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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2991491..2993085+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012244-T1 ID=KJC3_012244-T1|Name=KJC3_012244-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1595bp|location=Sequence derived from alignment at ch8:2991491..2993085+ (Aspergillus niger KJC3)
AAAACATCAACATCAACATCAACATCAACAACTTTAGCAGTCACATTGCC
TTTGCGCATCTGTGCAGTCATTAACGACGTCCAATTTGCTACACACTAGA
CAGTCATCATGTCTCGCCCATCCTCCATGGCGCAGCGCCCCCTCACGCTT
ACAGAGGAGCTCGAGAAGCTCGAGCAGTCCATCACCCTGACCCTCCAAGG
TAACAACATCACTTGATATAGCTCCTGCATACCCTCTGACATTAGTCCTC
ACCAGAAATCGACCACAACTTTAGCCAAGCCCACCGCATCGTCACGACAA
ATATTCTCCCCTTGGTCGAGCAATACGCAGAGAGCTCCCGCGATGTCTGG
GATGGCGCAAAGGTACATCACCTTCCATACCCCCAACAACGACCCCTGCA
GGCACTCTAACTCCCCACCAGTTCTGGAAACAATTCTTCGAAGCCAGCGC
CAATGTCTCCCTCTCCGGCTACGAAGAGAAGCCCGACGGAGATACCACCG
TCCAAGAACCGACCAACCTAACGGCCGAAGAAGATCAAACCGTTACCGAA
ACAGCCGGCGAAGACGACAGCCACCACCAACTCCACCGAGCCGACGACAT
CGAGCTCACTTCCCTCAGCCTCTCCTCCCACAGCACTCCTCGTGTCACCG
GTCATGACAACCGCTACGCCGCCAATGACGATGACACCTCGTCCATCGCG
CACCCAACCCCAGATACCCGCTTCCGCGACGATGACGACGACGAAAACGA
CCCCTACCTCCCGACCACCCCAGCCAAATACTCCTCCGCCAGAACCCATC
ACTACACCGACGACTACTCCCACAACCAATCCCATACTCCAATGTCATCA
TCACCCTTTATTCCTCCCGCTGAAGACCCAATTATGCACCAGATGGCCGA
CAAAACATACCGCGTGCAAGCCACCCCGCTCGGAAAGGGATACGGATACG
AGTCCAGATCCAAGTTTACCGTTACACCAAAGACAACAAACAACAGCAAG
AAGTACGCGTACGATGACTCTCCTATCTCCAGTCCGGAGCCGGAAGCCCC
CAAATTGCATGCGGAGATCTTTTCGTCTCCTATGAAGGGCGTGGAAACGC
CGAATACGGGCCGCAAGAGGAGACCCAGTGCGAATCAGCTGCGGATTACC
CCGAAGCCCGGGATAAGTGTGCTGACTCCTGCACGCGGCGGCGGTGGTGG
TGCGAGGCGATCGGCTTGGGACAGTGATGATGACTTTGATGACGGGGATG
ATGAGGATATGGGACCGAGTCCTCCTAAGACGATGCAGTTTCATATACCG
CAGAGTCGGTTGATGAAGACGCCTGGTGAGTTAGCACGTTCCCCCTGTTC
CTATTTTCCTTGGTTTGTACGTCCAAAAATGCAGTACATGCTAACCAATG
TATGCTATAACAGCCAAGGAAGCATCAAAACGCATCGTGGAAGACCTGCT
CTTCACCGCCGGAGCCAACGATACAACAGACGATCTACCCATCGAACAAA
GTCCGAGTATCATCCAACGGGTGGAGCGACTGGAAGATGAGACATTCTAG
ATAGCCATTACCCAAAATAGAATACAACATTCATCCTTACCACCA back to topCoding sequence (CDS) from alignment at ch8:2991491..2993085+ >KJC3_012244-T1 ID=KJC3_012244-T1|Name=KJC3_012244-T1|organism=Aspergillus niger KJC3|type=CDS|length=4956bp|location=Sequence derived from alignment at ch8:2991491..2993085+ (Aspergillus niger KJC3)
ATGTCTCGCCCATCCTCCATGGCGCAGCGCCCCCTCACGCTTACAGAGGA
GCTCGAGAAGCTCGAGCAGTCCATCACCCTGACCCTCCAAGAAATCGACC
ACAACTTTAGCCAAGCCCACCGCATCGTCACGACAAATATTCTCCCCTTG
GTCGAGCAATACGCAGAGAGCTCCCGCGATGTCTGGGATGGCGCAAAGTT
CTGGAAACAATTCTTCGAAGCCAGCGCCAATGTCTCCCTCTCCGGCTACG
AAGAGAAGCCCGACGGAGATACCACCGTCCAAGAACCGACCAACCTAACG
GCCGAAGAAGATCAAACCGTTACCGAAACAGCCGGCGAAGACGACAGCCA
CCACCAACTCCACCGAGCCGACGACATCGAGCTCACTTCCCTCAGCCTCT
CCTCCCACAGCACTCCTCGTGTCACCGGTCATGACAACCGCTACGCCGCC
AATGACGATGACACCTCGTCCATCGCGCACCCAACCCCAGATACCCGCTT
CCGCGACGATGACGACGACGAAAACGACCCCTACCTCCCGACCACCCCAG
CCAAATACTCCTCCGCCAGAACCCATCACTACACCGACGACTACTCCCAC
AACCAATCCCATACTCCAATGTCATCATCACCCTTTATTCCTCCCGCTGA
AGACCCAATTATGCACCAGATGGCCGACAAAACATACCGCGTGCAAGCCA
CCCCGCTCGGAAAGGGATACGGATACGAGTCCAGATCCAAGTTTACCGTT
ACACCAAAGACAACAAACAACAGCAAGAAGTACGCGTACGATGACTCTCC
TATCTCCAGTCCGGAGCCGGAAGCCCCCAAATTGCATGCGGAGATCTTTT
CGTCTCCTATGAAGGGCGTGGAAACGCCGAATACGGGCCGCAAGAGGAGA
CCCAGTGCGAATCAGCTGCGGATTACCCCGAAGCCCGGGATAAGTGTGCT
GACTCCTGCACGCGGCGGCGGTGGTGGTGCGAGGCGATCGGCTTGGGACA
GTGATGATGACTTTGATGACGGGGATGATGAGGATATGGGACCGAGTCCT
CCTAAGACGATGCAGTTTCATATACCGCAGAGTCGGTTGATGAAGACGCC
TGCCAAGGAAGCATCAAAACGCATCGTGGAAGACCTGCTCTTCACCGCCG
GAGCCAACGATACAACAGACGATCTACCCATCGAACAAAGTCCGAGTATC
ATCCAACGGGTGGAGCGACTGGAAGATGAGACATTCTAGATGTCTCGCCC
ATCCTCCATGGCGCAGCGCCCCCTCACGCTTACAGAGGAGCTCGAGAAGC
TCGAGCAGTCCATCACCCTGACCCTCCAAGAAATCGACCACAACTTTAGC
CAAGCCCACCGCATCGTCACGACAAATATTCTCCCCTTGGTCGAGCAATA
CGCAGAGAGCTCCCGCGATGTCTGGGATGGCGCAAAGTTCTGGAAACAAT
TCTTCGAAGCCAGCGCCAATGTCTCCCTCTCCGGCTACGAAGAGAAGCCC
GACGGAGATACCACCGTCCAAGAACCGACCAACCTAACGGCCGAAGAAGA
TCAAACCGTTACCGAAACAGCCGGCGAAGACGACAGCCACCACCAACTCC
ACCGAGCCGACGACATCGAGCTCACTTCCCTCAGCCTCTCCTCCCACAGC
ACTCCTCGTGTCACCGGTCATGACAACCGCTACGCCGCCAATGACGATGA
CACCTCGTCCATCGCGCACCCAACCCCAGATACCCGCTTCCGCGACGATG
ACGACGACGAAAACGACCCCTACCTCCCGACCACCCCAGCCAAATACTCC
TCCGCCAGAACCCATCACTACACCGACGACTACTCCCACAACCAATCCCA
TACTCCAATGTCATCATCACCCTTTATTCCTCCCGCTGAAGACCCAATTA
TGCACCAGATGGCCGACAAAACATACCGCGTGCAAGCCACCCCGCTCGGA
AAGGGATACGGATACGAGTCCAGATCCAAGTTTACCGTTACACCAAAGAC
AACAAACAACAGCAAGAAGTACGCGTACGATGACTCTCCTATCTCCAGTC
CGGAGCCGGAAGCCCCCAAATTGCATGCGGAGATCTTTTCGTCTCCTATG
AAGGGCGTGGAAACGCCGAATACGGGCCGCAAGAGGAGACCCAGTGCGAA
TCAGCTGCGGATTACCCCGAAGCCCGGGATAAGTGTGCTGACTCCTGCAC
GCGGCGGCGGTGGTGGTGCGAGGCGATCGGCTTGGGACAGTGATGATGAC
TTTGATGACGGGGATGATGAGGATATGGGACCGAGTCCTCCTAAGACGAT
GCAGTTTCATATACCGCAGAGTCGGTTGATGAAGACGCCTGCCAAGGAAG
CATCAAAACGCATCGTGGAAGACCTGCTCTTCACCGCCGGAGCCAACGAT
ACAACAGACGATCTACCCATCGAACAAAGTCCGAGTATCATCCAACGGGT
GGAGCGACTGGAAGATGAGACATTCTAGATGTCTCGCCCATCCTCCATGG
CGCAGCGCCCCCTCACGCTTACAGAGGAGCTCGAGAAGCTCGAGCAGTCC
ATCACCCTGACCCTCCAAGAAATCGACCACAACTTTAGCCAAGCCCACCG
CATCGTCACGACAAATATTCTCCCCTTGGTCGAGCAATACGCAGAGAGCT
CCCGCGATGTCTGGGATGGCGCAAAGTTCTGGAAACAATTCTTCGAAGCC
AGCGCCAATGTCTCCCTCTCCGGCTACGAAGAGAAGCCCGACGGAGATAC
CACCGTCCAAGAACCGACCAACCTAACGGCCGAAGAAGATCAAACCGTTA
CCGAAACAGCCGGCGAAGACGACAGCCACCACCAACTCCACCGAGCCGAC
GACATCGAGCTCACTTCCCTCAGCCTCTCCTCCCACAGCACTCCTCGTGT
CACCGGTCATGACAACCGCTACGCCGCCAATGACGATGACACCTCGTCCA
TCGCGCACCCAACCCCAGATACCCGCTTCCGCGACGATGACGACGACGAA
AACGACCCCTACCTCCCGACCACCCCAGCCAAATACTCCTCCGCCAGAAC
CCATCACTACACCGACGACTACTCCCACAACCAATCCCATACTCCAATGT
CATCATCACCCTTTATTCCTCCCGCTGAAGACCCAATTATGCACCAGATG
GCCGACAAAACATACCGCGTGCAAGCCACCCCGCTCGGAAAGGGATACGG
ATACGAGTCCAGATCCAAGTTTACCGTTACACCAAAGACAACAAACAACA
GCAAGAAGTACGCGTACGATGACTCTCCTATCTCCAGTCCGGAGCCGGAA
GCCCCCAAATTGCATGCGGAGATCTTTTCGTCTCCTATGAAGGGCGTGGA
AACGCCGAATACGGGCCGCAAGAGGAGACCCAGTGCGAATCAGCTGCGGA
TTACCCCGAAGCCCGGGATAAGTGTGCTGACTCCTGCACGCGGCGGCGGT
GGTGGTGCGAGGCGATCGGCTTGGGACAGTGATGATGACTTTGATGACGG
GGATGATGAGGATATGGGACCGAGTCCTCCTAAGACGATGCAGTTTCATA
TACCGCAGAGTCGGTTGATGAAGACGCCTGCCAAGGAAGCATCAAAACGC
ATCGTGGAAGACCTGCTCTTCACCGCCGGAGCCAACGATACAACAGACGA
TCTACCCATCGAACAAAGTCCGAGTATCATCCAACGGGTGGAGCGACTGG
AAGATGAGACATTCTAGATGTCTCGCCCATCCTCCATGGCGCAGCGCCCC
CTCACGCTTACAGAGGAGCTCGAGAAGCTCGAGCAGTCCATCACCCTGAC
CCTCCAAGAAATCGACCACAACTTTAGCCAAGCCCACCGCATCGTCACGA
CAAATATTCTCCCCTTGGTCGAGCAATACGCAGAGAGCTCCCGCGATGTC
TGGGATGGCGCAAAGTTCTGGAAACAATTCTTCGAAGCCAGCGCCAATGT
CTCCCTCTCCGGCTACGAAGAGAAGCCCGACGGAGATACCACCGTCCAAG
AACCGACCAACCTAACGGCCGAAGAAGATCAAACCGTTACCGAAACAGCC
GGCGAAGACGACAGCCACCACCAACTCCACCGAGCCGACGACATCGAGCT
CACTTCCCTCAGCCTCTCCTCCCACAGCACTCCTCGTGTCACCGGTCATG
ACAACCGCTACGCCGCCAATGACGATGACACCTCGTCCATCGCGCACCCA
ACCCCAGATACCCGCTTCCGCGACGATGACGACGACGAAAACGACCCCTA
CCTCCCGACCACCCCAGCCAAATACTCCTCCGCCAGAACCCATCACTACA
CCGACGACTACTCCCACAACCAATCCCATACTCCAATGTCATCATCACCC
TTTATTCCTCCCGCTGAAGACCCAATTATGCACCAGATGGCCGACAAAAC
ATACCGCGTGCAAGCCACCCCGCTCGGAAAGGGATACGGATACGAGTCCA
GATCCAAGTTTACCGTTACACCAAAGACAACAAACAACAGCAAGAAGTAC
GCGTACGATGACTCTCCTATCTCCAGTCCGGAGCCGGAAGCCCCCAAATT
GCATGCGGAGATCTTTTCGTCTCCTATGAAGGGCGTGGAAACGCCGAATA
CGGGCCGCAAGAGGAGACCCAGTGCGAATCAGCTGCGGATTACCCCGAAG
CCCGGGATAAGTGTGCTGACTCCTGCACGCGGCGGCGGTGGTGGTGCGAG
GCGATCGGCTTGGGACAGTGATGATGACTTTGATGACGGGGATGATGAGG
ATATGGGACCGAGTCCTCCTAAGACGATGCAGTTTCATATACCGCAGAGT
CGGTTGATGAAGACGCCTGCCAAGGAAGCATCAAAACGCATCGTGGAAGA
CCTGCTCTTCACCGCCGGAGCCAACGATACAACAGACGATCTACCCATCG
AACAAAGTCCGAGTATCATCCAACGGGTGGAGCGACTGGAAGATGAGACA
TTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0072686 | mitotic spindle |
| GO:0042729 | DASH complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008608 | attachment of spindle microtubules to kinetochore |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012244-T1.utr5p1 | KJC3_012244-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012244-T1.utr3p1 | KJC3_012244-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013964 |
| DBxref | PFAM:PF08655 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2991491..2993085 + |
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