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KJC3_012163-T1, KJC3_012163-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012163-T1
Unique NameKJC3_012163-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2764896..2766494-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012163-T1 ID=KJC3_012163-T1|Name=KJC3_012163-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1599bp|location=Sequence derived from alignment at ch8:2764896..2766494- (Aspergillus niger KJC3)
CTGTGTTGGTTGTTGGTCAGTGTCTGGAGAGTAGTACTTACTGAATGAAT
CCCTTCTCCCTCTCTCACACACACTCACACTCTCCTTATTGCTGCTGATG
CTGATGCTGCTGCTGATGCTCTGGTGGAGTCAATGCGTGATTGATAAAGT
CGCCGATATCCCCTCTCACTCCCCGCCTTCTCCTGAGACAGATTACCATT
GTATTGTCCCCTGATTTCATCTCTGCTTTCTGACACAAGTTGTGGTGTCG
ACTTGTCTGGGTATTCCCGGTATAGCTTCACTCGCCATTCATTTTCGGTA
AGTGAGCATTCTTTGTGCTCCCATTGTCTTGTTGTCCTTCTAACAGTCCG
AACAAACCCCTTGTCTTACTTCCCCTCTTTCTTTTCCTTCTTCTTCTTCT
TCCTCCTTTATAGCCATTGATGAACCCCGAGTAGTATTCCCTTGCATACA
TGCTCATAAACAATAGGTTTCTCTTCGCTGGGAACTATATGTCCCACCAG
CACACCGAATTGAACCAGATGTCCACCCACATCCTCACGCAGGACAGATA
CTAAGACACTCTCTCCAAGCATCTCAATCCCAATCCTAGTACTACTACAG
ATCCCCATCACCAAAATGAGCACCATCCCAAGCGTCCACATCAACGACAA
AAGCCCCATAGAGGAGCACCACCAACACGACTCCACCTCCACCTCCCCAA
CAACCCGCAAATCCCTGCATCAGAACATCTTCGGCAAGCTACGACCCCTC
CCCTTCCAATACCACTGGACTGTCTGGTACGACCGTCACACCGACGCCCC
AGCAGCATCAAGCGCAACCGCAACAGCAGACTACGACTCCCGTCTATACG
TCCTGCACGAGGATGTCGCCGATATCGCCACCTTCTACCGCGTGTACAAC
AACTACCCCTGGGACAAGATCCGCCTGCGCGACACCGTCCATATCTTTCG
CAAAGGCGTGAGACCCGTCTGGGAAGACCCCGAGAATCGGAATGGGGGGT
GCTGGCGCTTCCGTGTTCCGAAGAGTAAAGCCCAAGCTTTCTTTCATGAG
ATTGCTATTCTGTGTATGGCGAACGAGTTTCAGGCTGTTTTGGAGAAGGG
TTAGTCATCTTTTCCTTCTTTCATCTGTTCTGTTTTTCTATGGTCTAGTA
GATACACAACGGGTAAGTTTGGGACATACACTAACAAGACAATGGGGGAA
ATATAGAACACGACCACGTCCTCGGAGTCTCAACCTCCGTCCGCTTCAAC
TCGCACCTCATCTCCGTCTGGAACAAGCTCGGCTCCAACGACCGGTCTAT
CAAGGCTCTCGAGAAAACCATTATTGATCGATTATCCCCTGAACTACGGC
CCACGGGGACGGGGTCCACTGCCTACTTTTACAAGCGACATGATGAGAAT
GATGGGTTTAAGGAGGCTGTGGAGAGGAGTAAGACATGATTTGATTCTTT
CTGAGGGTGGTGTGAATAGGCTGGCACCCTAGATAGAGAGAGAGAGGGAC
TGGGATTTGCTGATATGGAAGGGCTTATGGACCATCTTTGCATGTGCATA
TGTAGACTATATTAGCTGGAAATAGAGATGTTATCTCATTGTCGTATTA
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Coding sequence (CDS) from alignment at ch8:2764896..2766494-

>KJC3_012163-T1 ID=KJC3_012163-T1|Name=KJC3_012163-T1|organism=Aspergillus niger KJC3|type=CDS|length=1434bp|location=Sequence derived from alignment at ch8:2764896..2766494- (Aspergillus niger KJC3)
AACACGACCACGTCCTCGGAGTCTCAACCTCCGTCCGCTTCAACTCGCAC
CTCATCTCCGTCTGGAACAAGCTCGGCTCCAACGACCGGTCTATCAAGGC
TCTCGAGAAAACCATTATTGATCGATTATCCCCTGAACTACGGCCCACGG
GGACGGGGTCCACTGCCTACTTTTACAAGCGACATGATGAGAATGATGGG
TTTAAGGAGGCTGTGGAGAGGAGTAAGACATGAATGAGCACCATCCCAAG
CGTCCACATCAACGACAAAAGCCCCATAGAGGAGCACCACCAACACGACT
CCACCTCCACCTCCCCAACAACCCGCAAATCCCTGCATCAGAACATCTTC
GGCAAGCTACGACCCCTCCCCTTCCAATACCACTGGACTGTCTGGTACGA
CCGTCACACCGACGCCCCAGCAGCATCAAGCGCAACCGCAACAGCAGACT
ACGACTCCCGTCTATACGTCCTGCACGAGGATGTCGCCGATATCGCCACC
TTCTACCGCGTGTACAACAACTACCCCTGGGACAAGATCCGCCTGCGCGA
CACCGTCCATATCTTTCGCAAAGGCGTGAGACCCGTCTGGGAAGACCCCG
AGAATCGGAATGGGGGGTGCTGGCGCTTCCGTGTTCCGAAGAGTAAAGCC
CAAGCTTTCTTTCATGAGATTGCTATTCTGTGTATGGCGAACGAGTTTCA
GGCTGTTTTGGAGAAGGAACACGACCACGTCCTCGGAGTCTCAACCTCCG
TCCGCTTCAACTCGCACCTCATCTCCGTCTGGAACAAGCTCGGCTCCAAC
GACCGGTCTATCAAGGCTCTCGAGAAAACCATTATTGATCGATTATCCCC
TGAACTACGGCCCACGGGGACGGGGTCCACTGCCTACTTTTACAAGCGAC
ATGATGAGAATGATGGGTTTAAGGAGGCTGTGGAGAGGAGTAAGACATGA
ATGAGCACCATCCCAAGCGTCCACATCAACGACAAAAGCCCCATAGAGGA
GCACCACCAACACGACTCCACCTCCACCTCCCCAACAACCCGCAAATCCC
TGCATCAGAACATCTTCGGCAAGCTACGACCCCTCCCCTTCCAATACCAC
TGGACTGTCTGGTACGACCGTCACACCGACGCCCCAGCAGCATCAAGCGC
AACCGCAACAGCAGACTACGACTCCCGTCTATACGTCCTGCACGAGGATG
TCGCCGATATCGCCACCTTCTACCGCGTGTACAACAACTACCCCTGGGAC
AAGATCCGCCTGCGCGACACCGTCCATATCTTTCGCAAAGGCGTGAGACC
CGTCTGGGAAGACCCCGAGAATCGGAATGGGGGGTGCTGGCGCTTCCGTG
TTCCGAAGAGTAAAGCCCAAGCTTTCTTTCATGAGATTGCTATTCTGTGT
ATGGCGAACGAGTTTCAGGCTGTTTTGGAGAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012163KJC3_012163Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012163-T1KJC3_012163-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012163-T1.cdsKJC3_012163-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012163-T1.utr3p1KJC3_012163-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012163-T1.exon3KJC3_012163-T1.exon3Aspergillus niger KJC3exon
KJC3_012163-T1.exon2KJC3_012163-T1.exon2Aspergillus niger KJC3exon
KJC3_012163-T1.exon1KJC3_012163-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012163-T1.utr5p2KJC3_012163-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012163-T1.utr5p1KJC3_012163-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023398
DBxrefInterPro:IPR001040
DBxrefPFAM:PF01652
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2764896..2766494 -
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