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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3015614..3016834- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012249-T1 ID=KJC3_012249-T1|Name=KJC3_012249-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1221bp|location=Sequence derived from alignment at ch8:3015614..3016834- (Aspergillus niger KJC3)
ATGAAGAGGCTGCAGCTCCAACGATGGAGCAGTTCGGTCCTTTCGGCGCA
GGCCCGGACTGGTGGCCGCCTGCAGCACCGTCTCTACACTGGCATCCGGC
ATCAATCGACCGCTTCGCCTGCTACGCCGGCTGCCAATGATCAATTGATC
GAGGAAGACCCTCTAGCATCATCTATTCGCCCCCCTACCTCCCGACAGTC
GAAGTACCAACTCCCGTCTCCCCCGGTCGAGGCCGCACGCGAGTCCGCCA
AACTGGCTGCGCTTCACGCACGACTTTACCTTCCTTCACGATTACCGCTC
GAGACCCTTGCTCGCTCTCTCGTGGACGCCTCGGCTGATCCGAACCCCAA
ATTCAACAATGAATCTTTGGCCACCCTCGGTCACGATTTGTTGACACACT
ACACCTCCGAATACCTCATCTGCACGTATCCCCGACTCCCCTTGACCGTT
ATATTCGCAGCCATGTATGCGTATGTCGGGCCAAAGACCTTGGCCGCAAT
GGCGAGAGAATGGGGTGTGGAGTCCGCTGCTGCTCCTGGTGGAGAAGTTG
ACCCCGGCTACCTGCAGTTCAACAGAGTACTCCCGGGAGTTGACGTGCAC
TCGAAGCCTGTCACTGGCACAGCGAGACCTCACGAAGATCAGACGCATTG
GCGGAAGTCCATCACGTCAAGTGTCGTCTACGACAATGAGTTCGGAGACC
CGGTCAAGGGGCCCAAGGATCCCTCGGAACAGTCCAAGCAGGACGTCCAG
AACACCCAGGGCGTGACTGCCGAACAGGCTAACGCAACCTTTGTGCGTGC
TGTGATGGGTGCTATCTACCTGCACGCAGGCCGCCCTGCTGCCAAGCGGT
TCTTCGAGCAGCACTTCCTCTCTCGTCACCTCAACATCTCCGACCTGTTC
AACTTCTCCCAACCCGCTCGGGATCTTGCTCGCCTGTGTGCTCGAGAGAA
CTTCGAGCAGCCCGTTGCCCGGATCATCAGTGAAACCGGTCGCAAGAGCA
GACACCCCGTGTTTGTCGTTGGCATCTACTCTGGTCAGGATAAGTTGGGC
GAGGGCGCTGGCGCCAGTCTGCTCGAGGCTCGTTCCAGGGCTGCTGTCGC
CGCCCTGAAGGGATGGTACCTGTACAGTCCGCTGAACGTGCGCGTGCCTA
GTTCGATGGAGGAAGAGGGAGCCGCTCCCTGGAAGCCGGTGCACGTGGAC
TTGGGCGAGGTGATTGTGTAG back to topCoding sequence (CDS) from alignment at ch8:3015614..3016834- >KJC3_012249-T1 ID=KJC3_012249-T1|Name=KJC3_012249-T1|organism=Aspergillus niger KJC3|type=CDS|length=1221bp|location=Sequence derived from alignment at ch8:3015614..3016834- (Aspergillus niger KJC3)
ATGAAGAGGCTGCAGCTCCAACGATGGAGCAGTTCGGTCCTTTCGGCGCA
GGCCCGGACTGGTGGCCGCCTGCAGCACCGTCTCTACACTGGCATCCGGC
ATCAATCGACCGCTTCGCCTGCTACGCCGGCTGCCAATGATCAATTGATC
GAGGAAGACCCTCTAGCATCATCTATTCGCCCCCCTACCTCCCGACAGTC
GAAGTACCAACTCCCGTCTCCCCCGGTCGAGGCCGCACGCGAGTCCGCCA
AACTGGCTGCGCTTCACGCACGACTTTACCTTCCTTCACGATTACCGCTC
GAGACCCTTGCTCGCTCTCTCGTGGACGCCTCGGCTGATCCGAACCCCAA
ATTCAACAATGAATCTTTGGCCACCCTCGGTCACGATTTGTTGACACACT
ACACCTCCGAATACCTCATCTGCACGTATCCCCGACTCCCCTTGACCGTT
ATATTCGCAGCCATGTATGCGTATGTCGGGCCAAAGACCTTGGCCGCAAT
GGCGAGAGAATGGGGTGTGGAGTCCGCTGCTGCTCCTGGTGGAGAAGTTG
ACCCCGGCTACCTGCAGTTCAACAGAGTACTCCCGGGAGTTGACGTGCAC
TCGAAGCCTGTCACTGGCACAGCGAGACCTCACGAAGATCAGACGCATTG
GCGGAAGTCCATCACGTCAAGTGTCGTCTACGACAATGAGTTCGGAGACC
CGGTCAAGGGGCCCAAGGATCCCTCGGAACAGTCCAAGCAGGACGTCCAG
AACACCCAGGGCGTGACTGCCGAACAGGCTAACGCAACCTTTGTGCGTGC
TGTGATGGGTGCTATCTACCTGCACGCAGGCCGCCCTGCTGCCAAGCGGT
TCTTCGAGCAGCACTTCCTCTCTCGTCACCTCAACATCTCCGACCTGTTC
AACTTCTCCCAACCCGCTCGGGATCTTGCTCGCCTGTGTGCTCGAGAGAA
CTTCGAGCAGCCCGTTGCCCGGATCATCAGTGAAACCGGTCGCAAGAGCA
GACACCCCGTGTTTGTCGTTGGCATCTACTCTGGTCAGGATAAGTTGGGC
GAGGGCGCTGGCGCCAGTCTGCTCGAGGCTCGTTCCAGGGCTGCTGTCGC
CGCCCTGAAGGGATGGTACCTGTACAGTCCGCTGAACGTGCGCGTGCCTA
GTTCGATGGAGGAAGAGGGAGCCGCTCCCTGGAAGCCGGTGCACGTGGAC
TTGGGCGAGGTGATTGTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004525 | ribonuclease III activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263CGP |
| DBxref | InterPro:IPR036389 |
| DBxref | InterPro:IPR000999 |
| DBxref | InterPro:IPR014720 |
| DBxref | PFAM:PF00636 |
| DBxref | PFAM:PF00035 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3015614..3016834 - |
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