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KJC3_012231-T2, KJC3_012231-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012231-T2
Unique NameKJC3_012231-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2959981..2961018+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012231-T2 ID=KJC3_012231-T2|Name=KJC3_012231-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1038bp|location=Sequence derived from alignment at ch8:2959981..2961018+ (Aspergillus niger KJC3)
GCTCGGTGTTTTGTCACATCATGAATACTCCCTCACGAATCCTGCATAGC
CGAATAGGCCGCTTGAGGGAAAAGTGAAGCTGGGTTGGAACAGGTGCTTG
GGTTCTTATTTTACCAGTTAGGTATATACTTGGAAAGTCCCAAAACATGT
GGCATGCTGCTACAACAGACGACAACCACCGTAGTAGGTACCAATCAGAC
ATGCATCTGCTGTTGTTGCCTAGCCGGCTTTCAAGCGCAGGCGGTCAATA
TCAACCCCTCAGAAGCAATATTGAATATCGCCCAAGTACTTAGCAGACTG
GTCTCAACACCCTGGTTTACTATAGACCGTTCCAACCGAAGGTTGTTGCT
CTTCTACTCCATCGTATACTACCGTTATGCCTCCCAGAGCAATATTCCTC
GTATCATCCCAAAATAGCCCGAGCCAGCGTGCCCATTTCTCAATCTTCGT
TCCGTCAGTCGCTTGTTCCACTATAGGTACTTCGATACACGTTATGGGTG
CGCCTATGATGGGCTATCAACTCGAGTTCAAACGGAATCACTCCCTATCT
TCAAACGCAGAGCCATATGAGACGGCATTGCTTGGATATGTCGACTCTCA
CCATATTGCAGACTCTCCAGGAGAGAGGAGTATGTTCGTAGACCATGCCC
CGAGGGATGATCTTGAAATCGCAGCCAGTCAGATACCGGCCCCCCGTGTC
AGTGAGAATTTCATGGCACCTGTTAATGACGTGAGTAATAGTTGAGAACC
TCACTGCCGGTGCTCCAGCCTGACATGCACAGACCACCAACAGGAGATGT
CAAGAGTGGACTATGGAGTTTGTTCGTCATCTGGTTGTTCGGGGTCTACT
TGAGGAGAAAGCGGTTCAGATTGTCCAATCGAAACGTGATTCGCCAGCCC
ATGGAATCGGTTTGCAGCCTTCTGAACGACGCTTAGTCTGAGGGGGATAT
CCAAAGTGATGCAAGAACCAAGTATTAATGGATGTATGACTTGGAAAGTC
TTGGCTCCTAGCTACCACTAGTGAAGGCAACCCGAGAG
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Coding sequence (CDS) from alignment at ch8:2959981..2961018+

>KJC3_012231-T2 ID=KJC3_012231-T2|Name=KJC3_012231-T2|organism=Aspergillus niger KJC3|type=CDS|length=1782bp|location=Sequence derived from alignment at ch8:2959981..2961018+ (Aspergillus niger KJC3)
ATGCTGCTACAACAGACGACAACCACCGTAACCGTTCCAACCGAAGGTTG
TTGCTCTTCTACTCCATCGTATACTACCGTTATGCCTCCCAGAGCAATAT
TCCTCGTATCATCCCAAAATAGCCCGAGCCAGCGTGCCCATTTCTCAATC
TTCGTTCCGTCAGTCGCTTGTTCCACTATAGGTACTTCGATACACGTTAT
GGGTGCGCCTATGATGGGCTATCAACTCGAGTTCAAACGGAATCACTCCC
TATCTTCAAACGCAGAGCCATATGAGACGGCATTGCTTGGATATGTCGAC
TCTCACCATATTGCAGACTCTCCAGGAGAGAGGAGTATGTTCGTAGACCA
TGCCCCGAGGGATGATCTTGAAATCGCAGCCAGTCAGATACCGGCCCCCC
GTGTCAGTGAGAATTTCATGGCACCTGTTAATGACACCACCAACAGGAGA
TGTCAAGAGTGGACTATGGAGTTTGTTCGTCATCTGGTTGTTCGGGGTCT
ACTTGAGGAGAAAGCGGTTCAGATTGTCCAATCGAAACGTGATTCGCCAG
CCCATGGAATCGGTTTGCAGCCTTCTGAACGACGCTTAGTCTGAATGCTG
CTACAACAGACGACAACCACCGTAACCGTTCCAACCGAAGGTTGTTGCTC
TTCTACTCCATCGTATACTACCGTTATGCCTCCCAGAGCAATATTCCTCG
TATCATCCCAAAATAGCCCGAGCCAGCGTGCCCATTTCTCAATCTTCGTT
CCGTCAGTCGCTTGTTCCACTATAGGTACTTCGATACACGTTATGGGTGC
GCCTATGATGGGCTATCAACTCGAGTTCAAACGGAATCACTCCCTATCTT
CAAACGCAGAGCCATATGAGACGGCATTGCTTGGATATGTCGACTCTCAC
CATATTGCAGACTCTCCAGGAGAGAGGAGTATGTTCGTAGACCATGCCCC
GAGGGATGATCTTGAAATCGCAGCCAGTCAGATACCGGCCCCCCGTGTCA
GTGAGAATTTCATGGCACCTGTTAATGACACCACCAACAGGAGATGTCAA
GAGTGGACTATGGAGTTTGTTCGTCATCTGGTTGTTCGGGGTCTACTTGA
GGAGAAAGCGGTTCAGATTGTCCAATCGAAACGTGATTCGCCAGCCCATG
GAATCGGTTTGCAGCCTTCTGAACGACGCTTAGTCTGAATGCTGCTACAA
CAGACGACAACCACCGTAACCGTTCCAACCGAAGGTTGTTGCTCTTCTAC
TCCATCGTATACTACCGTTATGCCTCCCAGAGCAATATTCCTCGTATCAT
CCCAAAATAGCCCGAGCCAGCGTGCCCATTTCTCAATCTTCGTTCCGTCA
GTCGCTTGTTCCACTATAGGTACTTCGATACACGTTATGGGTGCGCCTAT
GATGGGCTATCAACTCGAGTTCAAACGGAATCACTCCCTATCTTCAAACG
CAGAGCCATATGAGACGGCATTGCTTGGATATGTCGACTCTCACCATATT
GCAGACTCTCCAGGAGAGAGGAGTATGTTCGTAGACCATGCCCCGAGGGA
TGATCTTGAAATCGCAGCCAGTCAGATACCGGCCCCCCGTGTCAGTGAGA
ATTTCATGGCACCTGTTAATGACACCACCAACAGGAGATGTCAAGAGTGG
ACTATGGAGTTTGTTCGTCATCTGGTTGTTCGGGGTCTACTTGAGGAGAA
AGCGGTTCAGATTGTCCAATCGAAACGTGATTCGCCAGCCCATGGAATCG
GTTTGCAGCCTTCTGAACGACGCTTAGTCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012231KJC3_012231Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012231-T2KJC3_012231-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012231-T2.utr5p1KJC3_012231-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012231-T2.exon1KJC3_012231-T2.exon1Aspergillus niger KJC3exon
KJC3_012231-T2.exon2KJC3_012231-T2.exon2Aspergillus niger KJC3exon
KJC3_012231-T2.exon3KJC3_012231-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012231-T2.cdsKJC3_012231-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012231-T2.utr3p1KJC3_012231-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2959981..2961018 +
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