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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2851187..2852636+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012197-T1 ID=KJC3_012197-T1|Name=KJC3_012197-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1450bp|location=Sequence derived from alignment at ch8:2851187..2852636+ (Aspergillus niger KJC3)
ATTCCCCATGTCTCTGGACATCCGAGGGTCCAGATCGGATGTAGTATCGC
GATCCTTGTCCATCCATAGTGTAGGTATTAATAATATAACACTTCATCCA
AGGAATACGAAGTCATTTGATCACTTATTTGTGAGCAGCCTCATCCGTCC
CGAACCCAAAGCTCCCGAGAGTCCAACAGTTCTGAGATATAAACCTACTA
AACAGGCCTCCCTTAGATATACCAACATATCAACAAACAACCCAAATCTA
ACTTACTACATTTCACCACATCGCCAAAATGACCGAACTAAGAATCACCA
AAATCGACGTCTTTCAAGTCGACCTCCCCTACTCTCACGGCACATACCAC
CTCTCCGGCGGCCGGGCAATCACCCGCTTCGACGCCACTTTCGTCCGCGT
CACCACCAACACCGGCCTCGAAGGCTGGGGCGAAAGCACCCCCTTCGACA
ACTACATTGCATCGCATGCCGGCGGAGTCAGAGCCGCTATCGCAGAGATC
GCCCCCAAGCTCGTCGGCCTCGACCCCCGCCGAGTCGATCGCCTCAACGA
TGCCATGGACGCCGCCTTACTAGGCAACGAGCCAGCAAAATCCGCCATCG
ATATTGCCTGCTGGGATATCTTCGGCAAGTCTGTTGGACTTCCCGTGTGT
GAGTTGCTCGGCGGACGGACAGAAACGAAGCTCCCTGTTCTGGAGTCGAT
CCCCGTTGCGGATCCTGAGGGGACGCGCAAGCATGTTGCTGATGCAAGGG
CGTTGGGGTTTACGGGGTTCTCGGTGAAGATTGGCTCGGACCCCGTGGCT
AATGCTGCACGGGTGGAAGCTGCTCTGGTGGATAAGAGACCAGGGGAGTT
CTTTTTGATCGATGCTAATGGTGGCATGACTGTTGATACTGCGCTTCGGA
TGTTCAGGTTACTTCCTAAAGGGCTGGACTTTGTCCTGGAAGCGCCCTGT
GCTACGTATAGGGAGAGCATGTCGCTTCGACGACGGATTGATGTGCCGAT
TATCTTTGATGAGTTGGCGAACAATGAGAGCTCGATTGTGCAGTTCGTTG
CGGATGATGCTGTTGATGGGATCGGGTTGAAGATTTCCAAGACGGGTGGG
TTGACGCGAGGACGCAGGGTTAGGGATATTTGTCTTGCGGCGGGGTATAC
CATGTCTGTTCAGGATACGAGTGGTTCGGACGTGGCGTTTGCGGCGATTG
TGCATCTCGGACAGACTATTCCGGAGCAGTATTTGAGGTGTATCTTGGAG
TGCAGGGCTATGTGTGTTGGGAAGACGGCGGATGGGCCGTTTGATGTGCA
TGAGGGGGTCCTGACGGCACCGACTTGTCCGGGGTTGGGGGTTAGGCCGA
GGATGGATGTGTTGGGAGAGCCGGTTGCTAGTTATGATTGAGGTTACTCA
GCTGCTGTCATGTGGGCAGATGGTGTATTTTTCTTTCAAGTTATTTAGTA
back to topCoding sequence (CDS) from alignment at ch8:2851187..2852636+ >KJC3_012197-T1 ID=KJC3_012197-T1|Name=KJC3_012197-T1|organism=Aspergillus niger KJC3|type=CDS|length=1113bp|location=Sequence derived from alignment at ch8:2851187..2852636+ (Aspergillus niger KJC3)
ATGACCGAACTAAGAATCACCAAAATCGACGTCTTTCAAGTCGACCTCCC
CTACTCTCACGGCACATACCACCTCTCCGGCGGCCGGGCAATCACCCGCT
TCGACGCCACTTTCGTCCGCGTCACCACCAACACCGGCCTCGAAGGCTGG
GGCGAAAGCACCCCCTTCGACAACTACATTGCATCGCATGCCGGCGGAGT
CAGAGCCGCTATCGCAGAGATCGCCCCCAAGCTCGTCGGCCTCGACCCCC
GCCGAGTCGATCGCCTCAACGATGCCATGGACGCCGCCTTACTAGGCAAC
GAGCCAGCAAAATCCGCCATCGATATTGCCTGCTGGGATATCTTCGGCAA
GTCTGTTGGACTTCCCGTGTGTGAGTTGCTCGGCGGACGGACAGAAACGA
AGCTCCCTGTTCTGGAGTCGATCCCCGTTGCGGATCCTGAGGGGACGCGC
AAGCATGTTGCTGATGCAAGGGCGTTGGGGTTTACGGGGTTCTCGGTGAA
GATTGGCTCGGACCCCGTGGCTAATGCTGCACGGGTGGAAGCTGCTCTGG
TGGATAAGAGACCAGGGGAGTTCTTTTTGATCGATGCTAATGGTGGCATG
ACTGTTGATACTGCGCTTCGGATGTTCAGGTTACTTCCTAAAGGGCTGGA
CTTTGTCCTGGAAGCGCCCTGTGCTACGTATAGGGAGAGCATGTCGCTTC
GACGACGGATTGATGTGCCGATTATCTTTGATGAGTTGGCGAACAATGAG
AGCTCGATTGTGCAGTTCGTTGCGGATGATGCTGTTGATGGGATCGGGTT
GAAGATTTCCAAGACGGGTGGGTTGACGCGAGGACGCAGGGTTAGGGATA
TTTGTCTTGCGGCGGGGTATACCATGTCTGTTCAGGATACGAGTGGTTCG
GACGTGGCGTTTGCGGCGATTGTGCATCTCGGACAGACTATTCCGGAGCA
GTATTTGAGGTGTATCTTGGAGTGCAGGGCTATGTGTGTTGGGAAGACGG
CGGATGGGCCGTTTGATGTGCATGAGGGGGTCCTGACGGCACCGACTTGT
CCGGGGTTGGGGGTTAGGCCGAGGATGGATGTGTTGGGAGAGCCGGTTGC
TAGTTATGATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012197-T1.utr5p1 | KJC3_012197-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012197-T1.utr3p1 | KJC3_012197-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.6 |
| Note | SMCOG1268:mandelate racemase/muconate lactonizing enzyme |
| DBxref | InterPro:IPR029065 |
| DBxref | InterPro:IPR013341 |
| DBxref | InterPro:IPR036849 |
| DBxref | InterPro:IPR029017 |
| DBxref | InterPro:IPR013342 |
| DBxref | PFAM:PF02746 |
| DBxref | PFAM:PF13378 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2851187..2852636 + |
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