|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3014147..3015125+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012248-T1 ID=KJC3_012248-T1|Name=KJC3_012248-T1|organism=Aspergillus niger KJC3|type=mRNA|length=979bp|location=Sequence derived from alignment at ch8:3014147..3015125+ (Aspergillus niger KJC3)
CTTCTACTACATTCCTATTCCCTCTTCACCCTATAGATCATTCATACACC
ACTAGTACTAGTTATACTATACCCATTGAACAATGTCAACATCCGCAGCC
CAAGCTACACCCTCACCACTCCCACCGCAACGACAACCACCACCAGAGTC
ATCACCACCACCCAGTTCCAAACCACCCCTCCCTCAAGACCAGGATATCC
CCCAACCCACCCTCCGCCTTCAAATCAACGACCTCCGCCATCCAGCCTCG
AAAGCTTTCCTAACCCTCCTCCCCGACCTAAACTCTACACTCACAACCGC
CCTCTCCACCATAATCCAGCACCTCTACACACCCCCCTTACACCGTCACC
ACCACCAACAAACACCAACATTCACCCCCTCCCCACCCCCGACCCGCTCC
GTAACGCTCCTCCTCCGCGCCATCGACGGCGTAGCCTACACAACCGGCAC
GGAGCTTGACAACGACCACAAAGAAATCCACCTGTCCCTCTCCTACATTC
GAACCATTACCACCAATAGCAATCCCAATCCCACCGCCGAACTAACCGGC
GTCCTCACCCACGAGCTCGTCCACTGCTACCAGCACACCGCGCCCCCAGA
CTCCACTACTACCCCACAACCCCCAGGCGGCCTTATCGAGGGCATCGCGG
ATTTCGTGCGCCTCAAGGCAGGTCTAGAACCGCCGCATTGGAAGCGCCCT
GCGTCGGCGAAGGAGAGAGCGGACAAGTGGGACCAGGGGTATCAGCATAC
AGCGTATTTCTTGGCTTGGTTGGAGGATGTTAAGATTGGACGGGGGGCGG
TCGGGATGCTGAATGATCGGTTGTTGAGGGTGGGGTATGGGGATGGGTTC
TGGGAGGGGCTTTTTGGGATGGGGGTTTTGGAGCTTTGGGAGGAGTATGG
AGCGTGGTTGGATCGGGGGGGAGTAGGGGATGGTACTACGGGTGGGTGCT
GGGAGGATGAGATTGTTGATCGGGTATGA back to topCoding sequence (CDS) from alignment at ch8:3014147..3015125+ >KJC3_012248-T1 ID=KJC3_012248-T1|Name=KJC3_012248-T1|organism=Aspergillus niger KJC3|type=CDS|length=897bp|location=Sequence derived from alignment at ch8:3014147..3015125+ (Aspergillus niger KJC3)
ATGTCAACATCCGCAGCCCAAGCTACACCCTCACCACTCCCACCGCAACG
ACAACCACCACCAGAGTCATCACCACCACCCAGTTCCAAACCACCCCTCC
CTCAAGACCAGGATATCCCCCAACCCACCCTCCGCCTTCAAATCAACGAC
CTCCGCCATCCAGCCTCGAAAGCTTTCCTAACCCTCCTCCCCGACCTAAA
CTCTACACTCACAACCGCCCTCTCCACCATAATCCAGCACCTCTACACAC
CCCCCTTACACCGTCACCACCACCAACAAACACCAACATTCACCCCCTCC
CCACCCCCGACCCGCTCCGTAACGCTCCTCCTCCGCGCCATCGACGGCGT
AGCCTACACAACCGGCACGGAGCTTGACAACGACCACAAAGAAATCCACC
TGTCCCTCTCCTACATTCGAACCATTACCACCAATAGCAATCCCAATCCC
ACCGCCGAACTAACCGGCGTCCTCACCCACGAGCTCGTCCACTGCTACCA
GCACACCGCGCCCCCAGACTCCACTACTACCCCACAACCCCCAGGCGGCC
TTATCGAGGGCATCGCGGATTTCGTGCGCCTCAAGGCAGGTCTAGAACCG
CCGCATTGGAAGCGCCCTGCGTCGGCGAAGGAGAGAGCGGACAAGTGGGA
CCAGGGGTATCAGCATACAGCGTATTTCTTGGCTTGGTTGGAGGATGTTA
AGATTGGACGGGGGGCGGTCGGGATGCTGAATGATCGGTTGTTGAGGGTG
GGGTATGGGGATGGGTTCTGGGAGGGGCTTTTTGGGATGGGGGTTTTGGA
GCTTTGGGAGGAGTATGGAGCGTGGTTGGATCGGGGGGGAGTAGGGGATG
GTACTACGGGTGGGTGCTGGGAGGATGAGATTGTTGATCGGGTATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012248-T1.utr5p1 | KJC3_012248-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007541 |
| DBxref | PFAM:PF04450 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3014147..3015125 + |
|
