You are here

Home

KJC3_012167-T1, KJC3_012167-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012167-T1
Unique NameKJC3_012167-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2771669..2773706+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012167-T1 ID=KJC3_012167-T1|Name=KJC3_012167-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2038bp|location=Sequence derived from alignment at ch8:2771669..2773706+ (Aspergillus niger KJC3)
TAAATTTTTCCGGGCTCAACAAGAAAGCGCTGCTCGACTTCCCGGCCGTT
CAGCTCGTCCTCTTCCTGTTCCCATTCCTGTCCGGTTGTGTTTCCATCGC
AGGGTAGCCATCATGTCCAGCCTCGCCAGATCTGCCAACCTCCTTTTCCG
CTCTAGCAGGGCCTCCCTGCTGCGCCCCCGCGCTGTCAACCCCATCCAGC
ATGTCTTCCTCGGCGACAAGCTGGCTGCCCGTGGTATGGCAACCGCTTTC
GAGCGTACCAAGCCTCACGTCAACATTGGTAGGTTGCCATCATCATCTCT
TATCCATCAATGCAGTTACTCATCGCTATTTCATAGGTACCATTGGTCAC
GTCGATCACGGCAAGGTTAGACCACAATTCCTTCCCCTCTCGCTGCGTTG
ATGTTTTCCCCGATATGGTCCGAAAACTTCTCACACGTTTCCTCTAGACC
ACCTTGACCGCTGCCATCACCAAGCACCAGGCCTCCAAGGGTCTCGCTCA
GTTCCTTGAGTATGGTGCCATTGACAAGGCTCCTGAGGAGCGTAAGCGTG
GTATCACCATCTCCTCTGCCCACATCGAGTACGCTACCGATGCTCGTCAC
TACTCCCACGTCGACTGCCCCGGTCACGCCGATTACATCAAGAACATGAT
CACTGGTGCCGCCAACATGGACGGTGCTATCATTGTCGTCGCCGCTTCCG
ACGGTCAGATGTACGCTGAAACCCCAACAGAATAATCCCCTCGAGTATAT
GTGCTTACACTGGCTATCAACAGGCCCCAGACTCGTGAGCACTTGCTGCT
TGCTCGTCAGGTCGGTGTCCAGAAGATCGTTGTCTTCGTCAACAAGGTCG
ATGCCATCGATGACCCGGAGATGCTGGAGCTCGTCGAGCTGGAAATGCGC
GAGCTTCTCAGCAGCTACGGCTTCGAGGGTGAGGAGACCCCCATCGTCTT
CGGCTCTGCTCTCTGCGCCATTGAGGACCGCCGCCCCGACATCGGTGCCG
AGCGTATCGACGCTCTCCTCGAGGCCGTTGACACCTGGATCCCCACTCCC
CAGCGTGACCTTGACAAGCCTTTCTTGATGTCCATTGAGGAAGTTTTCTC
CATCCCTGGTCGTGGTACCGTCGCTTCCGGCCGTGTTGAGCGTGGTCTCC
TGAAGCGTGATAGCGAGGTTGAGATCATCGGTACGACCAACGAGGTCATC
AAGACCAAGGTCACCGACATTGAGACCTTCAAGAAGTCCTGCACTGAGTC
CCGCGCTGGTGACAACTCCGGTCTCCTTCTCCGTGGTGTCCGCCGTGAGG
ATCTCCGCCGTGGTATGGTCATTGCCGCTCCTGGCAGCGCCAAGGCCAAC
AGCAAGTTCATGGTCTCCATGTACGTCCTCACCGAGGCTGAGGGTGGTCG
CCGTACCGGTTTCGGTGTCCAGTACCGTCCCCAGCTGTTCATCCGCACTG
CCGGTAAGTGATATCGTTTTACACTCCGCTACGAGAGAACAGGTTCTGAT
TTTGTCTGCTGCAGATGAGGCTGCTGAGTTCAGCTTCCCCGACGGAGACC
AGTCCCGCCGTATCATGCCCGGTGACAACGTCGAGATGATCGTCAAGACC
CACCGCCCCGTCGCCGCCGAGGCCGGTCAGCGCTTCAACATCCGTGAGGG
TGGTCGCACTGTTGCCACTGGTCTGGTCACTCGTGTCCTGACCGAGTAAA
AAGCGAACCTACCGAGGTTTGTGTAGCAGGCCCGGAACACTGGCTGCTGT
GTACTATGGGATAAAACGAAGCGAAAACAGAATTTGGACAGGGAATCGTT
CATAATGTCTAAACACCATCTTGCAGCGCGGGCATCAGCGGGAGCATCCG
GGACTGATACGCCAGGGTGGTGGATTGCACCGGAGTTTTTGAGTTATATC
CATGTATCTGTATTTGTATTGAAATGTCTGTAGACTTTTGTATTTCTTCT
CCTCTCTTCTCACTTCTCGGTATGTCGTTGAATATGATTGAATGATCTAC
TCGAATCTCTTGACTGCAAGATAGGGTTTATAGTGTAT
back to top

Coding sequence (CDS) from alignment at ch8:2771669..2773706+

>KJC3_012167-T1 ID=KJC3_012167-T1|Name=KJC3_012167-T1|organism=Aspergillus niger KJC3|type=CDS|length=6615bp|location=Sequence derived from alignment at ch8:2771669..2773706+ (Aspergillus niger KJC3)
ATGTCCAGCCTCGCCAGATCTGCCAACCTCCTTTTCCGCTCTAGCAGGGC
CTCCCTGCTGCGCCCCCGCGCTGTCAACCCCATCCAGCATGTCTTCCTCG
GCGACAAGCTGGCTGCCCGTGGTATGGCAACCGCTTTCGAGCGTACCAAG
CCTCACGTCAACATTGGTACCATTGGTCACGTCGATCACGGCAAGACCAC
CTTGACCGCTGCCATCACCAAGCACCAGGCCTCCAAGGGTCTCGCTCAGT
TCCTTGAGTATGGTGCCATTGACAAGGCTCCTGAGGAGCGTAAGCGTGGT
ATCACCATCTCCTCTGCCCACATCGAGTACGCTACCGATGCTCGTCACTA
CTCCCACGTCGACTGCCCCGGTCACGCCGATTACATCAAGAACATGATCA
CTGGTGCCGCCAACATGGACGGTGCTATCATTGTCGTCGCCGCTTCCGAC
GGTCAGATGCCCCAGACTCGTGAGCACTTGCTGCTTGCTCGTCAGGTCGG
TGTCCAGAAGATCGTTGTCTTCGTCAACAAGGTCGATGCCATCGATGACC
CGGAGATGCTGGAGCTCGTCGAGCTGGAAATGCGCGAGCTTCTCAGCAGC
TACGGCTTCGAGGGTGAGGAGACCCCCATCGTCTTCGGCTCTGCTCTCTG
CGCCATTGAGGACCGCCGCCCCGACATCGGTGCCGAGCGTATCGACGCTC
TCCTCGAGGCCGTTGACACCTGGATCCCCACTCCCCAGCGTGACCTTGAC
AAGCCTTTCTTGATGTCCATTGAGGAAGTTTTCTCCATCCCTGGTCGTGG
TACCGTCGCTTCCGGCCGTGTTGAGCGTGGTCTCCTGAAGCGTGATAGCG
AGGTTGAGATCATCGGTACGACCAACGAGGTCATCAAGACCAAGGTCACC
GACATTGAGACCTTCAAGAAGTCCTGCACTGAGTCCCGCGCTGGTGACAA
CTCCGGTCTCCTTCTCCGTGGTGTCCGCCGTGAGGATCTCCGCCGTGGTA
TGGTCATTGCCGCTCCTGGCAGCGCCAAGGCCAACAGCAAGTTCATGGTC
TCCATGTACGTCCTCACCGAGGCTGAGGGTGGTCGCCGTACCGGTTTCGG
TGTCCAGTACCGTCCCCAGCTGTTCATCCGCACTGCCGATGAGGCTGCTG
AGTTCAGCTTCCCCGACGGAGACCAGTCCCGCCGTATCATGCCCGGTGAC
AACGTCGAGATGATCGTCAAGACCCACCGCCCCGTCGCCGCCGAGGCCGG
TCAGCGCTTCAACATCCGTGAGGGTGGTCGCACTGTTGCCACTGGTCTGG
TCACTCGTGTCCTGACCGAGTAAATGTCCAGCCTCGCCAGATCTGCCAAC
CTCCTTTTCCGCTCTAGCAGGGCCTCCCTGCTGCGCCCCCGCGCTGTCAA
CCCCATCCAGCATGTCTTCCTCGGCGACAAGCTGGCTGCCCGTGGTATGG
CAACCGCTTTCGAGCGTACCAAGCCTCACGTCAACATTGGTACCATTGGT
CACGTCGATCACGGCAAGACCACCTTGACCGCTGCCATCACCAAGCACCA
GGCCTCCAAGGGTCTCGCTCAGTTCCTTGAGTATGGTGCCATTGACAAGG
CTCCTGAGGAGCGTAAGCGTGGTATCACCATCTCCTCTGCCCACATCGAG
TACGCTACCGATGCTCGTCACTACTCCCACGTCGACTGCCCCGGTCACGC
CGATTACATCAAGAACATGATCACTGGTGCCGCCAACATGGACGGTGCTA
TCATTGTCGTCGCCGCTTCCGACGGTCAGATGCCCCAGACTCGTGAGCAC
TTGCTGCTTGCTCGTCAGGTCGGTGTCCAGAAGATCGTTGTCTTCGTCAA
CAAGGTCGATGCCATCGATGACCCGGAGATGCTGGAGCTCGTCGAGCTGG
AAATGCGCGAGCTTCTCAGCAGCTACGGCTTCGAGGGTGAGGAGACCCCC
ATCGTCTTCGGCTCTGCTCTCTGCGCCATTGAGGACCGCCGCCCCGACAT
CGGTGCCGAGCGTATCGACGCTCTCCTCGAGGCCGTTGACACCTGGATCC
CCACTCCCCAGCGTGACCTTGACAAGCCTTTCTTGATGTCCATTGAGGAA
GTTTTCTCCATCCCTGGTCGTGGTACCGTCGCTTCCGGCCGTGTTGAGCG
TGGTCTCCTGAAGCGTGATAGCGAGGTTGAGATCATCGGTACGACCAACG
AGGTCATCAAGACCAAGGTCACCGACATTGAGACCTTCAAGAAGTCCTGC
ACTGAGTCCCGCGCTGGTGACAACTCCGGTCTCCTTCTCCGTGGTGTCCG
CCGTGAGGATCTCCGCCGTGGTATGGTCATTGCCGCTCCTGGCAGCGCCA
AGGCCAACAGCAAGTTCATGGTCTCCATGTACGTCCTCACCGAGGCTGAG
GGTGGTCGCCGTACCGGTTTCGGTGTCCAGTACCGTCCCCAGCTGTTCAT
CCGCACTGCCGATGAGGCTGCTGAGTTCAGCTTCCCCGACGGAGACCAGT
CCCGCCGTATCATGCCCGGTGACAACGTCGAGATGATCGTCAAGACCCAC
CGCCCCGTCGCCGCCGAGGCCGGTCAGCGCTTCAACATCCGTGAGGGTGG
TCGCACTGTTGCCACTGGTCTGGTCACTCGTGTCCTGACCGAGTAAATGT
CCAGCCTCGCCAGATCTGCCAACCTCCTTTTCCGCTCTAGCAGGGCCTCC
CTGCTGCGCCCCCGCGCTGTCAACCCCATCCAGCATGTCTTCCTCGGCGA
CAAGCTGGCTGCCCGTGGTATGGCAACCGCTTTCGAGCGTACCAAGCCTC
ACGTCAACATTGGTACCATTGGTCACGTCGATCACGGCAAGACCACCTTG
ACCGCTGCCATCACCAAGCACCAGGCCTCCAAGGGTCTCGCTCAGTTCCT
TGAGTATGGTGCCATTGACAAGGCTCCTGAGGAGCGTAAGCGTGGTATCA
CCATCTCCTCTGCCCACATCGAGTACGCTACCGATGCTCGTCACTACTCC
CACGTCGACTGCCCCGGTCACGCCGATTACATCAAGAACATGATCACTGG
TGCCGCCAACATGGACGGTGCTATCATTGTCGTCGCCGCTTCCGACGGTC
AGATGCCCCAGACTCGTGAGCACTTGCTGCTTGCTCGTCAGGTCGGTGTC
CAGAAGATCGTTGTCTTCGTCAACAAGGTCGATGCCATCGATGACCCGGA
GATGCTGGAGCTCGTCGAGCTGGAAATGCGCGAGCTTCTCAGCAGCTACG
GCTTCGAGGGTGAGGAGACCCCCATCGTCTTCGGCTCTGCTCTCTGCGCC
ATTGAGGACCGCCGCCCCGACATCGGTGCCGAGCGTATCGACGCTCTCCT
CGAGGCCGTTGACACCTGGATCCCCACTCCCCAGCGTGACCTTGACAAGC
CTTTCTTGATGTCCATTGAGGAAGTTTTCTCCATCCCTGGTCGTGGTACC
GTCGCTTCCGGCCGTGTTGAGCGTGGTCTCCTGAAGCGTGATAGCGAGGT
TGAGATCATCGGTACGACCAACGAGGTCATCAAGACCAAGGTCACCGACA
TTGAGACCTTCAAGAAGTCCTGCACTGAGTCCCGCGCTGGTGACAACTCC
GGTCTCCTTCTCCGTGGTGTCCGCCGTGAGGATCTCCGCCGTGGTATGGT
CATTGCCGCTCCTGGCAGCGCCAAGGCCAACAGCAAGTTCATGGTCTCCA
TGTACGTCCTCACCGAGGCTGAGGGTGGTCGCCGTACCGGTTTCGGTGTC
CAGTACCGTCCCCAGCTGTTCATCCGCACTGCCGATGAGGCTGCTGAGTT
CAGCTTCCCCGACGGAGACCAGTCCCGCCGTATCATGCCCGGTGACAACG
TCGAGATGATCGTCAAGACCCACCGCCCCGTCGCCGCCGAGGCCGGTCAG
CGCTTCAACATCCGTGAGGGTGGTCGCACTGTTGCCACTGGTCTGGTCAC
TCGTGTCCTGACCGAGTAAATGTCCAGCCTCGCCAGATCTGCCAACCTCC
TTTTCCGCTCTAGCAGGGCCTCCCTGCTGCGCCCCCGCGCTGTCAACCCC
ATCCAGCATGTCTTCCTCGGCGACAAGCTGGCTGCCCGTGGTATGGCAAC
CGCTTTCGAGCGTACCAAGCCTCACGTCAACATTGGTACCATTGGTCACG
TCGATCACGGCAAGACCACCTTGACCGCTGCCATCACCAAGCACCAGGCC
TCCAAGGGTCTCGCTCAGTTCCTTGAGTATGGTGCCATTGACAAGGCTCC
TGAGGAGCGTAAGCGTGGTATCACCATCTCCTCTGCCCACATCGAGTACG
CTACCGATGCTCGTCACTACTCCCACGTCGACTGCCCCGGTCACGCCGAT
TACATCAAGAACATGATCACTGGTGCCGCCAACATGGACGGTGCTATCAT
TGTCGTCGCCGCTTCCGACGGTCAGATGCCCCAGACTCGTGAGCACTTGC
TGCTTGCTCGTCAGGTCGGTGTCCAGAAGATCGTTGTCTTCGTCAACAAG
GTCGATGCCATCGATGACCCGGAGATGCTGGAGCTCGTCGAGCTGGAAAT
GCGCGAGCTTCTCAGCAGCTACGGCTTCGAGGGTGAGGAGACCCCCATCG
TCTTCGGCTCTGCTCTCTGCGCCATTGAGGACCGCCGCCCCGACATCGGT
GCCGAGCGTATCGACGCTCTCCTCGAGGCCGTTGACACCTGGATCCCCAC
TCCCCAGCGTGACCTTGACAAGCCTTTCTTGATGTCCATTGAGGAAGTTT
TCTCCATCCCTGGTCGTGGTACCGTCGCTTCCGGCCGTGTTGAGCGTGGT
CTCCTGAAGCGTGATAGCGAGGTTGAGATCATCGGTACGACCAACGAGGT
CATCAAGACCAAGGTCACCGACATTGAGACCTTCAAGAAGTCCTGCACTG
AGTCCCGCGCTGGTGACAACTCCGGTCTCCTTCTCCGTGGTGTCCGCCGT
GAGGATCTCCGCCGTGGTATGGTCATTGCCGCTCCTGGCAGCGCCAAGGC
CAACAGCAAGTTCATGGTCTCCATGTACGTCCTCACCGAGGCTGAGGGTG
GTCGCCGTACCGGTTTCGGTGTCCAGTACCGTCCCCAGCTGTTCATCCGC
ACTGCCGATGAGGCTGCTGAGTTCAGCTTCCCCGACGGAGACCAGTCCCG
CCGTATCATGCCCGGTGACAACGTCGAGATGATCGTCAAGACCCACCGCC
CCGTCGCCGCCGAGGCCGGTCAGCGCTTCAACATCCGTGAGGGTGGTCGC
ACTGTTGCCACTGGTCTGGTCACTCGTGTCCTGACCGAGTAAATGTCCAG
CCTCGCCAGATCTGCCAACCTCCTTTTCCGCTCTAGCAGGGCCTCCCTGC
TGCGCCCCCGCGCTGTCAACCCCATCCAGCATGTCTTCCTCGGCGACAAG
CTGGCTGCCCGTGGTATGGCAACCGCTTTCGAGCGTACCAAGCCTCACGT
CAACATTGGTACCATTGGTCACGTCGATCACGGCAAGACCACCTTGACCG
CTGCCATCACCAAGCACCAGGCCTCCAAGGGTCTCGCTCAGTTCCTTGAG
TATGGTGCCATTGACAAGGCTCCTGAGGAGCGTAAGCGTGGTATCACCAT
CTCCTCTGCCCACATCGAGTACGCTACCGATGCTCGTCACTACTCCCACG
TCGACTGCCCCGGTCACGCCGATTACATCAAGAACATGATCACTGGTGCC
GCCAACATGGACGGTGCTATCATTGTCGTCGCCGCTTCCGACGGTCAGAT
GCCCCAGACTCGTGAGCACTTGCTGCTTGCTCGTCAGGTCGGTGTCCAGA
AGATCGTTGTCTTCGTCAACAAGGTCGATGCCATCGATGACCCGGAGATG
CTGGAGCTCGTCGAGCTGGAAATGCGCGAGCTTCTCAGCAGCTACGGCTT
CGAGGGTGAGGAGACCCCCATCGTCTTCGGCTCTGCTCTCTGCGCCATTG
AGGACCGCCGCCCCGACATCGGTGCCGAGCGTATCGACGCTCTCCTCGAG
GCCGTTGACACCTGGATCCCCACTCCCCAGCGTGACCTTGACAAGCCTTT
CTTGATGTCCATTGAGGAAGTTTTCTCCATCCCTGGTCGTGGTACCGTCG
CTTCCGGCCGTGTTGAGCGTGGTCTCCTGAAGCGTGATAGCGAGGTTGAG
ATCATCGGTACGACCAACGAGGTCATCAAGACCAAGGTCACCGACATTGA
GACCTTCAAGAAGTCCTGCACTGAGTCCCGCGCTGGTGACAACTCCGGTC
TCCTTCTCCGTGGTGTCCGCCGTGAGGATCTCCGCCGTGGTATGGTCATT
GCCGCTCCTGGCAGCGCCAAGGCCAACAGCAAGTTCATGGTCTCCATGTA
CGTCCTCACCGAGGCTGAGGGTGGTCGCCGTACCGGTTTCGGTGTCCAGT
ACCGTCCCCAGCTGTTCATCCGCACTGCCGATGAGGCTGCTGAGTTCAGC
TTCCCCGACGGAGACCAGTCCCGCCGTATCATGCCCGGTGACAACGTCGA
GATGATCGTCAAGACCCACCGCCCCGTCGCCGCCGAGGCCGGTCAGCGCT
TCAACATCCGTGAGGGTGGTCGCACTGTTGCCACTGGTCTGGTCACTCGT
GTCCTGACCGAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TUF1KJC3_012167Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012167-T1KJC3_012167-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012167-T1.utr5p1KJC3_012167-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012167-T1.exon1KJC3_012167-T1.exon1Aspergillus niger KJC3exon
KJC3_012167-T1.exon2KJC3_012167-T1.exon2Aspergillus niger KJC3exon
KJC3_012167-T1.exon3KJC3_012167-T1.exon3Aspergillus niger KJC3exon
KJC3_012167-T1.exon4KJC3_012167-T1.exon4Aspergillus niger KJC3exon
KJC3_012167-T1.exon5KJC3_012167-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012167-T1.cdsKJC3_012167-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012167-T1.utr3p1KJC3_012167-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR009001
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR033720
DBxrefInterPro:IPR041709
DBxrefInterPro:IPR031157
DBxrefInterPro:IPR004541
DBxrefInterPro:IPR004161
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR004160
DBxrefInterPro:IPR000795
DBxrefPFAM:PF01926
DBxrefPFAM:PF03143
DBxrefPFAM:PF03144
DBxrefPFAM:PF00009
Producttranslation elongation factor Tu
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2771669..2773706 +
Powered by Drupal