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KJC3_012173-T1, KJC3_012173-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012173-T1
Unique NameKJC3_012173-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2789027..2789996+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012173-T1 ID=KJC3_012173-T1|Name=KJC3_012173-T1|organism=Aspergillus niger KJC3|type=mRNA|length=970bp|location=Sequence derived from alignment at ch8:2789027..2789996+ (Aspergillus niger KJC3)
ATACAATTCCACTTAATATATCTACTCAACCACCATGGCAACCCCCCAAG
AACGCCACCCCGAACTCTTCCGTCCCGTGAACAGCGACTCCCCACGAGGC
AAGAAGCGCACCGTTCCACTCGAAGTCCTCTGCCTGGGGTTCAACCGAAC
AGGAACAGCCTGTAAGTATGACCTCGAGTATCCTCCATATCATCCCACTA
CACAATTGTCAAAAGCGAACCAACCCATACTAAAAGCAAAGATAGCAATG
TGTTCCGCCCTCGAAACCCTCTCCCTCCCCTGCTGGCACTCCATCACCCT
CATGTCCGACAAATTCGGCACCATCCCCATGTGGCAAGAAGCCATCGACC
GGAAATTCTTCAACGCGCCGGGCCCCCAATACGGCCGAGCTGAGTTCGAC
CAACTCCTACACGACTTCGCCGCTATCTCCTCCGACACTCCGGCCATCGC
CTTCTCCGAGGAGTTGATCCGTGCGTACCCCGAAGCTAAAGTGGTGTTGG
TGGAGCGGGACATCGACTCGTGGTACGAGAGCTGGATGAACGGCGTGATT
GCCAACACGTATGATCCTATCGTGACAATCATATATACAATTGATCGGTG
GTTCACGCACCCTTTGGGCAAGGTGCATAAGTCGACCTTTGAGGGGTGGT
TGGGGATTAAGGGTCCGGAGGATGCGAAACGTGTGAGTCGGGAGAAGTAT
AGGGAGCATTATGCGTTGGTGAGACGGCTGACGCCGCCGGAGAGGCTGTT
GGAGTTTAAGTTGAGTGAGGGGTGGGGGCCGTTGTGTGAGTTTCTGGGCA
AGCCGGTGCCCGATGTGCCATTCCCGCATTTAAATGAGAAGAAGTGGTTG
GATGAGAAGGTGAGGATTGTGATGTGGAGGGGGATGATGAGGTTGGGGTG
GAGGGTTGGGTTGTGGGTGTTGGGGCCTGTGGTGGTGGCGGCGTTGGTCT
ATAGGGTTATGGGGATGTAG
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Coding sequence (CDS) from alignment at ch8:2789027..2789996+

>KJC3_012173-T1 ID=KJC3_012173-T1|Name=KJC3_012173-T1|organism=Aspergillus niger KJC3|type=CDS|length=1704bp|location=Sequence derived from alignment at ch8:2789027..2789996+ (Aspergillus niger KJC3)
ATGGCAACCCCCCAAGAACGCCACCCCGAACTCTTCCGTCCCGTGAACAG
CGACTCCCCACGAGGCAAGAAGCGCACCGTTCCACTCGAAGTCCTCTGCC
TGGGGTTCAACCGAACAGGAACAGCCTCAATGTGTTCCGCCCTCGAAACC
CTCTCCCTCCCCTGCTGGCACTCCATCACCCTCATGTCCGACAAATTCGG
CACCATCCCCATGTGGCAAGAAGCCATCGACCGGAAATTCTTCAACGCGC
CGGGCCCCCAATACGGCCGAGCTGAGTTCGACCAACTCCTACACGACTTC
GCCGCTATCTCCTCCGACACTCCGGCCATCGCCTTCTCCGAGGAGTTGAT
CCGTGCGTACCCCGAAGCTAAAGTGGTGTTGGTGGAGCGGGACATCGACT
CGTGGTACGAGAGCTGGATGAACGGCGTGATTGCCAACACGTATGATCCT
ATCGTGACAATCATATATACAATTGATCGGTGGTTCACGCACCCTTTGGG
CAAGGTGCATAAGTCGACCTTTGAGGGGTGGTTGGGGATTAAGGGTCCGG
AGGATGCGAAACGTGTGAGTCGGGAGAAGTATAGGGAGCATTATGCGTTG
GTGAGACGGCTGACGCCGCCGGAGAGGCTGTTGGAGTTTAAGTTGAGTGA
GGGGTGGGGGCCGTTGTGTGAGTTTCTGGGCAAGCCGGTGCCCGATGTGC
CATTCCCGCATTTAAATGAGAAGAAGTGGTTGGATGAGAAGGTGAGGATT
GTGATGTGGAGGGGGATGATGAGGTTGGGGTGGAGGGTTGGGTTGTGGGT
GTTGGGGCCTGTGGTGGTGGCGGCGTTGGTCTATAGGGTTATGGGGATGT
AGATGGCAACCCCCCAAGAACGCCACCCCGAACTCTTCCGTCCCGTGAAC
AGCGACTCCCCACGAGGCAAGAAGCGCACCGTTCCACTCGAAGTCCTCTG
CCTGGGGTTCAACCGAACAGGAACAGCCTCAATGTGTTCCGCCCTCGAAA
CCCTCTCCCTCCCCTGCTGGCACTCCATCACCCTCATGTCCGACAAATTC
GGCACCATCCCCATGTGGCAAGAAGCCATCGACCGGAAATTCTTCAACGC
GCCGGGCCCCCAATACGGCCGAGCTGAGTTCGACCAACTCCTACACGACT
TCGCCGCTATCTCCTCCGACACTCCGGCCATCGCCTTCTCCGAGGAGTTG
ATCCGTGCGTACCCCGAAGCTAAAGTGGTGTTGGTGGAGCGGGACATCGA
CTCGTGGTACGAGAGCTGGATGAACGGCGTGATTGCCAACACGTATGATC
CTATCGTGACAATCATATATACAATTGATCGGTGGTTCACGCACCCTTTG
GGCAAGGTGCATAAGTCGACCTTTGAGGGGTGGTTGGGGATTAAGGGTCC
GGAGGATGCGAAACGTGTGAGTCGGGAGAAGTATAGGGAGCATTATGCGT
TGGTGAGACGGCTGACGCCGCCGGAGAGGCTGTTGGAGTTTAAGTTGAGT
GAGGGGTGGGGGCCGTTGTGTGAGTTTCTGGGCAAGCCGGTGCCCGATGT
GCCATTCCCGCATTTAAATGAGAAGAAGTGGTTGGATGAGAAGGTGAGGA
TTGTGATGTGGAGGGGGATGATGAGGTTGGGGTGGAGGGTTGGGTTGTGG
GTGTTGGGGCCTGTGGTGGTGGCGGCGTTGGTCTATAGGGTTATGGGGAT
GTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012173KJC3_012173Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012173-T1.utr5p1KJC3_012173-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012173-T1.exon1KJC3_012173-T1.exon1Aspergillus niger KJC3exon
KJC3_012173-T1.exon2KJC3_012173-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012173-T1.cdsKJC3_012173-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012173-T1KJC3_012173-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR040632
DBxrefPFAM:PF17784
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2789027..2789996 +
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