You are here

Home

KJC3_012164-T1, KJC3_012164-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012164-T1
Unique NameKJC3_012164-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2766749..2767624+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012164-T1 ID=KJC3_012164-T1|Name=KJC3_012164-T1|organism=Aspergillus niger KJC3|type=mRNA|length=876bp|location=Sequence derived from alignment at ch8:2766749..2767624+ (Aspergillus niger KJC3)
CTGTTACTTTTCTTTTCAACCCATCTTTCTGTTCCATTATTGAAGCAATA
ACATGCCCTTCACTACGAAGTGCCTGGGAGCCGATCCCTCCTCCACTACC
ACTACCACTACCGCCGCTCGCGATCTCGATCGGCGCGAACACTCCCCCAC
TGATGACGACCATCTCCAACACACCGCTACCTCCACCACTGGCCGTGAGG
AAGATGAGGATGACGACGATGACTACACATCCTCGTCTGGGTCTAGCGAT
AGCGACAGCGACAGCGACGATGATGAGGAAGAAGAAGAAGAAGAAGAAGA
AGAAGAAGAAGAAGAGCAAGTAAACCAGAAGGAGACTACGAAATCAGAGT
CTACACCCACCACAACTACCTCGGACGATATCCCGCGCATTCGTGCTATA
CCTAAACCGCGCATCCACCGCATCAACAAAAACCCGGACTTGCTGTCCCG
GCTATCTGCTTTCCTGCCGCAGATGAAATCTGCGAATGAGAAGCTCGAGC
AGGAGATTGCGGCGGGAAGGGGCAAGGATGTGCGATTGGAATTGGATGGG
GATGATGATGATGATGAGGATATGGAAGGGAAGCGGTATATTGAAATGGT
ATGGACTATATAATTCCTAAATCTGGCTGATGGGATGCTAATAGTGTGCA
GAATCTGGGACTAGGTGTTCTAGAAGAGAAGCGGCCGGGAGATGATGACG
AAGAGGATAATGCCGAGTCAAAGGGTGACCAGAACAATCAACATGTCCTG
CCTGAGAGGCCGAAGTCTGGAAAAGACTCGAATGTGCTGGATACTCTGAT
GGGGAATGTGGATTCTTCAGTGGAGAAGGAGAAGCCGACGATCGAGGAGA
TATAGGAAGTTTGCTGATTGCATGGG
back to top

Coding sequence (CDS) from alignment at ch8:2766749..2767624+

>KJC3_012164-T1 ID=KJC3_012164-T1|Name=KJC3_012164-T1|organism=Aspergillus niger KJC3|type=CDS|length=1500bp|location=Sequence derived from alignment at ch8:2766749..2767624+ (Aspergillus niger KJC3)
ATGCCCTTCACTACGAAGTGCCTGGGAGCCGATCCCTCCTCCACTACCAC
TACCACTACCGCCGCTCGCGATCTCGATCGGCGCGAACACTCCCCCACTG
ATGACGACCATCTCCAACACACCGCTACCTCCACCACTGGCCGTGAGGAA
GATGAGGATGACGACGATGACTACACATCCTCGTCTGGGTCTAGCGATAG
CGACAGCGACAGCGACGATGATGAGGAAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAAGAGCAAGTAAACCAGAAGGAGACTACGAAATCAGAGTCT
ACACCCACCACAACTACCTCGGACGATATCCCGCGCATTCGTGCTATACC
TAAACCGCGCATCCACCGCATCAACAAAAACCCGGACTTGCTGTCCCGGC
TATCTGCTTTCCTGCCGCAGATGAAATCTGCGAATGAGAAGCTCGAGCAG
GAGATTGCGGCGGGAAGGGGCAAGGATGTGCGATTGGAATTGGATGGGGA
TGATGATGATGATGAGGATATGGAAGGGAAGCGGTATATTGAAATGAATC
TGGGACTAGGTGTTCTAGAAGAGAAGCGGCCGGGAGATGATGACGAAGAG
GATAATGCCGAGTCAAAGGGTGACCAGAACAATCAACATGTCCTGCCTGA
GAGGCCGAAGTCTGGAAAAGACTCGAATGTGCTGGATACTCTGATGGGGA
ATGTGGATTCTTCAGTGGAGAAGGAGAAGCCGACGATCGAGGAGATATAG
ATGCCCTTCACTACGAAGTGCCTGGGAGCCGATCCCTCCTCCACTACCAC
TACCACTACCGCCGCTCGCGATCTCGATCGGCGCGAACACTCCCCCACTG
ATGACGACCATCTCCAACACACCGCTACCTCCACCACTGGCCGTGAGGAA
GATGAGGATGACGACGATGACTACACATCCTCGTCTGGGTCTAGCGATAG
CGACAGCGACAGCGACGATGATGAGGAAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAAGAGCAAGTAAACCAGAAGGAGACTACGAAATCAGAGTCT
ACACCCACCACAACTACCTCGGACGATATCCCGCGCATTCGTGCTATACC
TAAACCGCGCATCCACCGCATCAACAAAAACCCGGACTTGCTGTCCCGGC
TATCTGCTTTCCTGCCGCAGATGAAATCTGCGAATGAGAAGCTCGAGCAG
GAGATTGCGGCGGGAAGGGGCAAGGATGTGCGATTGGAATTGGATGGGGA
TGATGATGATGATGAGGATATGGAAGGGAAGCGGTATATTGAAATGAATC
TGGGACTAGGTGTTCTAGAAGAGAAGCGGCCGGGAGATGATGACGAAGAG
GATAATGCCGAGTCAAAGGGTGACCAGAACAATCAACATGTCCTGCCTGA
GAGGCCGAAGTCTGGAAAAGACTCGAATGTGCTGGATACTCTGATGGGGA
ATGTGGATTCTTCAGTGGAGAAGGAGAAGCCGACGATCGAGGAGATATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012164KJC3_012164Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012164-T1.utr5p1KJC3_012164-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012164-T1.exon1KJC3_012164-T1.exon1Aspergillus niger KJC3exon
KJC3_012164-T1.exon2KJC3_012164-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012164-T1.cdsKJC3_012164-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012164-T1.utr3p1KJC3_012164-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012164-T1KJC3_012164-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027921
DBxrefPFAM:PF15370
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2766749..2767624 +
Powered by Drupal