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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2770243..2771556+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012166-T1 ID=KJC3_012166-T1|Name=KJC3_012166-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1314bp|location=Sequence derived from alignment at ch8:2770243..2771556+ (Aspergillus niger KJC3)
GCCGGCCTCATTCCCGGACATTGACCTCACCACATGGTTCCCTGCAGCCT
ATGATAGCGACCGTTGGAATTTAATCTCTCCCAGCTTCTTCCGTCCCCGA
TCTTGATCTCTGCCCTCGTCCAATCCATCCGAATCCCGCTCCTCGTCCGT
TGTCGGTGTCAGCGCCGCTGTCACTTTTGTGGAAATGAAGCACATGCGCC
GTCTCGTCCCTCCGACACGGACTCTTCGCCAGATCCTCCTCACTCCTCAA
CCTGCCTTTCGACCTCAGTTCTTCCAACTCAGTCTCCGAATCAATGAAGT
CCCCTCTCGTTCCTACAGCCCAACTAGTCCTCTCCTCAAATTTCGTACAA
GAGCTACTCCTCGCGCCCTGCCGCAATACGTCCTCGACGAAGAGATCGGA
GCACAATATGTCCAGATCGTGAATGAAAACAACAGCCTTGACCCTCCTGT
TAGCCTTCGGGATGCTCTGCGACAAATCGACCGTTCCAGTCAAACCTTGC
AGCAGGTGTCACCGGGTAGTGGGGATGGGGTGCCGATTTGCAAGGTTGTA
AACAAGTTCGAGCTGCGGGAAATAGCAAAGGCAAAGGCGAAACCTGCTAA
GGATGGTCTTAAGCAGCTAGAACTGAACTGGGCCATTGACGCCCATGATC
TCTCACATCGCTTAAAGCAACTCACGAATTTCCTCGAGAAGGGTCGGAAG
GTGGAGCTGATCTTGACGAGAAAAAAGCACAAGCGTTCGCCTACCGTGGA
GGAAGTGAAGAACCTCATGGACAAGGTGATGGAGACGGTGCGGGAGGCCA
AGGCGATGCCGGTCAGACCCATGGAAGGGGAGCCGGGCAAACATGTGGTG
TTGGTGGTGAAGAAAGATGTTTGAGAGGTCATATAAGCATGATGGGTTGA
TGGATTTAAGTATGTATACTATTGACGGCCTTGAGTGGTATTGGTTCTGT
ACATATAACGGACCGCTGTTTATCGTCGGTGCTTGGAAATGTTCTAGCAA
GCTTTCCAACCACTGTTGTATGGGATATATATTTTTACCCGACTGAAGGA
TGGTGTGCATCCTTATTAGCATGTTGGGCGTGGTCTGAGACAGTATTGCA
GCTCCCGTTCCGACAGTATAAGTTGGGAGCTGTCAGGTCGGGGTATGGGG
CACATGATGCTAAGCTATGGTACTACCAGTATCACGGAAGCTCGGGGACA
CGAACAGTGCATAGGCTGGATCCAATCAAAGATGTGGAAAGAAAAAGAAC
TATAGAAAAGAAGAAGCAGAACCAAATCAAAACTAGTCATTAATAACTAG
CCCTTCAGTCTCTG back to topCoding sequence (CDS) from alignment at ch8:2770243..2771556+ >KJC3_012166-T1 ID=KJC3_012166-T1|Name=KJC3_012166-T1|organism=Aspergillus niger KJC3|type=CDS|length=690bp|location=Sequence derived from alignment at ch8:2770243..2771556+ (Aspergillus niger KJC3)
ATGAAGCACATGCGCCGTCTCGTCCCTCCGACACGGACTCTTCGCCAGAT
CCTCCTCACTCCTCAACCTGCCTTTCGACCTCAGTTCTTCCAACTCAGTC
TCCGAATCAATGAAGTCCCCTCTCGTTCCTACAGCCCAACTAGTCCTCTC
CTCAAATTTCGTACAAGAGCTACTCCTCGCGCCCTGCCGCAATACGTCCT
CGACGAAGAGATCGGAGCACAATATGTCCAGATCGTGAATGAAAACAACA
GCCTTGACCCTCCTGTTAGCCTTCGGGATGCTCTGCGACAAATCGACCGT
TCCAGTCAAACCTTGCAGCAGGTGTCACCGGGTAGTGGGGATGGGGTGCC
GATTTGCAAGGTTGTAAACAAGTTCGAGCTGCGGGAAATAGCAAAGGCAA
AGGCGAAACCTGCTAAGGATGGTCTTAAGCAGCTAGAACTGAACTGGGCC
ATTGACGCCCATGATCTCTCACATCGCTTAAAGCAACTCACGAATTTCCT
CGAGAAGGGTCGGAAGGTGGAGCTGATCTTGACGAGAAAAAAGCACAAGC
GTTCGCCTACCGTGGAGGAAGTGAAGAACCTCATGGACAAGGTGATGGAG
ACGGTGCGGGAGGCCAAGGCGATGCCGGTCAGACCCATGGAAGGGGAGCC
GGGCAAACATGTGGTGTTGGTGGTGAAGAAAGATGTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006413 | translational initiation |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012166-T1.utr5p1 | KJC3_012166-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012166-T1.utr3p1 | KJC3_012166-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036788 |
| DBxref | InterPro:IPR019815 |
| DBxref | PFAM:PF00707 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2770243..2771556 + |
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