|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2968204..2970068- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012234-T1 ID=KJC3_012234-T1|Name=KJC3_012234-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1865bp|location=Sequence derived from alignment at ch8:2968204..2970068- (Aspergillus niger KJC3)
CCCTGAATGTCATTCTAGTTTTATGATTTCACATCACAGCCAGCATCTCG
ACCGAGCTCCCCGTTTCACATCCTACTAAGTCGCGCATACAACTGGAGCT
ATCTCCACCAAATCATGCACTTTATTATATCAACAGATAACAAAAAGCCC
GACAGAAGTACCCGTCGACTTATCCGAAGCCATGTAATGCAAGGCATAAA
CAAAGGGCGGCCTCGATACGACCGACGGAAAAAACCCAGTCCGATACAGC
AGGATCAGCTTCCATCGCCACAATTAACAGAAATCTATCAGGACTCCGAC
ATTATCCAGTCGAACAAACTAGTCGTGGGGCCTGACCCGTCTTTCGCTCA
ATTCGCCGTTCAAGTGGACTCCCGCACCTTCGCTGATATACTACGATGTA
AGTAGGTTCTCCCGTATCCTAACCTATCGTTCGTTTGCGTAGCTAACGCG
AACACCATTTAGTCGCCAAATTATCAATGCAAATGTTCTTCCCATTGGGC
TTCTTGATTGACTTCGACAAAAGGGATAAATCCTGGTTTCATGACTCTAT
ACGCTCCGATGCAGCGTATCTGCATCTCACCGTGTCCGCATCAGAGGTAT
TCATGGGCTCGGTTCACGGTCGACAGAATGCCGATGAACTACTTGCTAAT
CGCAGGACCATGCTCCATTTTGCAAAGGGCGTGCAGATCCTCCGCGAGAG
ACTGACGGGCGTCGATCTCCAGACAAAAATATCCGACTTCACTGTACGAA
CCGTACTAATGCTAGCCATGACAGCGCATCTGATGGGCGAGTCGGAGGTC
GCGCAGAAACACATGGAGGGAATTCGAACAATCATGGACCTTCGAGGAGG
TCTGCGCTTATTTGAAAGCCAGAAGATTCTCATCGAGCTGTTCAGGTAAG
CCACCTACTTCCCCATAACAGCCAACCTACTACAATAATTGACCACCATT
AGATGGGACCTAGGCCTCGCCCTCCAAAACAACACCACGCCCATGTTCTT
CAGAGACAAATTCCTCGAGCCACTCACTCCATTCCCCACCATCTTCAACC
CCACCTTGAACCAAATTAACAATCCCCTCCTCCCCCAACTCCATTTAGAC
CCAACCCTAAAGACAACCTTTCACGTCCTCCAAAACTTCTGCACCCTAAT
CAACACAAGCATCACCGAGACCCCCCAACGCCGCCTCTCCCCAGACATCA
TCCCTTCCACGCTCTCCTCCGTAATGTATCGTCTTCTCCAAATGCCTTTC
CCCATGAACAGCAACAACGAAGCCTTCCGTCTAGGTCTCCTCACCTTCTG
CCATCATACCTTCCTTCAGTGGCAGGATAAGACACTGCCTTTTGTATTTT
TCCCTGCCTCGTATCAATCATGTCTCTTGTCGTTGATGGAACAATGCCAA
CGTCGTCAAGATGAGGAGGAGGATTCCTCGGAACTTATCCTCTGGCTATT
GATGGTCGGGATCCTTGCATTGCCGCCGCTGCCGTCGTTTCTGGGGACGG
ATCTCTGGATGAGGGGGTATTTGCGGGAGTGGTTGGAGAAGTTGGAGATC
AGGACGTGGGGGGAGTTGCGGGGGATTATGAAGAGGTGGGTGTGGGTGGA
TTTGATGCATGATCTTGCTGGGGAGGGAGTGTTGGGTGATGTGCTAAAAG
TATAATTGGTGCCGATAGTAGTTCATTTGGTATTATGTTGTTTATCGGCA
TCAAACACTAAGAGTAATACTCTCAGGTGTTTGAAATCGGGGTATAGCAG
TAAAAATTTATTTGTCTTCATTGGAAAGGTGGCGAACGACTTGGACTGTC
GTGTCATAACTGACTTAATATGTGGCGCTGTTACTCCAATTAAGGGTAAT
CTTCACCCTACTGGG back to topCoding sequence (CDS) from alignment at ch8:2968204..2970068- >KJC3_012234-T1 ID=KJC3_012234-T1|Name=KJC3_012234-T1|organism=Aspergillus niger KJC3|type=CDS|length=4257bp|location=Sequence derived from alignment at ch8:2968204..2970068- (Aspergillus niger KJC3)
ATGGGACCTAGGCCTCGCCCTCCAAAACAACACCACGCCCATGTTCTTCA
GAGACAAATTCCTCGAGCCACTCACTCCATTCCCCACCATCTTCAACCCC
ACCTTGAACCAAATTAACAATCCCCTCCTCCCCCAACTCCATTTAGACCC
AACCCTAAAGACAACCTTTCACGTCCTCCAAAACTTCTGCACCCTAATCA
ACACAAGCATCACCGAGACCCCCCAACGCCGCCTCTCCCCAGACATCATC
CCTTCCACGCTCTCCTCCGTAATGTATCGTCTTCTCCAAATGCCTTTCCC
CATGAACAGCAACAACGAAGCCTTCCGTCTAGGTCTCCTCACCTTCTGCC
ATCATACCTTCCTTCAGTGGCAGGATAAGACACTGCCTTTTGTATTTTTC
CCTGCCTCGTATCAATCATGTCTCTTGTCGTTGATGGAACAATGCCAACG
TCGTCAAGATGAGGAGGAGGATTCCTCGGAACTTATCCTCTGGCTATTGA
TGGTCGGGATCCTTGCATTGCCGCCGCTGCCGTCGTTTCTGGGGACGGAT
CTCTGGATGAGGGGGTATTTGCGGGAGTGGTTGGAGAAGTTGGAGATCAG
GACGTGGGGGGAGTTGCGGGGGATTATGAAGAGGTGGGTGTGGGTGGATT
TGATGCATGATCTTGCTGGGGAGGGAGTGTTGGGTGATGTGCTAAAAGTA
TAATCGCCAAATTATCAATGCAAATGTTCTTCCCATTGGGCTTCTTGATT
GACTTCGACAAAAGGGATAAATCCTGGTTTCATGACTCTATACGCTCCGA
TGCAGCGTATCTGCATCTCACCGTGTCCGCATCAGAGGTATTCATGGGCT
CGGTTCACGGTCGACAGAATGCCGATGAACTACTTGCTAATCGCAGGACC
ATGCTCCATTTTGCAAAGGGCGTGCAGATCCTCCGCGAGAGACTGACGGG
CGTCGATCTCCAGACAAAAATATCCGACTTCACTGTACGAACCGTACTAA
TGCTAGCCATGACAGCGCATCTGATGGGCGAGTCGGAGGTCGCGCAGAAA
CACATGGAGGGAATTCGAACAATCATGGACCTTCGAGGAGGTCTGCGCTT
ATTTGAAAGCCAGAAGATTCTCATCGAGCTGTTCAGATGCACTTTATTAT
ATCAACAGATAACAAAAAGCCCGACAGAAGTACCCGTCGACTTATCCGAA
GCCATGTAATGCAAGGCATAAACAAAGGGCGGCCTCGATACGACCGACGG
AAAAAACCCAGTCCGATACAGCAGGATCAGCTTCCATCGCCACAATTAAC
AGAAATCTATCAGGACTCCGACATTATCCAGTCGAACAAACTAGTCGTGG
GGCCTGACCCGTCTTTCGCTCAATTCGCCGTTCAAGTGGACTCCCGCACC
TTCGCTGATATACTACGATATGGGACCTAGGCCTCGCCCTCCAAAACAAC
ACCACGCCCATGTTCTTCAGAGACAAATTCCTCGAGCCACTCACTCCATT
CCCCACCATCTTCAACCCCACCTTGAACCAAATTAACAATCCCCTCCTCC
CCCAACTCCATTTAGACCCAACCCTAAAGACAACCTTTCACGTCCTCCAA
AACTTCTGCACCCTAATCAACACAAGCATCACCGAGACCCCCCAACGCCG
CCTCTCCCCAGACATCATCCCTTCCACGCTCTCCTCCGTAATGTATCGTC
TTCTCCAAATGCCTTTCCCCATGAACAGCAACAACGAAGCCTTCCGTCTA
GGTCTCCTCACCTTCTGCCATCATACCTTCCTTCAGTGGCAGGATAAGAC
ACTGCCTTTTGTATTTTTCCCTGCCTCGTATCAATCATGTCTCTTGTCGT
TGATGGAACAATGCCAACGTCGTCAAGATGAGGAGGAGGATTCCTCGGAA
CTTATCCTCTGGCTATTGATGGTCGGGATCCTTGCATTGCCGCCGCTGCC
GTCGTTTCTGGGGACGGATCTCTGGATGAGGGGGTATTTGCGGGAGTGGT
TGGAGAAGTTGGAGATCAGGACGTGGGGGGAGTTGCGGGGGATTATGAAG
AGGTGGGTGTGGGTGGATTTGATGCATGATCTTGCTGGGGAGGGAGTGTT
GGGTGATGTGCTAAAAGTATAATCGCCAAATTATCAATGCAAATGTTCTT
CCCATTGGGCTTCTTGATTGACTTCGACAAAAGGGATAAATCCTGGTTTC
ATGACTCTATACGCTCCGATGCAGCGTATCTGCATCTCACCGTGTCCGCA
TCAGAGGTATTCATGGGCTCGGTTCACGGTCGACAGAATGCCGATGAACT
ACTTGCTAATCGCAGGACCATGCTCCATTTTGCAAAGGGCGTGCAGATCC
TCCGCGAGAGACTGACGGGCGTCGATCTCCAGACAAAAATATCCGACTTC
ACTGTACGAACCGTACTAATGCTAGCCATGACAGCGCATCTGATGGGCGA
GTCGGAGGTCGCGCAGAAACACATGGAGGGAATTCGAACAATCATGGACC
TTCGAGGAGGTCTGCGCTTATTTGAAAGCCAGAAGATTCTCATCGAGCTG
TTCAGATGCACTTTATTATATCAACAGATAACAAAAAGCCCGACAGAAGT
ACCCGTCGACTTATCCGAAGCCATGTAATGCAAGGCATAAACAAAGGGCG
GCCTCGATACGACCGACGGAAAAAACCCAGTCCGATACAGCAGGATCAGC
TTCCATCGCCACAATTAACAGAAATCTATCAGGACTCCGACATTATCCAG
TCGAACAAACTAGTCGTGGGGCCTGACCCGTCTTTCGCTCAATTCGCCGT
TCAAGTGGACTCCCGCACCTTCGCTGATATACTACGATATGGGACCTAGG
CCTCGCCCTCCAAAACAACACCACGCCCATGTTCTTCAGAGACAAATTCC
TCGAGCCACTCACTCCATTCCCCACCATCTTCAACCCCACCTTGAACCAA
ATTAACAATCCCCTCCTCCCCCAACTCCATTTAGACCCAACCCTAAAGAC
AACCTTTCACGTCCTCCAAAACTTCTGCACCCTAATCAACACAAGCATCA
CCGAGACCCCCCAACGCCGCCTCTCCCCAGACATCATCCCTTCCACGCTC
TCCTCCGTAATGTATCGTCTTCTCCAAATGCCTTTCCCCATGAACAGCAA
CAACGAAGCCTTCCGTCTAGGTCTCCTCACCTTCTGCCATCATACCTTCC
TTCAGTGGCAGGATAAGACACTGCCTTTTGTATTTTTCCCTGCCTCGTAT
CAATCATGTCTCTTGTCGTTGATGGAACAATGCCAACGTCGTCAAGATGA
GGAGGAGGATTCCTCGGAACTTATCCTCTGGCTATTGATGGTCGGGATCC
TTGCATTGCCGCCGCTGCCGTCGTTTCTGGGGACGGATCTCTGGATGAGG
GGGTATTTGCGGGAGTGGTTGGAGAAGTTGGAGATCAGGACGTGGGGGGA
GTTGCGGGGGATTATGAAGAGGTGGGTGTGGGTGGATTTGATGCATGATC
TTGCTGGGGAGGGAGTGTTGGGTGATGTGCTAAAAGTATAATCGCCAAAT
TATCAATGCAAATGTTCTTCCCATTGGGCTTCTTGATTGACTTCGACAAA
AGGGATAAATCCTGGTTTCATGACTCTATACGCTCCGATGCAGCGTATCT
GCATCTCACCGTGTCCGCATCAGAGGTATTCATGGGCTCGGTTCACGGTC
GACAGAATGCCGATGAACTACTTGCTAATCGCAGGACCATGCTCCATTTT
GCAAAGGGCGTGCAGATCCTCCGCGAGAGACTGACGGGCGTCGATCTCCA
GACAAAAATATCCGACTTCACTGTACGAACCGTACTAATGCTAGCCATGA
CAGCGCATCTGATGGGCGAGTCGGAGGTCGCGCAGAAACACATGGAGGGA
ATTCGAACAATCATGGACCTTCGAGGAGGTCTGCGCTTATTTGAAAGCCA
GAAGATTCTCATCGAGCTGTTCAGATGCACTTTATTATATCAACAGATAA
CAAAAAGCCCGACAGAAGTACCCGTCGACTTATCCGAAGCCATGTAATGC
AAGGCATAAACAAAGGGCGGCCTCGATACGACCGACGGAAAAAACCCAGT
CCGATACAGCAGGATCAGCTTCCATCGCCACAATTAACAGAAATCTATCA
GGACTCCGACATTATCCAGTCGAACAAACTAGTCGTGGGGCCTGACCCGT
CTTTCGCTCAATTCGCCGTTCAAGTGGACTCCCGCACCTTCGCTGATATA
CTACGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012234-T1.utr3p1 | KJC3_012234-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012234-T1.utr5p1 | KJC3_012234-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2968204..2970068 - |
|
