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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2664060..2666122- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012135-T1 ID=KJC3_012135-T1|Name=KJC3_012135-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2063bp|location=Sequence derived from alignment at ch8:2664060..2666122- (Aspergillus niger KJC3)
CCTCAACACTTTCAGTCCATCACCTCGACCCTCGCCCGTGCTTCCTGCGA
CCCATTCTCCTATCAATACACCTCTTTAATTCCCTTTTCTTCAACCACCG
TCACAATGGTCAAGCTTACCGAAGTCGAGGATGAGCACTTCTCCCAGGAG
AAGCCCATGCCCAGCAAGCACAATGTCCTTCTGACCTCGGACGACGAAGA
GGAAGACGACTACACTGACACCGGTTAGTATCCTGATGACCCATAATCAA
AGGCACAATTCAACCGGGCGCTCGTTTTGCATGAGCAATTGCATTTTCAT
TCTTATCCTCCGCGCAACAACATCCGGAAGCATTATCCATCCACGCCGAA
CCTGATCCATCTATTCATCCATTCATCGGCGCAGCCGTTCAAAACACATG
GCCTTCATTTTCTAACCTGCCATACGTACAGAGTCCGAAATCTCCGTCGA
GTCTGATCTTGAGGTCGATGGCGAGACCTTCTACGACCGTCTCTATGCCC
TGAAAGACATTGTTCCTCCTTCCACACGCCGCTCGGTCACCAGCACCGTC
GAGTCCATCACTTCCTTCACAAAGTCCAGCATCCAATTCAGCGGCAAGGC
GCTGTGGATCATCAGCACCAGTGCCTTCCTCCTTGGTGTCCCGTGGGCTC
TGGCCTACGCCGAAGAGGAGCAGTACATTCAGATGGAGCGCGAGCAGGGC
ATGATCAAGGGCGCCAACGAGGTACGTTACAGCCATGTTCAATTCCCATT
TTCATATTCGTCGGGCTATCTACTTGTCGCTTGGCTATTACTGTATTGTT
ACTGTCATGCGGCCTTGTCCGGGGCAGTTGGCGATGACGTGAAAACTCTT
TTCCGTTCTTATTATGTGCCAAGAACAAAGACACAGACGTCATTTGGATT
GCCCGCACATATTTCGATGGTCTGCAAAAACTCCGAGCAGCTGCTAATTA
CATTGTTTTCTATCATTAGATGCTTACGCCCGGCGCCCCCGGTGAAGAGA
AGCCCGCTCAACCCTCTTTGTAAATGAATACCGCTGCCGAAGATGAAGAT
CGCAACAGGTGGGAATAGTTGATTTGCCTTGGCCTGTCGAACCGCCACTA
CCTCAATATCGAGCCTGTCCGAAGCCACCTGTTGTCGTAAGGCCTATGGT
TTCTTATTGAATGTCGTCGGTCTTCCTGGAGCATAATGTCGACTTCCAGG
CGATGACGTTCATTGATGAGGTCACTGCACGAATCTAGTCGATTTCTCTG
TTCCAACAAAAAAAATACGAGCCAGACAACTTTGATTTAGCGATGCATGA
TTCGGATTACATTGGGTTAAAAGCAGGTGTGTACTATCGAGGATGGATAA
TCGCGAACATATTCAACTTATTGATTTGAGTTGACGCGAGGAAGATATAA
AAAGGATGGTATGGTTTCCATAAGGACATGAAGGAAAATCTTGCCCACCT
GTTACTGTTCGGAATCTCTGGCCCTGTTAACTTGACGCTTTTTCTCCTCT
CTCAACCTTTGATTCCAGAACTTCTGGCTTGGGCGATGTGTGTATTTCTA
TACTGGTTTATTTTCCCCTGGTTACAATGTTCGTTTCGTTTTATGTCTAT
TTCCACCATTTTGGAACTCATGTTTCTAGATAATGAAATGTGAATGATCT
TGAGATATATTCAGGACGGAACTCTCATGAGCCGAGTACATTTTCTCCTT
GCACTAGAAGGAGACAGGCCGAAAACAAAATAGCAGAAATAGGGTATCAC
AGCATGAAAGATATAGGTACAAGCCCCCGAACCGAGGGGCAAATGGATAT
GGACAAGAAGAATGGTGTAAAGGCGCGCATCCGAAGAAAGTGATGCTGAC
CAGGTGAAGAACTAACCACCCCAGACTGAGTACATAACGTCGTCCCGACA
GCACCCGTATATGGATCAAATATGTGCAAACGAACACATCTAGAAGCTTG
CACTATACTATCCAAGAGTCTATGATATGATATGGTCAGCAAATGCTCTC
AGCTGCCGCATCGATCTTGGAGCTCAAGATCAAAAACATACCGTGGTTTC
TCTTGCAGTCCGT back to topCoding sequence (CDS) from alignment at ch8:2664060..2666122- >KJC3_012135-T1 ID=KJC3_012135-T1|Name=KJC3_012135-T1|organism=Aspergillus niger KJC3|type=CDS|length=1386bp|location=Sequence derived from alignment at ch8:2664060..2666122- (Aspergillus niger KJC3)
ATGCTTACGCCCGGCGCCCCCGGTGAAGAGAAGCCCGCTCAACCCTCTTT
GTAAAGTCCGAAATCTCCGTCGAGTCTGATCTTGAGGTCGATGGCGAGAC
CTTCTACGACCGTCTCTATGCCCTGAAAGACATTGTTCCTCCTTCCACAC
GCCGCTCGGTCACCAGCACCGTCGAGTCCATCACTTCCTTCACAAAGTCC
AGCATCCAATTCAGCGGCAAGGCGCTGTGGATCATCAGCACCAGTGCCTT
CCTCCTTGGTGTCCCGTGGGCTCTGGCCTACGCCGAAGAGGAGCAGTACA
TTCAGATGGAGCGCGAGCAGGGCATGATCAAGGGCGCCAACGAGATGGTC
AAGCTTACCGAAGTCGAGGATGAGCACTTCTCCCAGGAGAAGCCCATGCC
CAGCAAGCACAATGTCCTTCTGACCTCGGACGACGAAGAGGAAGACGACT
ACACTGACACCGATGCTTACGCCCGGCGCCCCCGGTGAAGAGAAGCCCGC
TCAACCCTCTTTGTAAAGTCCGAAATCTCCGTCGAGTCTGATCTTGAGGT
CGATGGCGAGACCTTCTACGACCGTCTCTATGCCCTGAAAGACATTGTTC
CTCCTTCCACACGCCGCTCGGTCACCAGCACCGTCGAGTCCATCACTTCC
TTCACAAAGTCCAGCATCCAATTCAGCGGCAAGGCGCTGTGGATCATCAG
CACCAGTGCCTTCCTCCTTGGTGTCCCGTGGGCTCTGGCCTACGCCGAAG
AGGAGCAGTACATTCAGATGGAGCGCGAGCAGGGCATGATCAAGGGCGCC
AACGAGATGGTCAAGCTTACCGAAGTCGAGGATGAGCACTTCTCCCAGGA
GAAGCCCATGCCCAGCAAGCACAATGTCCTTCTGACCTCGGACGACGAAG
AGGAAGACGACTACACTGACACCGATGCTTACGCCCGGCGCCCCCGGTGA
AGAGAAGCCCGCTCAACCCTCTTTGTAAAGTCCGAAATCTCCGTCGAGTC
TGATCTTGAGGTCGATGGCGAGACCTTCTACGACCGTCTCTATGCCCTGA
AAGACATTGTTCCTCCTTCCACACGCCGCTCGGTCACCAGCACCGTCGAG
TCCATCACTTCCTTCACAAAGTCCAGCATCCAATTCAGCGGCAAGGCGCT
GTGGATCATCAGCACCAGTGCCTTCCTCCTTGGTGTCCCGTGGGCTCTGG
CCTACGCCGAAGAGGAGCAGTACATTCAGATGGAGCGCGAGCAGGGCATG
ATCAAGGGCGCCAACGAGATGGTCAAGCTTACCGAAGTCGAGGATGAGCA
CTTCTCCCAGGAGAAGCCCATGCCCAGCAAGCACAATGTCCTTCTGACCT
CGGACGACGAAGAGGAAGACGACTACACTGACACCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005741 | mitochondrial outer membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006886 | intracellular protein transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012135-T1.utr3p1 | KJC3_012135-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012135-T1.utr5p1 | KJC3_012135-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005683 |
| DBxref | PFAM:PF04281 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2664060..2666122 - |
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