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KJC3_012209-T1, KJC3_012209-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012209-T1
Unique NameKJC3_012209-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2877988..2879328+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012209-T1 ID=KJC3_012209-T1|Name=KJC3_012209-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1341bp|location=Sequence derived from alignment at ch8:2877988..2879328+ (Aspergillus niger KJC3)
CCTTTCCACTCGGACCCGGCGAACCATCTCCATCAATTCGATCCCCCTCT
CCTCGACTTTTCCACCCCCGATCCGGTCCATTGAGTCCTACGCCCAGCCG
TCACCATGGCGTCCAGAGAGCCCCAGTACGTTGATACCTTGCCAATCCCC
CCAATCGACCACTTCCACGGGTTACCCTTGACTACTACACCACCACATAT
AATACGACACATATACATACATGCATGCAACACAATTGGATTAGAACAAC
TCGTTTCTAACGGAATATGACTGCTTCAGGTTTAACCAGCAGGTGCTGGT
CGACACGACCCCCATGCCCGATCACATCCCCAAGGTGGAGGAGATCGGTG
CTACGTCGGCGCCGCTGTACAGCGCGGCGTACTTTATCGGAGACCGCTGC
AAGCCCTACAACGACGACTTCATGAAGTGCAAGGACGAGTCGAACGGGCG
CGGAGAGCTGGACTGTCTGAAGGAGGGTAGAAAGGTGACGCGCTGTGCGG
CTAGCGTGTATGTTGTCCCCATGCTCTATATTCAATTCGCCCATTGAGTG
ATGAGAATCACCGGAGAAATGGATACTGATTACAATGGGGATCCCTGCAG
AATCAAGGACATCAACACCCACTGCCTGAAGTCGTTCACCGCTCACTGGG
AGTGCCTCGAGAACAACAACCACAAGCTCTGGGAGTGCCGTGCGCAGGAG
ATGAAGCTGAACAGCTGTGTTTTCGAGAAGCTGGTTCGTGATACCTTCTT
AATAGATATCCTGTTTCGGATCCTTGTTGGCGTACCACAGAGAAATACTA
ATCCGGTTGTATAGGGCCTGAAGAAGGAAATCCCCGGAACCCCCGAGAAT
GTCGTCCCCGTGCACTTGCGCCCCAAGCAGCTCTACTCGGACTGGCCTGG
TCGGCAATATTAAAATTACAAAATGAAATCTTGAGGGGAGCATATATCAT
TGTGTTTTTCTTAACTGAACTACTAACTTAACGTGTCTTTTGTATTCCGG
TGTTTTCCTTTTGTTCTTCCGTCTCTCTGGTTGACGTCTGTTTGTGTATA
TATTAGCATCAGGAATGTCATTGGTTCCGCGAGTCAGTCACTTGGATTCA
AGTAAGAATATTGCTTTTGAGTTACTATAAATATAGATTCAATTGGTATC
AGATGATGACGATGATGCATACACTATAATCCAGGCTCCAGATCTATGGA
CTGAAGTATGAAACTACCTAGAATACAAAAGTATACAACCAGAACACCGC
AGAAATATGCAGACAGCTAACCACTGCAATGAGATATCAAGCTCCGCAAA
GAAGTGGACAGCCTCTAAAAATGGACCTGACACAACAAAAG
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Coding sequence (CDS) from alignment at ch8:2877988..2879328+

>KJC3_012209-T1 ID=KJC3_012209-T1|Name=KJC3_012209-T1|organism=Aspergillus niger KJC3|type=CDS|length=1920bp|location=Sequence derived from alignment at ch8:2877988..2879328+ (Aspergillus niger KJC3)
ATGGCGTCCAGAGAGCCCCAGTTTAACCAGCAGGTGCTGGTCGACACGAC
CCCCATGCCCGATCACATCCCCAAGGTGGAGGAGATCGGTGCTACGTCGG
CGCCGCTGTACAGCGCGGCGTACTTTATCGGAGACCGCTGCAAGCCCTAC
AACGACGACTTCATGAAGTGCAAGGACGAGTCGAACGGGCGCGGAGAGCT
GGACTGTCTGAAGGAGGGTAGAAAGGTGACGCGCTGTGCGGCTAGCGTAA
TCAAGGACATCAACACCCACTGCCTGAAGTCGTTCACCGCTCACTGGGAG
TGCCTCGAGAACAACAACCACAAGCTCTGGGAGTGCCGTGCGCAGGAGAT
GAAGCTGAACAGCTGTGTTTTCGAGAAGCTGGGCCTGAAGAAGGAAATCC
CCGGAACCCCCGAGAATGTCGTCCCCGTGCACTTGCGCCCCAAGCAGCTC
TACTCGGACTGGCCTGGTCGGCAATATTAAATGGCGTCCAGAGAGCCCCA
GTTTAACCAGCAGGTGCTGGTCGACACGACCCCCATGCCCGATCACATCC
CCAAGGTGGAGGAGATCGGTGCTACGTCGGCGCCGCTGTACAGCGCGGCG
TACTTTATCGGAGACCGCTGCAAGCCCTACAACGACGACTTCATGAAGTG
CAAGGACGAGTCGAACGGGCGCGGAGAGCTGGACTGTCTGAAGGAGGGTA
GAAAGGTGACGCGCTGTGCGGCTAGCGTAATCAAGGACATCAACACCCAC
TGCCTGAAGTCGTTCACCGCTCACTGGGAGTGCCTCGAGAACAACAACCA
CAAGCTCTGGGAGTGCCGTGCGCAGGAGATGAAGCTGAACAGCTGTGTTT
TCGAGAAGCTGGGCCTGAAGAAGGAAATCCCCGGAACCCCCGAGAATGTC
GTCCCCGTGCACTTGCGCCCCAAGCAGCTCTACTCGGACTGGCCTGGTCG
GCAATATTAAATGGCGTCCAGAGAGCCCCAGTTTAACCAGCAGGTGCTGG
TCGACACGACCCCCATGCCCGATCACATCCCCAAGGTGGAGGAGATCGGT
GCTACGTCGGCGCCGCTGTACAGCGCGGCGTACTTTATCGGAGACCGCTG
CAAGCCCTACAACGACGACTTCATGAAGTGCAAGGACGAGTCGAACGGGC
GCGGAGAGCTGGACTGTCTGAAGGAGGGTAGAAAGGTGACGCGCTGTGCG
GCTAGCGTAATCAAGGACATCAACACCCACTGCCTGAAGTCGTTCACCGC
TCACTGGGAGTGCCTCGAGAACAACAACCACAAGCTCTGGGAGTGCCGTG
CGCAGGAGATGAAGCTGAACAGCTGTGTTTTCGAGAAGCTGGGCCTGAAG
AAGGAAATCCCCGGAACCCCCGAGAATGTCGTCCCCGTGCACTTGCGCCC
CAAGCAGCTCTACTCGGACTGGCCTGGTCGGCAATATTAAATGGCGTCCA
GAGAGCCCCAGTTTAACCAGCAGGTGCTGGTCGACACGACCCCCATGCCC
GATCACATCCCCAAGGTGGAGGAGATCGGTGCTACGTCGGCGCCGCTGTA
CAGCGCGGCGTACTTTATCGGAGACCGCTGCAAGCCCTACAACGACGACT
TCATGAAGTGCAAGGACGAGTCGAACGGGCGCGGAGAGCTGGACTGTCTG
AAGGAGGGTAGAAAGGTGACGCGCTGTGCGGCTAGCGTAATCAAGGACAT
CAACACCCACTGCCTGAAGTCGTTCACCGCTCACTGGGAGTGCCTCGAGA
ACAACAACCACAAGCTCTGGGAGTGCCGTGCGCAGGAGATGAAGCTGAAC
AGCTGTGTTTTCGAGAAGCTGGGCCTGAAGAAGGAAATCCCCGGAACCCC
CGAGAATGTCGTCCCCGTGCACTTGCGCCCCAAGCAGCTCTACTCGGACT
GGCCTGGTCGGCAATATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006120mitochondrial electron transport, NADH to ubiquinone
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012209KJC3_012209Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012209-T1KJC3_012209-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012209-T1.utr5p1KJC3_012209-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012209-T1.exon1KJC3_012209-T1.exon1Aspergillus niger KJC3exon
KJC3_012209-T1.exon2KJC3_012209-T1.exon2Aspergillus niger KJC3exon
KJC3_012209-T1.exon3KJC3_012209-T1.exon3Aspergillus niger KJC3exon
KJC3_012209-T1.exon4KJC3_012209-T1.exon4Aspergillus niger KJC3exon
KJC3_012209-T1.exon5KJC3_012209-T1.exon5Aspergillus niger KJC3exon
KJC3_012209-T1.exon6KJC3_012209-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012209-T1.cdsKJC3_012209-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012209-T1.utr3p1KJC3_012209-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_012209-T1.utr3p2KJC3_012209-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_012209-T1.utr3p3KJC3_012209-T1.utr3p3Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016680
DBxrefInterPro:IPR010625
DBxrefPFAM:PF06747
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2877988..2879328 +
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