTGCCACGCAATTTTCTCATTGTTGCCCCGCGCTCGCAGAGG
AAGCGTCGACGGGATGAGTCCTTTCCACCCCGGCATGATCGAAACCGAGG
TGACTCGGTAGAGGTATACTCCATCATCTCAGATGGCAGCGACCCTCCTA
ACCCGCCGGGCACCGGGATCAATGCCCACATCTCACGCCTGACCCGGCTG
CAGCAGGCCGTGGATGCAAGAACAGGACGGGTGAAGACTGAAGCTCCAAT
CGAAGATGGCATATTCTCGCTGCAAGATACAGGGCGAGACTGCCCTCCTC
ACTTGACCATTGCCGAATCTCCAGCCCAATTGCCCTCAGACCTGATGAAC
AGTCTGATTGCAACCTATCTGGCCCGCGACTATGTGAACTGGCCGATCTT
CGATCTATCAGACTTCCAGTCGGCCCGTGAGAAGGTTGGCGACATGCAGG
ACCTCACGGCTGGGTCGAGTGGCCTCCACGCCATCCTCAAGATGATTTTG
TGTCTCTCTGGACTGAGATACCATCAAGTAGATGAAGCCTATCTGCAATC
TCTCTTCAATCACGCCCAGAGAATGACAAACAGCCCAGATTGGCAAGGCA
CGCCCTGGGTGCGCGTACAATGTCTCTTCCTACAATGCCAGTACCTCAAC
GCAACAGGGAAATCAAAGCAAGCCTGGGCCCTAATTGGCTACGCCATCCG
CACCATGCAAGCCCTAGGACTGCAGCCACAGACAAACGCGCATAACGGAC
GGGAACGACAGCAGCGCGAACTCGGCCGCAGGCTCTGGCACAGCGCAATC
ATCCTAGAGCGAATGCTAGCATTACAACTAGGCCTACCACCTCAGGTCTC
CAATCCCCTCCAGGTACATCTACCCACGCACCTGGACACCGACTACATCG
ACACCGTATCAGGCGGAGCGCCCAACTCCAGCGGAGACCGACCCTCGATC
ATCGAGCTTTTAATCGCATGCGCCAGACTCTACACCCACGTCGAAGAGAT
AACTGCTTGGGAATCTGAAGCAAGAATCCGACCAGACACCTGCGCCGCCA
AGAAGCTCCTCGCCCTGGACCTCTCCCCATTCCTGAAAACAGATGCTCTC
CTCTACGACTGGCAGACATCCCTGCCCTCATTCCTTCGCACCGACGAAAC
ATTCGAACTAGCCGATGACCCCATTGTTCGCCGCCAACGCCACACCCTGC
ACGCCCGTTACCTCTACCTTCGTCTCCGACTTTATCGGCCCCTTTTAGCT
CTGGGCCTCGCCCTGTCAGCCAAATGCACCTGCCGGTCAAACAAACACCC
TCACATGTCGGAGACAGACCCTTCTTCTTCTATCAACTCCCCTATACTGG
TTACCATCGTCCGCGACACCTCCCTCAAATGCGCCACCATCGCCGCAGAC
CTCGCCGACTTGATCGAAGAAACCGAGGACGGGCTGCTCGACGGCGGTCC
AGATGATACCTGGCGCAGCGCTGGATCGCCATACTGGGAGAATGTGGAGT
ATCTCTATGCCTGTGGGATTGTTATCCTGGCGGCGCGGCTGTGCTCCAGC
TCGGGCGTGGCGCAGCTGAAGAGGGCCTGGACGAGGGTTATTTCCTTGTT
GACAAGGTATGAAGGTTTCCGGGCTGGGGAGTATGCTCGTCTTGCGAGAT
TGGGGAGGAACACGCTTGAGAATCTGGCGGGTGCGTTGCAGAGGGATGTG
GGGGAGGCGATGGTGATGGGATTGGATGGGGAGACGAGGACGAGGTTGGT
GGGGAGAACAAGTGGTGGTGCTGTGGACTCGTCGGGGGGAGGGCGTAGAC
AAAGTCGGGGTCAGGGTCAGAGTCAGAGTCAACGGGGGGATTTGGGTTGG
GTTGAGAGCTTGTTGATTGATTTGGTGGGGGATGATGTATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2553787..2555808 + |
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