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KJC3_012160-T1, KJC3_012160-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012160-T1
Unique NameKJC3_012160-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2758927..2760566+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012160-T1 ID=KJC3_012160-T1|Name=KJC3_012160-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1640bp|location=Sequence derived from alignment at ch8:2758927..2760566+ (Aspergillus niger KJC3)
CTCAGGCCCTTGCTTGTCTCCATACTTCACCTCTATACACTTTTGCGCGT
GTTTCGCACGTGTAACGCGACTTTCTTCGAGCTAGCACCGAGGCCATTCG
GCGCGGGTGCCAGCTCTTGTCGTCATCTGAACATGGCATCCAATCTCCCT
ATCCCTATTCCTCCGCGCACCCCGACGCCTCCCCCGGATGATTCCCCTAG
CACTTCGAACCAGTCACCCCGGCTCCAAGACAAAGACTCATTATCACCAT
TGAGGGACACGTTTCCCAATTTGCGGGGCTCGTTAGATCCCAGTGATGCC
AATCGCTTGAGTCCTACACGGGCGGGTTTCAACCTCAGCCCAGCAGACGC
ATTACAGCCGAGTGATCAGAGCGACAATGCTTCAGCAGGACCATTCAATT
TCAAGACTACGACTATGGCGAAGAGTCCGGTCGTGAAGTCTGTGAGTCGT
TGCTTACTTCCACCTTGGAGTTGATTATACTAATGGAGCCGCCAATGCGA
CGTAGAACATTGGCCAGCGACGTGGACACAAATATAAGCACAGTAGCATT
TCGCATCAGATCTTCTTAGAACCGCCCCCACGAGCGCCTCTGGCTCTGCC
CAACTCGCTGCCCATACCGACGTTCAAAGAATATCGCTCCAGTATGTCCA
AGGACCAGACCACCCGGTTCTGGTGGAGCGTTTGCCATATGTCTGTTGCC
GCATATACCTTGTGGAGTGCCCATGGGTCTCTGGCTATGACGGCTCTGTC
GCACTTGATACTGTTTGATTCAATCGGCGCATTGCTCTGCGTTGCTGTCG
ACATCCTGGGCAACTTTGAAGTATGGAAGCGATCCAGTGTTCGACACCCG
TTCGGTCTGGAGCGCGCAGAAGTGCTTGCAGGGTTCGCCATGTGCGTACT
CTTGCTATTCATGGGGATGGATCTCATTTCCCATAGTCTGCAACACTTCC
TGGAGTCTTCCGGTCATGAACCTCACCATACCCATGTTCACGAACGTGTC
TCCCTTGGTCGTGTGGATTTTACCGCTCTGCTGGCCATCTCATCAACATT
GATTTCTGCCATCGGTCTCAAGAACCATGGACGGATAGGAAAGGCGATGC
GGTTCGGGTACATTGAGTCACTGCCCTCGGTTCTTAGTAACCCGTCCCAT
TTCCTGACGCTATCATGCTCCACGCTGCTCCTCTTACTGCCCCTCGTCTC
CATCAAGCTCTACAATTGGCTGGATGTTCTACTTTCCAGCACGATCTCCA
TCTCCATGTGTGTTATCGGAGTGCGCCTAGTGAAAACACTGGGATCCATG
CTTCTCATGTCCTACTCCGGACCGGGGGTGTCCGAGGTGATCCGAGATAT
CGAGGCCGATCCCTGCGTCTACGGCGTCGACGATGCCCGGTTCTGGCAGG
TTCATTACGGGCTCTGCATGGCTAACCTAAAGCTCCGAGTATCCGGAACC
GAGGAAAACCTTGTGCGACTGCGTGAACGGGTAGCCAGCCTCATCAAGAA
CCGGTTGGGTGGAGGGTACGGATCCGGGGGGCAGAAATGGGAAGTTTCGC
TGCAGTTTACGGCTGAGAAGGCTTGAACTGGCAGATGTCTTTGCTGTACA
TATACGATATTTGGCTTCTAATGAAGATATACCGAAATCA
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Coding sequence (CDS) from alignment at ch8:2758927..2760566+

>KJC3_012160-T1 ID=KJC3_012160-T1|Name=KJC3_012160-T1|organism=Aspergillus niger KJC3|type=CDS|length=2760bp|location=Sequence derived from alignment at ch8:2758927..2760566+ (Aspergillus niger KJC3)
ATGGCATCCAATCTCCCTATCCCTATTCCTCCGCGCACCCCGACGCCTCC
CCCGGATGATTCCCCTAGCACTTCGAACCAGTCACCCCGGCTCCAAGACA
AAGACTCATTATCACCATTGAGGGACACGTTTCCCAATTTGCGGGGCTCG
TTAGATCCCAGTGATGCCAATCGCTTGAGTCCTACACGGGCGGGTTTCAA
CCTCAGCCCAGCAGACGCATTACAGCCGAGTGATCAGAGCGACAATGCTT
CAGCAGGACCATTCAATTTCAAGACTACGACTATGGCGAAGAGTCCGGTC
GTGAAGTCTAACATTGGCCAGCGACGTGGACACAAATATAAGCACAGTAG
CATTTCGCATCAGATCTTCTTAGAACCGCCCCCACGAGCGCCTCTGGCTC
TGCCCAACTCGCTGCCCATACCGACGTTCAAAGAATATCGCTCCAGTATG
TCCAAGGACCAGACCACCCGGTTCTGGTGGAGCGTTTGCCATATGTCTGT
TGCCGCATATACCTTGTGGAGTGCCCATGGGTCTCTGGCTATGACGGCTC
TGTCGCACTTGATACTGTTTGATTCAATCGGCGCATTGCTCTGCGTTGCT
GTCGACATCCTGGGCAACTTTGAAGTATGGAAGCGATCCAGTGTTCGACA
CCCGTTCGGTCTGGAGCGCGCAGAAGTGCTTGCAGGGTTCGCCATGTGCG
TACTCTTGCTATTCATGGGGATGGATCTCATTTCCCATAGTCTGCAACAC
TTCCTGGAGTCTTCCGGTCATGAACCTCACCATACCCATGTTCACGAACG
TGTCTCCCTTGGTCGTGTGGATTTTACCGCTCTGCTGGCCATCTCATCAA
CATTGATTTCTGCCATCGGTCTCAAGAACCATGGACGGATAGGAAAGGCG
ATGCGGTTCGGGTACATTGAGTCACTGCCCTCGGTTCTTAGTAACCCGTC
CCATTTCCTGACGCTATCATGCTCCACGCTGCTCCTCTTACTGCCCCTCG
TCTCCATCAAGCTCTACAATTGGCTGGATGTTCTACTTTCCAGCACGATC
TCCATCTCCATGTGTGTTATCGGAGTGCGCCTAGTGAAAACACTGGGATC
CATGCTTCTCATGTCCTACTCCGGACCGGGGGTGTCCGAGGTGATCCGAG
ATATCGAGGCCGATCCCTGCGTCTACGGCGTCGACGATGCCCGGTTCTGG
CAGGTTCATTACGGGCTCTGCATGGCTAACCTAAAGCTCCGAGTATCCGG
AACCGAGGAAAACCTTGTGCGACTGCGTGAACGGGTAGCCAGCCTCATCA
AGAACCGGTTGGGTGGAGGGTACGGATCCGGGGGGCAGAAATGGGAAGTT
TCGCTGCAGTTTACGGCTGAGAAGGCTTGAATGGCATCCAATCTCCCTAT
CCCTATTCCTCCGCGCACCCCGACGCCTCCCCCGGATGATTCCCCTAGCA
CTTCGAACCAGTCACCCCGGCTCCAAGACAAAGACTCATTATCACCATTG
AGGGACACGTTTCCCAATTTGCGGGGCTCGTTAGATCCCAGTGATGCCAA
TCGCTTGAGTCCTACACGGGCGGGTTTCAACCTCAGCCCAGCAGACGCAT
TACAGCCGAGTGATCAGAGCGACAATGCTTCAGCAGGACCATTCAATTTC
AAGACTACGACTATGGCGAAGAGTCCGGTCGTGAAGTCTAACATTGGCCA
GCGACGTGGACACAAATATAAGCACAGTAGCATTTCGCATCAGATCTTCT
TAGAACCGCCCCCACGAGCGCCTCTGGCTCTGCCCAACTCGCTGCCCATA
CCGACGTTCAAAGAATATCGCTCCAGTATGTCCAAGGACCAGACCACCCG
GTTCTGGTGGAGCGTTTGCCATATGTCTGTTGCCGCATATACCTTGTGGA
GTGCCCATGGGTCTCTGGCTATGACGGCTCTGTCGCACTTGATACTGTTT
GATTCAATCGGCGCATTGCTCTGCGTTGCTGTCGACATCCTGGGCAACTT
TGAAGTATGGAAGCGATCCAGTGTTCGACACCCGTTCGGTCTGGAGCGCG
CAGAAGTGCTTGCAGGGTTCGCCATGTGCGTACTCTTGCTATTCATGGGG
ATGGATCTCATTTCCCATAGTCTGCAACACTTCCTGGAGTCTTCCGGTCA
TGAACCTCACCATACCCATGTTCACGAACGTGTCTCCCTTGGTCGTGTGG
ATTTTACCGCTCTGCTGGCCATCTCATCAACATTGATTTCTGCCATCGGT
CTCAAGAACCATGGACGGATAGGAAAGGCGATGCGGTTCGGGTACATTGA
GTCACTGCCCTCGGTTCTTAGTAACCCGTCCCATTTCCTGACGCTATCAT
GCTCCACGCTGCTCCTCTTACTGCCCCTCGTCTCCATCAAGCTCTACAAT
TGGCTGGATGTTCTACTTTCCAGCACGATCTCCATCTCCATGTGTGTTAT
CGGAGTGCGCCTAGTGAAAACACTGGGATCCATGCTTCTCATGTCCTACT
CCGGACCGGGGGTGTCCGAGGTGATCCGAGATATCGAGGCCGATCCCTGC
GTCTACGGCGTCGACGATGCCCGGTTCTGGCAGGTTCATTACGGGCTCTG
CATGGCTAACCTAAAGCTCCGAGTATCCGGAACCGAGGAAAACCTTGTGC
GACTGCGTGAACGGGTAGCCAGCCTCATCAAGAACCGGTTGGGTGGAGGG
TACGGATCCGGGGGGCAGAAATGGGAAGTTTCGCTGCAGTTTACGGCTGA
GAAGGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008324cation transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012160KJC3_012160Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012160-T1.utr5p1KJC3_012160-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012160-T1.exon1KJC3_012160-T1.exon1Aspergillus niger KJC3exon
KJC3_012160-T1.exon2KJC3_012160-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012160-T1.cdsKJC3_012160-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012160-T1.utr3p1KJC3_012160-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012160-T1KJC3_012160-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR002524
DBxrefInterPro:IPR027469
DBxrefPFAM:PF01545
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2758927..2760566 +
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