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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2637651..2639629- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012127-T1 ID=KJC3_012127-T1|Name=KJC3_012127-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1979bp|location=Sequence derived from alignment at ch8:2637651..2639629- (Aspergillus niger KJC3)
GGCCTTCCTCTCCATCACCGCGGAGGTGCTGCAATCATCCATCTTCAACT
CCTCTTCTGTGAGCCTCGCTCTTCTTCTTCTGCCTCTTCTGCCTCTTCCT
CTTTCCCTTCTTATAATTTCCTCTTCTACTTTCAGGCAATTCGGTTGCTC
TGCCACCCATCCTGCCACTATTCCCTGCTGCGAGACCTTAAGCTTGCCAC
CTAACCTCTCGGCTCCCGCCCGACCCTTGTTTGTTGTCCCTTATTCGGCC
TAGTTGCGGAGGGTTCAATTCGTCCCTCTCCCACTTCTCGCGGTCGCTTC
TCTCTCCTATCCTTCATCTATATCCATTCTCGCCATGGCACAAATCCGTG
GCACTGCAGGCTACAATTTCGGCCACCAGAACCCCTTTGGGGGTCCTGGT
CGTGTAGAGGCTACGAGCGATCCGAGTCCCCTGGATGCTGTTCGCGAACA
GACGAGCAAAATTGAGGACTGGCTGGACACCATGTCCGACCCTGTCAAGC
CGTATGTGAGCCCTCAGACACTTCTGACTCTCATTACTCTGGTTCAGCCT
CCGTGCTGAAGAGGCGCCTTCGATTGCTCGCATGCGGGAAAAGGACTTGT
CACTGACACCGTGGCTTCTTCGCTGTTCAGGTATCTGCCAGCCATTGGTC
GCTTTCTGATCGTTGTCACCTTCATTGAGGACAGTCTACGCATGATTACC
CAATGGAACGATCAGCTCCTGTACCTTCGTGATTACCGGAAGAGTAAGCA
TGGCTTTGGTCCCGTCCCTCCTATATCCGGTCTCACCCGCCGTGGGGCCG
GATCGCAGATCGACTCTAACTTGGGCTTCGTCGCATAACAGTTCCCTGGG
GAATCACGCATACCTTCCTTATCGTCAACATGATCGCAATGGCGGCCTGC
TCGTTCATGGTCATTGCTCGTAGACACACGGAGTACGCCGTTGGCGGTCT
CTTGGCTGTCGTCATCGTTCAGGGTCTCGGTTACGGATTGATCTTCGACC
TCAACTTCTTCCTCCGCAACCTGAGTGTTGTCGGTGGCTTGCTCATGGTT
CTCTCTGACTCGTGGGTGCGCAAGAAGTTCGTCCCCGCCGGTCTTCCCCA
GCTCGATGAGAAGGACCGCAAGATGTACGTCCAGTTCGCTGGTCGTGTGC
TGCTGATCTTCCTCTTCATCGGATTCGTCTTCTCTGGCCAGTGGAGTCTC
TGGCGCATTATTGTCAGCCTGTTCGGCTTCGTCGCGTGTGTCATGGTCAT
TGTTGGATTCAAGGCCAAGTGGAGTGCGATCATGCTGGTCGTGTTGTTGA
GTGTGTTCAACGTCCTGGTCAACAACTTCTGGACCGTACGTCTGCCCCAT
GACAGGAAACTTTGTGCTGCGCAATAACTGACATTACCTTAGCTTCACCC
CCACCACCCTCACAAGGACTTCGCCAAGTACGACTTCTTCCAGATCCTGT
CCATTGTGTAAGCAGCCCTGAAGTTCACCATATCCCCAAGAATTGCAAAT
CACCTCTAGCTAACAATATACGCTCACTACAGCGGAGGTCTTCTCCTCCT
GGTCAACATGGGTCCCGGCCAATTGAGTATGGACGAGAAGAAGAAGGTCT
ACTAAGGAAAACAAACACCATACATAACCATTGAGTGCTGGGCATGTGAT
ATGATATTCCCGGGCCATGGGAAAGGACCCCCAATATATGAAACCTTTGT
TTTACTTTTTTCTCTCCATCTTCCTCTCTCGTGCTTTTTCTCCATTTTAT
CTTTTTGGGACAGAGAAACCATCTATTGTCCAGTCATACCACTATGTTAT
AAGCAAAGCAACACAACTACTACGAACATATCCTAGTCAAAAATCATAGC
ATCATCATTTCATCATCATCTCTAAAAAATGTGTTTTTTTTTTTTTTTTT
TTTTTATTTTTCGCTACCAATCTCTTAATAGGGAAATGCATGCCTCACTG
CTTGTCTTGACCTGGTTTGTTCATTATTC back to topCoding sequence (CDS) from alignment at ch8:2637651..2639629- >KJC3_012127-T1 ID=KJC3_012127-T1|Name=KJC3_012127-T1|organism=Aspergillus niger KJC3|type=CDS|length=4560bp|location=Sequence derived from alignment at ch8:2637651..2639629- (Aspergillus niger KJC3)
CGGAGGTCTTCTCCTCCTGGTCAACATGGGTCCCGGCCAATTGAGTATGG
ACGAGAAGAAGAAGGTCTACTAACTTCACCCCCACCACCCTCACAAGGAC
TTCGCCAAGTACGACTTCTTCCAGATCCTGTCCATTGTTTCCCTGGGGAA
TCACGCATACCTTCCTTATCGTCAACATGATCGCAATGGCGGCCTGCTCG
TTCATGGTCATTGCTCGTAGACACACGGAGTACGCCGTTGGCGGTCTCTT
GGCTGTCGTCATCGTTCAGGGTCTCGGTTACGGATTGATCTTCGACCTCA
ACTTCTTCCTCCGCAACCTGAGTGTTGTCGGTGGCTTGCTCATGGTTCTC
TCTGACTCGTGGGTGCGCAAGAAGTTCGTCCCCGCCGGTCTTCCCCAGCT
CGATGAGAAGGACCGCAAGATGTACGTCCAGTTCGCTGGTCGTGTGCTGC
TGATCTTCCTCTTCATCGGATTCGTCTTCTCTGGCCAGTGGAGTCTCTGG
CGCATTATTGTCAGCCTGTTCGGCTTCGTCGCGTGTGTCATGGTCATTGT
TGGATTCAAGGCCAAGTGGAGTGCGATCATGCTGGTCGTGTTGTTGAGTG
TGTTCAACGTCCTGGTCAACAACTTCTGGACCGTATCTGCCAGCCATTGG
TCGCTTTCTGATCGTTGTCACCTTCATTGAGGACAGTCTACGCATGATTA
CCCAATGGAACGATCAGCTCCTGTACCTTCGTGATTACCGGAAGAATGGC
ACAAATCCGTGGCACTGCAGGCTACAATTTCGGCCACCAGAACCCCTTTG
GGGGTCCTGGTCGTGTAGAGGCTACGAGCGATCCGAGTCCCCTGGATGCT
GTTCGCGAACAGACGAGCAAAATTGAGGACTGGCTGGACACCATGTCCGA
CCCTGTCAAGCCCGGAGGTCTTCTCCTCCTGGTCAACATGGGTCCCGGCC
AATTGAGTATGGACGAGAAGAAGAAGGTCTACTAACTTCACCCCCACCAC
CCTCACAAGGACTTCGCCAAGTACGACTTCTTCCAGATCCTGTCCATTGT
TTCCCTGGGGAATCACGCATACCTTCCTTATCGTCAACATGATCGCAATG
GCGGCCTGCTCGTTCATGGTCATTGCTCGTAGACACACGGAGTACGCCGT
TGGCGGTCTCTTGGCTGTCGTCATCGTTCAGGGTCTCGGTTACGGATTGA
TCTTCGACCTCAACTTCTTCCTCCGCAACCTGAGTGTTGTCGGTGGCTTG
CTCATGGTTCTCTCTGACTCGTGGGTGCGCAAGAAGTTCGTCCCCGCCGG
TCTTCCCCAGCTCGATGAGAAGGACCGCAAGATGTACGTCCAGTTCGCTG
GTCGTGTGCTGCTGATCTTCCTCTTCATCGGATTCGTCTTCTCTGGCCAG
TGGAGTCTCTGGCGCATTATTGTCAGCCTGTTCGGCTTCGTCGCGTGTGT
CATGGTCATTGTTGGATTCAAGGCCAAGTGGAGTGCGATCATGCTGGTCG
TGTTGTTGAGTGTGTTCAACGTCCTGGTCAACAACTTCTGGACCGTATCT
GCCAGCCATTGGTCGCTTTCTGATCGTTGTCACCTTCATTGAGGACAGTC
TACGCATGATTACCCAATGGAACGATCAGCTCCTGTACCTTCGTGATTAC
CGGAAGAATGGCACAAATCCGTGGCACTGCAGGCTACAATTTCGGCCACC
AGAACCCCTTTGGGGGTCCTGGTCGTGTAGAGGCTACGAGCGATCCGAGT
CCCCTGGATGCTGTTCGCGAACAGACGAGCAAAATTGAGGACTGGCTGGA
CACCATGTCCGACCCTGTCAAGCCCGGAGGTCTTCTCCTCCTGGTCAACA
TGGGTCCCGGCCAATTGAGTATGGACGAGAAGAAGAAGGTCTACTAACTT
CACCCCCACCACCCTCACAAGGACTTCGCCAAGTACGACTTCTTCCAGAT
CCTGTCCATTGTTTCCCTGGGGAATCACGCATACCTTCCTTATCGTCAAC
ATGATCGCAATGGCGGCCTGCTCGTTCATGGTCATTGCTCGTAGACACAC
GGAGTACGCCGTTGGCGGTCTCTTGGCTGTCGTCATCGTTCAGGGTCTCG
GTTACGGATTGATCTTCGACCTCAACTTCTTCCTCCGCAACCTGAGTGTT
GTCGGTGGCTTGCTCATGGTTCTCTCTGACTCGTGGGTGCGCAAGAAGTT
CGTCCCCGCCGGTCTTCCCCAGCTCGATGAGAAGGACCGCAAGATGTACG
TCCAGTTCGCTGGTCGTGTGCTGCTGATCTTCCTCTTCATCGGATTCGTC
TTCTCTGGCCAGTGGAGTCTCTGGCGCATTATTGTCAGCCTGTTCGGCTT
CGTCGCGTGTGTCATGGTCATTGTTGGATTCAAGGCCAAGTGGAGTGCGA
TCATGCTGGTCGTGTTGTTGAGTGTGTTCAACGTCCTGGTCAACAACTTC
TGGACCGTATCTGCCAGCCATTGGTCGCTTTCTGATCGTTGTCACCTTCA
TTGAGGACAGTCTACGCATGATTACCCAATGGAACGATCAGCTCCTGTAC
CTTCGTGATTACCGGAAGAATGGCACAAATCCGTGGCACTGCAGGCTACA
ATTTCGGCCACCAGAACCCCTTTGGGGGTCCTGGTCGTGTAGAGGCTACG
AGCGATCCGAGTCCCCTGGATGCTGTTCGCGAACAGACGAGCAAAATTGA
GGACTGGCTGGACACCATGTCCGACCCTGTCAAGCCCGGAGGTCTTCTCC
TCCTGGTCAACATGGGTCCCGGCCAATTGAGTATGGACGAGAAGAAGAAG
GTCTACTAACTTCACCCCCACCACCCTCACAAGGACTTCGCCAAGTACGA
CTTCTTCCAGATCCTGTCCATTGTTTCCCTGGGGAATCACGCATACCTTC
CTTATCGTCAACATGATCGCAATGGCGGCCTGCTCGTTCATGGTCATTGC
TCGTAGACACACGGAGTACGCCGTTGGCGGTCTCTTGGCTGTCGTCATCG
TTCAGGGTCTCGGTTACGGATTGATCTTCGACCTCAACTTCTTCCTCCGC
AACCTGAGTGTTGTCGGTGGCTTGCTCATGGTTCTCTCTGACTCGTGGGT
GCGCAAGAAGTTCGTCCCCGCCGGTCTTCCCCAGCTCGATGAGAAGGACC
GCAAGATGTACGTCCAGTTCGCTGGTCGTGTGCTGCTGATCTTCCTCTTC
ATCGGATTCGTCTTCTCTGGCCAGTGGAGTCTCTGGCGCATTATTGTCAG
CCTGTTCGGCTTCGTCGCGTGTGTCATGGTCATTGTTGGATTCAAGGCCA
AGTGGAGTGCGATCATGCTGGTCGTGTTGTTGAGTGTGTTCAACGTCCTG
GTCAACAACTTCTGGACCGTATCTGCCAGCCATTGGTCGCTTTCTGATCG
TTGTCACCTTCATTGAGGACAGTCTACGCATGATTACCCAATGGAACGAT
CAGCTCCTGTACCTTCGTGATTACCGGAAGAATGGCACAAATCCGTGGCA
CTGCAGGCTACAATTTCGGCCACCAGAACCCCTTTGGGGGTCCTGGTCGT
GTAGAGGCTACGAGCGATCCGAGTCCCCTGGATGCTGTTCGCGAACAGAC
GAGCAAAATTGAGGACTGGCTGGACACCATGTCCGACCCTGTCAAGCCCG
GAGGTCTTCTCCTCCTGGTCAACATGGGTCCCGGCCAATTGAGTATGGAC
GAGAAGAAGAAGGTCTACTAACTTCACCCCCACCACCCTCACAAGGACTT
CGCCAAGTACGACTTCTTCCAGATCCTGTCCATTGTTTCCCTGGGGAATC
ACGCATACCTTCCTTATCGTCAACATGATCGCAATGGCGGCCTGCTCGTT
CATGGTCATTGCTCGTAGACACACGGAGTACGCCGTTGGCGGTCTCTTGG
CTGTCGTCATCGTTCAGGGTCTCGGTTACGGATTGATCTTCGACCTCAAC
TTCTTCCTCCGCAACCTGAGTGTTGTCGGTGGCTTGCTCATGGTTCTCTC
TGACTCGTGGGTGCGCAAGAAGTTCGTCCCCGCCGGTCTTCCCCAGCTCG
ATGAGAAGGACCGCAAGATGTACGTCCAGTTCGCTGGTCGTGTGCTGCTG
ATCTTCCTCTTCATCGGATTCGTCTTCTCTGGCCAGTGGAGTCTCTGGCG
CATTATTGTCAGCCTGTTCGGCTTCGTCGCGTGTGTCATGGTCATTGTTG
GATTCAAGGCCAAGTGGAGTGCGATCATGCTGGTCGTGTTGTTGAGTGTG
TTCAACGTCCTGGTCAACAACTTCTGGACCGTATCTGCCAGCCATTGGTC
GCTTTCTGATCGTTGTCACCTTCATTGAGGACAGTCTACGCATGATTACC
CAATGGAACGATCAGCTCCTGTACCTTCGTGATTACCGGAAGAATGGCAC
AAATCCGTGGCACTGCAGGCTACAATTTCGGCCACCAGAACCCCTTTGGG
GGTCCTGGTCGTGTAGAGGCTACGAGCGATCCGAGTCCCCTGGATGCTGT
TCGCGAACAGACGAGCAAAATTGAGGACTGGCTGGACACCATGTCCGACC
CTGTCAAGCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012127-T1.utr3p1 | KJC3_012127-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012127-T1.utr5p1 | KJC3_012127-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002995 |
| DBxref | PFAM:PF02077 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2637651..2639629 - |
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