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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2726983..2730796+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012152-T1 ID=KJC3_012152-T1|Name=KJC3_012152-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3814bp|location=Sequence derived from alignment at ch8:2726983..2730796+ (Aspergillus niger KJC3)
CAGTCGATGATTGACTCTCTCTTTCGCCCCAACTAGATACTTACTGCTCC
TCACACGCCCTACCCCCCAGACATATCCCATTTGGGTCATTCGGTGTTTT
GGCTTTCCCCCCGCATCATCGACCAATCTGGCCTGCTTGACGCTACTGAA
AACGGTGATCCCTTCCTTCGCGTTGAACGCTTGAATACTAGGGACTTTAC
TTTTCTGCTGCGCCGCGGTGGACGTGCTGCTCCTTGCGCCGTCGATCATC
TCCCAAACTCAGAAAAGATCCCAACCCCAAAAGAGGCAAAGCAGGAAAAA
ATAAAAAAATAAATAAAAAATTGATCTTAGGGAAGAGAAAAAGAAAAAGG
AAAAAAAAGGAAAGAACGCTACGAAATTAAGGACAGGAAACTGTGACGCC
GTCCCAAGGAAAATTCCACTGGTCGCACGACTCGCTGCAGCTGGGACTGT
GCGTAAGAGTCAACCTGAACTGAATATACTTCCCCAAGCCCAGTCTTCTA
CTTTCTCCATTTCGGTAAGTCGTCGATTCATCCCAAAACGTGCTTGCTTC
TTTACTGCTTTACTTTTTTCTAATTTTCCCTTTTCCCTTCCTTTTACCCT
TTGGCCCTGCTGCATTCCTTTCTTCCCTTCCTCTTTTTCTCTTTCTATCC
TTCTCCTTTCTTCTATCTTCCTTTATTACTCTTCATCTTCTACCTTGCGT
CTCCCTTGGTGACATCCCTCGCAATCCCGTGTAATCTCTCCCCTCTATAC
ATCAGCATACTACATCCATCTTGGGTACCTCACCTGCGCCTCTCTATATC
CGTCTTACCCGTGGTTGAAAATCAGCCTATCCGGACATCCGGCAGTCATC
TTTTGTCTTTCCTCTTTTTCCCTTAGGGTCTTCATTGCGTCTGGCAAATA
ATGCTCTGCGATTGGTGCTTTTCACGATGACGACTCACATCTCCCATCTC
GAACAGGATTTATCCGGTTCCGTGACCACTACAACTAGTGCCGTCTCCCA
CCTTTCCTGTGGCGCCCCCGATTCTGTGCCAATTTTTCACAGTCTCTTGA
GGTTTCGTTCCGATCATCGTCGGTCTTTAGAAACTTCGAGTGTAGTTGGC
GACACTGTTGCGGTCGAGCAAGTTCCACGGCCAGGCCATCGGCGGCGAGC
GTCCATACTTAGCAAGCTGGCGGGTCCGCGGGAAAACGCAAAGCGATTCC
TCCGCCTGGGGACCCCTATCCACCCGACTACTACCCTGACGCCACCCACT
CCCTCAATGCCCGAAACACATCGCCCTCGTCCGGTGTCTGAGATCTTTCT
GTCCCCCGATGATGCACAAATGCTTTCCAGCACGGGTTTGAGGACGGGCA
GGCTGCGCTCCCACTCTTCGTCGACTGTGTCGGCGTCCCAGCCTTCCCCG
ATTTCGGCTCAACCGGCAATCCCGGCGGCGGATCCATCGGTGCCGTTTCC
CACACTGCGCAATGAGAAGATCGTGGCGACCGGCAGTGGGATAACTGTTG
GTGTTGCGCTCACCGAACCCGTTCTGTTTCTTCAGGGATATGATCATAAT
GATCCCAGCACTAAAAAGTCCGCCATCTTGCGCGGGCAGCTGCATCTCAA
AATCACCAAGAGTGTCAAGGTCAAGAAGATCTCCATTTGTTTCCGCGGAC
ATGCTCAGACCGATTGGCCGGATGGTATGCACCCACCCATTGTTCTTCCT
CCAGGTGGCGTCATCACTAACGCTTTGTCTCATGTAGGCATTCCGCCCAA
GAAAGTCCACTTCCACGACAAGAAAGACCTCGTCACACATGGCGTCATGT
ATTTCAACCATGGAGATACTGCGCTAATGCAGAACGACTACGGCGCGCAC
TTCTACCAGCACGCCAAACCGGTGACGTCGGTGACGGGCAAGGATGGGCC
GACCACCAGCACTCGGGAGTTGCTCTCAAAGACCGGCTCGGCGACCTCGT
TGGGCCAGAACGGCCAGCTCACGACCAAGGATCTGAAGCGACTGTCTTTG
CAGTCCAATCATTCGCGCAGTTTCGGCAAGAATGACGCCCCGCCGCCCCC
GGTTCACACTCAGCGCAACTACCGGTTGTTCCCTGTCGGTGATTATCTGT
ATAGCTTCGAGTTTCCCATCGATGGATCTCTCCCAGAGACGATCAAGACT
GATCTGGGGTCTGTTCGGTACGATATCGAAGCGATCGTGGAACGGGCGGG
TGCGTTCCGCCCCAACCTGCTGGGTACGTTGGAAGTGCCGGTCATCCGCA
CGCCGGCAGAGGGCTCGTTGGAGCAGGTCGAGCCGATCGCCATCTCGCGA
AACTGGGAAGACCAACTGCATTATGACATTGTCATCTCGGGAAAGTCATT
CCCTCTTGGATCGCAGGTTCCCATTGCGTTCAAATTGACGCCGTTGGCGA
AGGTCGAGTGCCACCGCATCAAGGTGTATGTGACCGAAAACATTCAGCAC
TGGACTGCGGACAAGAGCGTCCATCGGTTTCAGCCAGCGAAGAAGGTGCT
GCTTTTCGAGAAACGGGCGGACTCGGCCAGTACCAGTACCTATCCAGGAA
GCTCAATGCGAGTGATGGCAGGTGGTGGTATCGACTGGGACCGTCGCGCG
GCTGCTGCGAGAGGTGAAGAGATTGTCGATCGGAACCGCACCAACCTCCT
TGGAAACCTCTCCAGCGACGCGGGGGTTGGCCCGACTGAGATGGAGTTCA
ACGTTCAGCTTCCCAGTTGCCAGGAGATGCGCAACCGGGATGAGTCCCAG
CGACTGCATTTTGACACCACGTATGAAAACATCCAAATCAACCATTGGAT
CAAGGTATGTCCTCATCCTTAGCATTCGAATCGCTCGATATTAACGTGGA
ATAGATTGTACTGCGGCTGTCCAAGGTTGACGAAAGAGATTCGGGTAAGC
GAAGACACTTCGAGATCTCGATCGACTCTCCATTCCACCTGCTTTCTTGC
AAGGCTACACAAGCGAATATCTACCTACCAGCATACACCTCGCCCGACTC
GGAGCCGCAGCCGCAGGCTCAGGAGTATGAATGTGGTTGTCCGGGGGCGC
CGCCCGTCAACAGGAATGGCTCTCGGAACGGCTCCAGCCGGCAGTCACTG
TCCTCTGACCGGGACGAGGTGCCACTCGGCGGCGCAGTTGCGAGAAGCTT
CACCAATGGTTCCGGCGGGCTGGCTCGACCTCCCCAGGCGCACTTGGCGG
ATGAGCCAACCGATCGAAATCCTGCGCCGCGACCGATGCATCTTCTGCGG
GCGCCATCATTTGCACCGCCCGCCTTTGAGGAAGTCCCGCCACCACCACC
ACTCGTGACGCCTCCCCCGGAGTATAACTCCATTGTTGGGGATAACGACA
GAGAATCGGTGCTGCAGGACTACTTCTCACGGCTATCCTTTTACGAGGAA
CATGCCGACGATGATCGGGGCCGCGGACGAGTTGATGTGCCTCTGACGCC
AGGAGGGCGTGTGAACCGCAGCATGGACGTCCCACGCGAGTGGGTGCGTC
TGGAGGAGTCGGCCGTCTAAGACTGACGAGCCGCATTTACGACGCTTATG
AGGATTGTACTTTTGTTTTAGAGGACGGTGGGAGTTTGTGATACAACCGG
CGTTTGATCCTTCCGGAGCAACGTAGGCTGGCCTCCTATCTGATTTATCT
GGTCTTGATTGGATATGGCGCCCGAGGAACAGGGATGTATTTGTGGCATT
GTTTGAGCGATCTTCCTCGTTCCTCGTACTATATACATACTGTTTATATT
ATGTTTAGATACCAGCTGTAGCAGATACAGCAGATGCATGGATTGAGTTA
TACGTTCACTTCAC back to topCoding sequence (CDS) from alignment at ch8:2726983..2730796+ >KJC3_012152-T1 ID=KJC3_012152-T1|Name=KJC3_012152-T1|organism=Aspergillus niger KJC3|type=CDS|length=6453bp|location=Sequence derived from alignment at ch8:2726983..2730796+ (Aspergillus niger KJC3)
ATGCCCGAAACACATCGCCCTCGTCCGGTGTCTGAGATCTTTCTGTCCCC
CGATGATGCACAAATGCTTTCCAGCACGGGTTTGAGGACGGGCAGGCTGC
GCTCCCACTCTTCGTCGACTGTGTCGGCGTCCCAGCCTTCCCCGATTTCG
GCTCAACCGGCAATCCCGGCGGCGGATCCATCGGTGCCGTTTCCCACACT
GCGCAATGAGAAGATCGTGGCGACCGGCAGTGGGATAACTGTTGGTGTTG
CGCTCACCGAACCCGTTCTGTTTCTTCAGGGATATGATCATAATGATCCC
AGCACTAAAAAGTCCGCCATCTTGCGCGGGCAGCTGCATCTCAAAATCAC
CAAGAGTGTCAAGGTCAAGAAGATCTCCATTTGTTTCCGCGGACATGCTC
AGACCGATTGGCCGGATGGCATTCCGCCCAAGAAAGTCCACTTCCACGAC
AAGAAAGACCTCGTCACACATGGCGTCATGTATTTCAACCATGGAGATAC
TGCGCTAATGCAGAACGACTACGGCGCGCACTTCTACCAGCACGCCAAAC
CGGTGACGTCGGTGACGGGCAAGGATGGGCCGACCACCAGCACTCGGGAG
TTGCTCTCAAAGACCGGCTCGGCGACCTCGTTGGGCCAGAACGGCCAGCT
CACGACCAAGGATCTGAAGCGACTGTCTTTGCAGTCCAATCATTCGCGCA
GTTTCGGCAAGAATGACGCCCCGCCGCCCCCGGTTCACACTCAGCGCAAC
TACCGGTTGTTCCCTGTCGGTGATTATCTGTATAGCTTCGAGTTTCCCAT
CGATGGATCTCTCCCAGAGACGATCAAGACTGATCTGGGGTCTGTTCGGT
ACGATATCGAAGCGATCGTGGAACGGGCGGGTGCGTTCCGCCCCAACCTG
CTGGGTACGTTGGAAGTGCCGGTCATCCGCACGCCGGCAGAGGGCTCGTT
GGAGCAGGTCGAGCCGATCGCCATCTCGCGAAACTGGGAAGACCAACTGC
ATTATGACATTGTCATCTCGGGAAAGTCATTCCCTCTTGGATCGCAGGTT
CCCATTGCGTTCAAATTGACGCCGTTGGCGAAGGTCGAGTGCCACCGCAT
CAAGGTGTATGTGACCGAAAACATTCAGCACTGGACTGCGGACAAGAGCG
TCCATCGGTTTCAGCCAGCGAAGAAGGTGCTGCTTTTCGAGAAACGGGCG
GACTCGGCCAGTACCAGTACCTATCCAGGAAGCTCAATGCGAGTGATGGC
AGGTGGTGGTATCGACTGGGACCGTCGCGCGGCTGCTGCGAGAGGTGAAG
AGATTGTCGATCGGAACCGCACCAACCTCCTTGGAAACCTCTCCAGCGAC
GCGGGGGTTGGCCCGACTGAGATGGAGTTCAACGTTCAGCTTCCCAGTTG
CCAGGAGATGCGCAACCGGGATGAGTCCCAGCGACTGCATTTTGACACCA
CGTATGAAAACATCCAAATCAACCATTGGATCAAGATTGTACTGCGGCTG
TCCAAGGTTGACGAAAGAGATTCGGGTAAGCGAAGACACTTCGAGATCTC
GATCGACTCTCCATTCCACCTGCTTTCTTGCAAGGCTACACAAGCGAATA
TCTACCTACCAGCATACACCTCGCCCGACTCGGAGCCGCAGCCGCAGGCT
CAGGAGTATGAATGTGGTTGTCCGGGGGCGCCGCCCGTCAACAGGAATGG
CTCTCGGAACGGCTCCAGCCGGCAGTCACTGTCCTCTGACCGGGACGAGG
TGCCACTCGGCGGCGCAGTTGCGAGAAGCTTCACCAATGGTTCCGGCGGG
CTGGCTCGACCTCCCCAGGCGCACTTGGCGGATGAGCCAACCGATCGAAA
TCCTGCGCCGCGACCGATGCATCTTCTGCGGGCGCCATCATTTGCACCGC
CCGCCTTTGAGGAAGTCCCGCCACCACCACCACTCGTGACGCCTCCCCCG
GAGTATAACTCCATTGTTGGGGATAACGACAGAGAATCGGTGCTGCAGGA
CTACTTCTCACGGCTATCCTTTTACGAGGAACATGCCGACGATGATCGGG
GCCGCGGACGAGTTGATGTGCCTCTGACGCCAGGAGGGCGTGTGAACCGC
AGCATGGACGTCCCACGCGAGTGGGTGCGTCTGGAGGAGTCGGCCGTCTA
AATGCCCGAAACACATCGCCCTCGTCCGGTGTCTGAGATCTTTCTGTCCC
CCGATGATGCACAAATGCTTTCCAGCACGGGTTTGAGGACGGGCAGGCTG
CGCTCCCACTCTTCGTCGACTGTGTCGGCGTCCCAGCCTTCCCCGATTTC
GGCTCAACCGGCAATCCCGGCGGCGGATCCATCGGTGCCGTTTCCCACAC
TGCGCAATGAGAAGATCGTGGCGACCGGCAGTGGGATAACTGTTGGTGTT
GCGCTCACCGAACCCGTTCTGTTTCTTCAGGGATATGATCATAATGATCC
CAGCACTAAAAAGTCCGCCATCTTGCGCGGGCAGCTGCATCTCAAAATCA
CCAAGAGTGTCAAGGTCAAGAAGATCTCCATTTGTTTCCGCGGACATGCT
CAGACCGATTGGCCGGATGGCATTCCGCCCAAGAAAGTCCACTTCCACGA
CAAGAAAGACCTCGTCACACATGGCGTCATGTATTTCAACCATGGAGATA
CTGCGCTAATGCAGAACGACTACGGCGCGCACTTCTACCAGCACGCCAAA
CCGGTGACGTCGGTGACGGGCAAGGATGGGCCGACCACCAGCACTCGGGA
GTTGCTCTCAAAGACCGGCTCGGCGACCTCGTTGGGCCAGAACGGCCAGC
TCACGACCAAGGATCTGAAGCGACTGTCTTTGCAGTCCAATCATTCGCGC
AGTTTCGGCAAGAATGACGCCCCGCCGCCCCCGGTTCACACTCAGCGCAA
CTACCGGTTGTTCCCTGTCGGTGATTATCTGTATAGCTTCGAGTTTCCCA
TCGATGGATCTCTCCCAGAGACGATCAAGACTGATCTGGGGTCTGTTCGG
TACGATATCGAAGCGATCGTGGAACGGGCGGGTGCGTTCCGCCCCAACCT
GCTGGGTACGTTGGAAGTGCCGGTCATCCGCACGCCGGCAGAGGGCTCGT
TGGAGCAGGTCGAGCCGATCGCCATCTCGCGAAACTGGGAAGACCAACTG
CATTATGACATTGTCATCTCGGGAAAGTCATTCCCTCTTGGATCGCAGGT
TCCCATTGCGTTCAAATTGACGCCGTTGGCGAAGGTCGAGTGCCACCGCA
TCAAGGTGTATGTGACCGAAAACATTCAGCACTGGACTGCGGACAAGAGC
GTCCATCGGTTTCAGCCAGCGAAGAAGGTGCTGCTTTTCGAGAAACGGGC
GGACTCGGCCAGTACCAGTACCTATCCAGGAAGCTCAATGCGAGTGATGG
CAGGTGGTGGTATCGACTGGGACCGTCGCGCGGCTGCTGCGAGAGGTGAA
GAGATTGTCGATCGGAACCGCACCAACCTCCTTGGAAACCTCTCCAGCGA
CGCGGGGGTTGGCCCGACTGAGATGGAGTTCAACGTTCAGCTTCCCAGTT
GCCAGGAGATGCGCAACCGGGATGAGTCCCAGCGACTGCATTTTGACACC
ACGTATGAAAACATCCAAATCAACCATTGGATCAAGATTGTACTGCGGCT
GTCCAAGGTTGACGAAAGAGATTCGGGTAAGCGAAGACACTTCGAGATCT
CGATCGACTCTCCATTCCACCTGCTTTCTTGCAAGGCTACACAAGCGAAT
ATCTACCTACCAGCATACACCTCGCCCGACTCGGAGCCGCAGCCGCAGGC
TCAGGAGTATGAATGTGGTTGTCCGGGGGCGCCGCCCGTCAACAGGAATG
GCTCTCGGAACGGCTCCAGCCGGCAGTCACTGTCCTCTGACCGGGACGAG
GTGCCACTCGGCGGCGCAGTTGCGAGAAGCTTCACCAATGGTTCCGGCGG
GCTGGCTCGACCTCCCCAGGCGCACTTGGCGGATGAGCCAACCGATCGAA
ATCCTGCGCCGCGACCGATGCATCTTCTGCGGGCGCCATCATTTGCACCG
CCCGCCTTTGAGGAAGTCCCGCCACCACCACCACTCGTGACGCCTCCCCC
GGAGTATAACTCCATTGTTGGGGATAACGACAGAGAATCGGTGCTGCAGG
ACTACTTCTCACGGCTATCCTTTTACGAGGAACATGCCGACGATGATCGG
GGCCGCGGACGAGTTGATGTGCCTCTGACGCCAGGAGGGCGTGTGAACCG
CAGCATGGACGTCCCACGCGAGTGGGTGCGTCTGGAGGAGTCGGCCGTCT
AAATGCCCGAAACACATCGCCCTCGTCCGGTGTCTGAGATCTTTCTGTCC
CCCGATGATGCACAAATGCTTTCCAGCACGGGTTTGAGGACGGGCAGGCT
GCGCTCCCACTCTTCGTCGACTGTGTCGGCGTCCCAGCCTTCCCCGATTT
CGGCTCAACCGGCAATCCCGGCGGCGGATCCATCGGTGCCGTTTCCCACA
CTGCGCAATGAGAAGATCGTGGCGACCGGCAGTGGGATAACTGTTGGTGT
TGCGCTCACCGAACCCGTTCTGTTTCTTCAGGGATATGATCATAATGATC
CCAGCACTAAAAAGTCCGCCATCTTGCGCGGGCAGCTGCATCTCAAAATC
ACCAAGAGTGTCAAGGTCAAGAAGATCTCCATTTGTTTCCGCGGACATGC
TCAGACCGATTGGCCGGATGGCATTCCGCCCAAGAAAGTCCACTTCCACG
ACAAGAAAGACCTCGTCACACATGGCGTCATGTATTTCAACCATGGAGAT
ACTGCGCTAATGCAGAACGACTACGGCGCGCACTTCTACCAGCACGCCAA
ACCGGTGACGTCGGTGACGGGCAAGGATGGGCCGACCACCAGCACTCGGG
AGTTGCTCTCAAAGACCGGCTCGGCGACCTCGTTGGGCCAGAACGGCCAG
CTCACGACCAAGGATCTGAAGCGACTGTCTTTGCAGTCCAATCATTCGCG
CAGTTTCGGCAAGAATGACGCCCCGCCGCCCCCGGTTCACACTCAGCGCA
ACTACCGGTTGTTCCCTGTCGGTGATTATCTGTATAGCTTCGAGTTTCCC
ATCGATGGATCTCTCCCAGAGACGATCAAGACTGATCTGGGGTCTGTTCG
GTACGATATCGAAGCGATCGTGGAACGGGCGGGTGCGTTCCGCCCCAACC
TGCTGGGTACGTTGGAAGTGCCGGTCATCCGCACGCCGGCAGAGGGCTCG
TTGGAGCAGGTCGAGCCGATCGCCATCTCGCGAAACTGGGAAGACCAACT
GCATTATGACATTGTCATCTCGGGAAAGTCATTCCCTCTTGGATCGCAGG
TTCCCATTGCGTTCAAATTGACGCCGTTGGCGAAGGTCGAGTGCCACCGC
ATCAAGGTGTATGTGACCGAAAACATTCAGCACTGGACTGCGGACAAGAG
CGTCCATCGGTTTCAGCCAGCGAAGAAGGTGCTGCTTTTCGAGAAACGGG
CGGACTCGGCCAGTACCAGTACCTATCCAGGAAGCTCAATGCGAGTGATG
GCAGGTGGTGGTATCGACTGGGACCGTCGCGCGGCTGCTGCGAGAGGTGA
AGAGATTGTCGATCGGAACCGCACCAACCTCCTTGGAAACCTCTCCAGCG
ACGCGGGGGTTGGCCCGACTGAGATGGAGTTCAACGTTCAGCTTCCCAGT
TGCCAGGAGATGCGCAACCGGGATGAGTCCCAGCGACTGCATTTTGACAC
CACGTATGAAAACATCCAAATCAACCATTGGATCAAGATTGTACTGCGGC
TGTCCAAGGTTGACGAAAGAGATTCGGGTAAGCGAAGACACTTCGAGATC
TCGATCGACTCTCCATTCCACCTGCTTTCTTGCAAGGCTACACAAGCGAA
TATCTACCTACCAGCATACACCTCGCCCGACTCGGAGCCGCAGCCGCAGG
CTCAGGAGTATGAATGTGGTTGTCCGGGGGCGCCGCCCGTCAACAGGAAT
GGCTCTCGGAACGGCTCCAGCCGGCAGTCACTGTCCTCTGACCGGGACGA
GGTGCCACTCGGCGGCGCAGTTGCGAGAAGCTTCACCAATGGTTCCGGCG
GGCTGGCTCGACCTCCCCAGGCGCACTTGGCGGATGAGCCAACCGATCGA
AATCCTGCGCCGCGACCGATGCATCTTCTGCGGGCGCCATCATTTGCACC
GCCCGCCTTTGAGGAAGTCCCGCCACCACCACCACTCGTGACGCCTCCCC
CGGAGTATAACTCCATTGTTGGGGATAACGACAGAGAATCGGTGCTGCAG
GACTACTTCTCACGGCTATCCTTTTACGAGGAACATGCCGACGATGATCG
GGGCCGCGGACGAGTTGATGTGCCTCTGACGCCAGGAGGGCGTGTGAACC
GCAGCATGGACGTCCCACGCGAGTGGGTGCGTCTGGAGGAGTCGGCCGTC
TAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012152-T1.utr3p1 | KJC3_012152-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR014756 |
| DBxref | InterPro:IPR011022 |
| DBxref | PFAM:PF02752 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2726983..2730796 + |
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