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KJC3_012143-T1, KJC3_012143-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012143-T1
Unique NameKJC3_012143-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2688869..2689919-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012143-T1 ID=KJC3_012143-T1|Name=KJC3_012143-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1051bp|location=Sequence derived from alignment at ch8:2688869..2689919- (Aspergillus niger KJC3)
ATGCCTCCCCGGCTCCAATTGCTGCCCTTCCAATGGCAGCGGCCAATGGC
CACCACCACGACGAACCTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCC
ACCAACAGAGTCGGAACGCGCACATCCTCGCCTCGCTCTCCGATACCCAG
GGCGCCTACAACAAGCGCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAA
GGGTAAAACCTCCGGAAGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGG
TCCCCGCTGCGTTTAATGGTGGTCAAACGCCGGATATTATTGTTCATGGT
GAGAGGGGGTTTAATAATGTGTATGTTTTCCCCCTTCCCCTCCGCCCTTG
TCATCTTTGACACGGAGAGAAAGATGATCTTGAATAAATTCTAACGAGAA
TCAATGGGATCGGATAGTCACTCCATCGACCTCGCCCCCGTGAACCTCGA
CCGGATCCAATCCTGGATCGACCAAGGCCGCATCGACCCAACCCGCCCCA
TCACGGTCCGCGAACTCGCTCAGTCGCGCTGCATCCATCAGACCAAAGAA
GGCGTGAAGCTTCTCGGCCGCGGCGTGGAGAAGGACGACCACGAGGTTCC
CGTCGACAGTGTGCTCAAGCAGCCTATTCATATCGTTGTGTCGAGGGCTT
CGGCGTCTGCTATCGCGGCTGTTGAGGCGGCTGGTGGGTCTGTCACCACG
AGGTTCTATACCAAGTCTGCGATTGCGCGGATCATGAAGCGCGAGATGCA
TCCGTTTGTGTCGCTTGCGTGGACCAAGGAGAGTGGGAGTGAGGCGTTGG
CGGTTGGTGAGGATGGAGAGGCCTTGACGGAGTCGAAGGTTATGAAGGAG
ATGGGGTTCGCGTATAGATTGCCGGATCCGACTAAGAGAAGGGATATTGA
GTATTATAGGGACCCAGCGCATAGGGGGTACCTCAGTCATTTGCTGAAGC
CGATGGAAGGCCCGAGTTTGTTCTTCAGGTCGCCTGTGGAGCGGAAGTCT
GCTGCTGGTGTTAGGAAGGAGAAGGTGTTGCCTGAGAATAGGCTTTGGTG
A
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Coding sequence (CDS) from alignment at ch8:2688869..2689919-

>KJC3_012143-T1 ID=KJC3_012143-T1|Name=KJC3_012143-T1|organism=Aspergillus niger KJC3|type=CDS|length=1908bp|location=Sequence derived from alignment at ch8:2688869..2689919- (Aspergillus niger KJC3)
TCACTCCATCGACCTCGCCCCCGTGAACCTCGACCGGATCCAATCCTGGA
TCGACCAAGGCCGCATCGACCCAACCCGCCCCATCACGGTCCGCGAACTC
GCTCAGTCGCGCTGCATCCATCAGACCAAAGAAGGCGTGAAGCTTCTCGG
CCGCGGCGTGGAGAAGGACGACCACGAGGTTCCCGTCGACAGTGTGCTCA
AGCAGCCTATTCATATCGTTGTGTCGAGGGCTTCGGCGTCTGCTATCGCG
GCTGTTGAGGCGGCTGGTGGGTCTGTCACCACGAGGTTCTATACCAAGTC
TGCGATTGCGCGGATCATGAAGCGCGAGATGCATCCGTTTGTGTCGCTTG
CGTGGACCAAGGAGAGTGGGAGTGAGGCGTTGGCGGTTGGTGAGGATGGA
GAGGCCTTGACGGAGTCGAAGGTTATGAAGGAGATGGGGTTCGCGTATAG
ATTGCCGGATCCGACTAAGAGAAGGGATATTGAGTATTATAGGGACCCAG
CGCATAGGGGGTACCTCAGTCATTTGCTGAAGCCGATGGAAGGCCCGAGT
TTGTTCTTCAGGTCGCCTGTGGAGCGGAAGTCTGCTGCTGGTGTTAGGAA
GGAGAAGGTGTTGCCTGAGAATAGGCTTTGGTGAATGCCTCCCCGGCTCC
AATTGCTGCCCTTCCAATGGCAGCGGCCAATGGCCACCACCACGACGAAC
CTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCCACCAACAGAGTCGGAA
CGCGCACATCCTCGCCTCGCTCTCCGATACCCAGGGCGCCTACAACAAGC
GCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAAGGGTAAAACCTCCGGA
AGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGGTCCCCGCTGCGTTTAA
TGGTGGTCAAACGCCGGATATTATTGTTCATGGTGAGAGGGGGTTTAATA
ATGTTCACTCCATCGACCTCGCCCCCGTGAACCTCGACCGGATCCAATCC
TGGATCGACCAAGGCCGCATCGACCCAACCCGCCCCATCACGGTCCGCGA
ACTCGCTCAGTCGCGCTGCATCCATCAGACCAAAGAAGGCGTGAAGCTTC
TCGGCCGCGGCGTGGAGAAGGACGACCACGAGGTTCCCGTCGACAGTGTG
CTCAAGCAGCCTATTCATATCGTTGTGTCGAGGGCTTCGGCGTCTGCTAT
CGCGGCTGTTGAGGCGGCTGGTGGGTCTGTCACCACGAGGTTCTATACCA
AGTCTGCGATTGCGCGGATCATGAAGCGCGAGATGCATCCGTTTGTGTCG
CTTGCGTGGACCAAGGAGAGTGGGAGTGAGGCGTTGGCGGTTGGTGAGGA
TGGAGAGGCCTTGACGGAGTCGAAGGTTATGAAGGAGATGGGGTTCGCGT
ATAGATTGCCGGATCCGACTAAGAGAAGGGATATTGAGTATTATAGGGAC
CCAGCGCATAGGGGGTACCTCAGTCATTTGCTGAAGCCGATGGAAGGCCC
GAGTTTGTTCTTCAGGTCGCCTGTGGAGCGGAAGTCTGCTGCTGGTGTTA
GGAAGGAGAAGGTGTTGCCTGAGAATAGGCTTTGGTGAATGCCTCCCCGG
CTCCAATTGCTGCCCTTCCAATGGCAGCGGCCAATGGCCACCACCACGAC
GAACCTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCCACCAACAGAGTC
GGAACGCGCACATCCTCGCCTCGCTCTCCGATACCCAGGGCGCCTACAAC
AAGCGCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAAGGGTAAAACCTC
CGGAAGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGGTCCCCGCTGCGT
TTAATGGTGGTCAAACGCCGGATATTATTGTTCATGGTGAGAGGGGGTTT
AATAATGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012143KJC3_012143Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012143-T1KJC3_012143-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012143-T1.cdsKJC3_012143-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012143-T1.exon2KJC3_012143-T1.exon2Aspergillus niger KJC3exon
KJC3_012143-T1.exon1KJC3_012143-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09264A2D
DBxrefInterPro:IPR036227
DBxrefInterPro:IPR030878
DBxrefInterPro:IPR005749
DBxrefInterPro:IPR021131
DBxrefPFAM:PF00828
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2688869..2689919 -
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