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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2569424..2571503- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012102-T1 ID=KJC3_012102-T1|Name=KJC3_012102-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2080bp|location=Sequence derived from alignment at ch8:2569424..2571503- (Aspergillus niger KJC3)
CCACAACGAGAAGACAAGAACAACAGGAAGTACAACGACCAGGCAGAAAC
CACGCACAAGGATAGGCCTCCCTCGTGCCTTCTCCATTGATCTGCAAGGT
GCATACGCATTATCTTCCTGATCCGACGCTGGCCGCCTCACCTGGACTAC
ACTCGATCTCTAGGAATGACCATTTTCCCGCAATTCATCGGCAATGGCGG
TGAAATCACTCTTCAATTGTCAAATTGACCCAATATAACTGACAACACAA
TCGTGAATCTCCAGCAGGATCGATCCGAGCCCCTTTCCGTAAGAAAGAAA
GAAAAGCAAGCACCGAGTCCAGCATGACCCTACCCACGGGCCCACAATTT
TACCCCGGCTTTCTCTCCACATGCTTAGAGTCCAACTTACATTCCACCGC
CAGCCATGAAAGCCTAACAAAGACCAAGCCTAAGCCCATCGTGCAAGAAT
GTGCTGGACTGGGAGCACCGCCTCGTGATGGAAACCTCCAAAGGGATAGG
AAAAGTCACCCGCTGACTGGGTCGGCATGCCGTTGCTGACCGATGGACAC
TGCGGAAACTAACTCGCTAATCAATATTTGCTTTATTTTAGTTCCCGAGA
TCACTCCCATTGGAATAGCTGTCGTCATACATCACAGTGACGACGATCCA
TCTCGTGTTCCAAGATCGCATGATGGCCACCCTTTAAATCGCACACGGAA
TGGTGGCACTTGATTGCTGTCCCCTATAAACGGAGACCAACCTTCTTTGT
CGCCTTTACAGCTTTCGCCTCGCGGTACTTGCGGTGTGTGATGCAACGGT
GATGATTGGCCCACCTGTCCATGCACGCTGCACCAAGCAGGTTCAAATTC
TTGATCAGGAGGTCTCGATGCCCCGACGGATAGCACGGATTGCTTCCCCG
GCCATTCAATATCAACTGGGTCAGTCCAGTATCGTGGCACCTGCGGTCTT
GATGCCGATGACTAACTATAAAACTAGGAAGTGAATCACATACTCCCGGA
GCTATGCAGCTTTCCCGTCTCGAAGTCAATTGAATTGGAATCTATACCAC
TCGTCCATACCCTTCTTCCCACCCAAGCAGCACCAGACTTCACCACATAG
GGCAGGGTAAATCAAGAATTGACGACAATGGTCCGTACCTCCTTGCTACC
CAAAACACTTCAATTAACACCAAACAGGAAGACCCGACAACCAACCATAC
CTACAGTCCACCCCTAGACAGCATTTTCCTCCTCCTGCCAATCCTCCTCC
TACCAACCATATTCCTCCTCCACCGTATCCACAAAGACTACCAAGCCTTC
CTCGCCCTCGGCCCCGGCGGCACTCCCTCGACCCCAACAGGCTACCTCCG
CATCTGCCTCCTTCGGCTCTTCACAATCAGGGACCCCTTCGAACCACCCT
CCCTTCCACTGACCCTCCTCCCCAAGACCGGCCTCCTAAACACCAGCAGC
CTCCCCCAACGCCATGGCCCGCGCCCCACCGTCGCGGGAATCGCTCCCCA
GCGCCAAATGACCCAAAAAGCCAATCCAGCCATGTACGAGACCCTCTCCC
ACGAGATCCAGCACCTCGTATCCCAAAACCCCGAGGCCCTCTACGAAGGG
ACCTCGTGTTTCGAAAAACATAGCACGGGCATGTTCTGCTCTAGCACCGA
CACACCCACTAGCACCCAGCAACAAGGTGGAGGCACACTCAAAGACCGCG
ACATCTCCTCACTGATGATGTCCCGCAACCAACAATGGCGTCATCGCCGC
ACCTGCAACGGAGAAGTGTGCCACGCGCATCCCAGCGACGGAAGTCTGCA
TCTAACGCTGCATCCGGCGGACGTGAAAGTTGTGATTGAACGGGGCTGGG
GCCAGCGGCATCCATTGACGCGAGAGAGCTGGTGGTGGTGTTATTTGAGG
ACCGTGCCGACGGGGTTCGTCATGATATATGCGCCGAGAAATCAAGAAGA
GTTGGAATGTGTCTTGAAGATTATACGTGCTGCTGCGTGGTGGGTGAGCG
GAGAGGAATTGGTGCAGCAGAAGACGCAGAAGCGGGAGGGTGGAATTGTT
CGTCGTCAAGTTGTGGAGGGATGCAGGTGA back to topCoding sequence (CDS) from alignment at ch8:2569424..2571503- >KJC3_012102-T1 ID=KJC3_012102-T1|Name=KJC3_012102-T1|organism=Aspergillus niger KJC3|type=CDS|length=1812bp|location=Sequence derived from alignment at ch8:2569424..2571503- (Aspergillus niger KJC3)
GAAGACCCGACAACCAACCATACCTACAGTCCACCCCTAGACAGCATTTT
CCTCCTCCTGCCAATCCTCCTCCTACCAACCATATTCCTCCTCCACCGTA
TCCACAAAGACTACCAAGCCTTCCTCGCCCTCGGCCCCGGCGGCACTCCC
TCGACCCCAACAGGCTACCTCCGCATCTGCCTCCTTCGGCTCTTCACAAT
CAGGGACCCCTTCGAACCACCCTCCCTTCCACTGACCCTCCTCCCCAAGA
CCGGCCTCCTAAACACCAGCAGCCTCCCCCAACGCCATGGCCCGCGCCCC
ACCGTCGCGGGAATCGCTCCCCAGCGCCAAATGACCCAAAAAGCCAATCC
AGCCATGTACGAGACCCTCTCCCACGAGATCCAGCACCTCGTATCCCAAA
ACCCCGAGGCCCTCTACGAAGGGACCTCGTGTTTCGAAAAACATAGCACG
GGCATGTTCTGCTCTAGCACCGACACACCCACTAGCACCCAGCAACAAGG
TGGAGGCACACTCAAAGACCGCGACATCTCCTCACTGATGATGTCCCGCA
ACCAACAATGGCGTCATCGCCGCACCTGCAACGGAGAAGTGTGCCACGCG
CATCCCAGCGACGGAAGTCTGCATCTAACGCTGCATCCGGCGGACGTGAA
AGTTGTGATTGAACGGGGCTGGGGCCAGCGGCATCCATTGACGCGAGAGA
GCTGGTGGTGGTGTTATTTGAGGACCGTGCCGACGGGGTTCGTCATGATA
TATGCGCCGAGAAATCAAGAAGAGTTGGAATGTGTCTTGAAGATTATACG
TGCTGCTGCGTGGTGGGTGAGCGGAGAGGAATTGGTGCAGCAGAAGACGC
AGAAGCGGGAGGGTGGAATTGTTCGTCGTCAAGTTGTGGAGGGATGCAGG
TGAATGGAAGACCCGACAACCAACCATACCTACAGTCCACCCCTAGACAG
CATTTTCCTCCTCCTGCCAATCCTCCTCCTACCAACCATATTCCTCCTCC
ACCGTATCCACAAAGACTACCAAGCCTTCCTCGCCCTCGGCCCCGGCGGC
ACTCCCTCGACCCCAACAGGCTACCTCCGCATCTGCCTCCTTCGGCTCTT
CACAATCAGGGACCCCTTCGAACCACCCTCCCTTCCACTGACCCTCCTCC
CCAAGACCGGCCTCCTAAACACCAGCAGCCTCCCCCAACGCCATGGCCCG
CGCCCCACCGTCGCGGGAATCGCTCCCCAGCGCCAAATGACCCAAAAAGC
CAATCCAGCCATGTACGAGACCCTCTCCCACGAGATCCAGCACCTCGTAT
CCCAAAACCCCGAGGCCCTCTACGAAGGGACCTCGTGTTTCGAAAAACAT
AGCACGGGCATGTTCTGCTCTAGCACCGACACACCCACTAGCACCCAGCA
ACAAGGTGGAGGCACACTCAAAGACCGCGACATCTCCTCACTGATGATGT
CCCGCAACCAACAATGGCGTCATCGCCGCACCTGCAACGGAGAAGTGTGC
CACGCGCATCCCAGCGACGGAAGTCTGCATCTAACGCTGCATCCGGCGGA
CGTGAAAGTTGTGATTGAACGGGGCTGGGGCCAGCGGCATCCATTGACGC
GAGAGAGCTGGTGGTGGTGTTATTTGAGGACCGTGCCGACGGGGTTCGTC
ATGATATATGCGCCGAGAAATCAAGAAGAGTTGGAATGTGTCTTGAAGAT
TATACGTGCTGCTGCGTGGTGGGTGAGCGGAGAGGAATTGGTGCAGCAGA
AGACGCAGAAGCGGGAGGGTGGAATTGTTCGTCGTCAAGTTGTGGAGGGA
TGCAGGTGAATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.5 |
| Note | antiSMASH:Cluster_8.4 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2569424..2571503 - |
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