You are here

Home

KJC3_012251-T1, KJC3_012251-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012251-T1
Unique NameKJC3_012251-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3017722..3019110-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012251-T1 ID=KJC3_012251-T1|Name=KJC3_012251-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1389bp|location=Sequence derived from alignment at ch8:3017722..3019110- (Aspergillus niger KJC3)
TACAGGATCTCACCAGTCATTCTCCTTTGAAGGTAATTGAGCGCTTCCGT
AACCATGTTGGAAGGCCATAGCTCTTCGGAGCACTCTAGAAACAATGTGG
ACTTCTGCACAATGGGCATGTTCATTCTTGGTACGCCATGATCTACCCAT
ATGGAAGTCGAAATCGCACTATGTACTTACGGAACCCCCCTTCCCTGTGA
TATAGACGATATAGACTTCGATGGAACAAGACCCAATGTAAAGAACGTTC
TAGGAGGCGCTGCGTCATTTGCCGTCGTTGGTGCCCGCTTGGTAACCGGA
AGAGAACACTCGCAGGCTGTGAGCTGGATTGTAGATGTTGGCTCCGACTT
CCCTCCAGATGTTCTCGATCTGCTCAAGTCGTGGGATACCAACTGCGTAT
TCCGAGAGGATCAAAGTCGTTTGACCACCAGAGCCTGGAATGGTTACGGT
CCAAATGAGAAGCGAGGTCGGTGTCTATTCTTATCATCTGCGACTACAAC
GACCCCAATACTAACCCCTGTCGCAGACTTCAAATACCTGACTCCGAAGT
TGCGCTTGGAACCAGAAATGCTGTCTGATTCTCAGGTGTTCTCCAAGACT
TTCCACATGGTCTGCTCCTCCTCTCGTTGTATTTCAATCGTGCAAACGAT
CTTGCGCAGACGGGAGGAGCTACAGCGAGCAGGCAAAGCTCCCCCAGTGA
AGCACGCGGCGCAAAGACCTATTTTTGTTTGGGAACCTGTGCCGGATCTA
TGCACGCCAGAGGAGCAAGAGCGGTTCCTTGCTGCGAACCAAGTAGTAGA
CGTTGTGAGCCCCAACGAACTGGAACTCGGAATGATGTTTGGCCAGCCTG
GTTGGAGCGAGGAGACCGACTATGGGAAAAACATCGTCAAGAAGATCCTT
GAGTCAGGTATTGGTCCTGATGGGAACGGGCATTTGGTTATCAGAGCCGG
CAAAGACGGCAGCTACTCTTACTCTAGATCCCAGAGGGTCTGGCTGCCCG
CCTACCATCAGCCCAGTGCTTCAGGGGCGTCAGCGGTGATTGACCCCACT
GGCGCGGGCAATTCTTTTCTGGGTGCCCTGACACAAGGCATGGTCAGTGC
AGGCAGAGAACCGGCCAACCTTGTCGACTCGGTCCTCGCAGGGTCTACGG
CATGGCAGGAAGCAATCCAAGCTGCTGCACAGCATAGCCAAGTCTTGACG
GCCTTGATTTTTGCTACTGTGGCGGCCAGCTTCGTGGTTGAGCAGATTGG
AGTGCCTCGCATGTCTACATCCAGTGATGGGAAGGAGCTTTGGAACGAGA
CTGAGTTCACGGAACGGGTCCGTCTGTACACACAGCGCTTGTATCGAACA
TTGGAAGAGTCTCCTCAGAAGCACTTTCAGATCAACTGA
back to top

Coding sequence (CDS) from alignment at ch8:3017722..3019110-

>KJC3_012251-T1 ID=KJC3_012251-T1|Name=KJC3_012251-T1|organism=Aspergillus niger KJC3|type=CDS|length=3600bp|location=Sequence derived from alignment at ch8:3017722..3019110- (Aspergillus niger KJC3)
ACTTCAAATACCTGACTCCGAAGTTGCGCTTGGAACCAGAAATGCTGTCT
GATTCTCAGGTGTTCTCCAAGACTTTCCACATGGTCTGCTCCTCCTCTCG
TTGTATTTCAATCGTGCAAACGATCTTGCGCAGACGGGAGGAGCTACAGC
GAGCAGGCAAAGCTCCCCCAGTGAAGCACGCGGCGCAAAGACCTATTTTT
GTTTGGGAACCTGTGCCGGATCTATGCACGCCAGAGGAGCAAGAGCGGTT
CCTTGCTGCGAACCAAGTAGTAGACGTTGTGAGCCCCAACGAACTGGAAC
TCGGAATGATGTTTGGCCAGCCTGGTTGGAGCGAGGAGACCGACTATGGG
AAAAACATCGTCAAGAAGATCCTTGAGTCAGGTATTGGTCCTGATGGGAA
CGGGCATTTGGTTATCAGAGCCGGCAAAGACGGCAGCTACTCTTACTCTA
GATCCCAGAGGGTCTGGCTGCCCGCCTACCATCAGCCCAGTGCTTCAGGG
GCGTCAGCGGTGATTGACCCCACTGGCGCGGGCAATTCTTTTCTGGGTGC
CCTGACACAAGGCATGGTCAGTGCAGGCAGAGAACCGGCCAACCTTGTCG
ACTCGGTCCTCGCAGGGTCTACGGCATGGCAGGAAGCAATCCAAGCTGCT
GCACAGCATAGCCAAGTCTTGACGGCCTTGATTTTTGCTACTGTGGCGGC
CAGCTTCGTGGTTGAGCAGATTGGAGTGCCTCGCATGTCTACATCCAGTG
ATGGGAAGGAGCTTTGGAACGAGACTGAGTTCACGGAACGGGTCCGTCTG
TACACACAGCGCTTGTATCGAACATTGGAAGAGTCTCCTCAGAAGCACTT
TCAGATCAACTGAACGATATAGACTTCGATGGAACAAGACCCAATGTAAA
GAACGTTCTAGGAGGCGCTGCGTCATTTGCCGTCGTTGGTGCCCGCTTGG
TAACCGGAAGAGAACACTCGCAGGCTGTGAGCTGGATTGTAGATGTTGGC
TCCGACTTCCCTCCAGATGTTCTCGATCTGCTCAAGTCGTGGGATACCAA
CTGCGTATTCCGAGAGGATCAAAGTCGTTTGACCACCAGAGCCTGGAATG
GTTACGGTCCAAATGAGAAGCGAGATGTTGGAAGGCCATAGCTCTTCGGA
GCACTCTAGAAACAATGTGGACTTCTGCACAATGGGCATGTTCATTCTTG
ACTTCAAATACCTGACTCCGAAGTTGCGCTTGGAACCAGAAATGCTGTCT
GATTCTCAGGTGTTCTCCAAGACTTTCCACATGGTCTGCTCCTCCTCTCG
TTGTATTTCAATCGTGCAAACGATCTTGCGCAGACGGGAGGAGCTACAGC
GAGCAGGCAAAGCTCCCCCAGTGAAGCACGCGGCGCAAAGACCTATTTTT
GTTTGGGAACCTGTGCCGGATCTATGCACGCCAGAGGAGCAAGAGCGGTT
CCTTGCTGCGAACCAAGTAGTAGACGTTGTGAGCCCCAACGAACTGGAAC
TCGGAATGATGTTTGGCCAGCCTGGTTGGAGCGAGGAGACCGACTATGGG
AAAAACATCGTCAAGAAGATCCTTGAGTCAGGTATTGGTCCTGATGGGAA
CGGGCATTTGGTTATCAGAGCCGGCAAAGACGGCAGCTACTCTTACTCTA
GATCCCAGAGGGTCTGGCTGCCCGCCTACCATCAGCCCAGTGCTTCAGGG
GCGTCAGCGGTGATTGACCCCACTGGCGCGGGCAATTCTTTTCTGGGTGC
CCTGACACAAGGCATGGTCAGTGCAGGCAGAGAACCGGCCAACCTTGTCG
ACTCGGTCCTCGCAGGGTCTACGGCATGGCAGGAAGCAATCCAAGCTGCT
GCACAGCATAGCCAAGTCTTGACGGCCTTGATTTTTGCTACTGTGGCGGC
CAGCTTCGTGGTTGAGCAGATTGGAGTGCCTCGCATGTCTACATCCAGTG
ATGGGAAGGAGCTTTGGAACGAGACTGAGTTCACGGAACGGGTCCGTCTG
TACACACAGCGCTTGTATCGAACATTGGAAGAGTCTCCTCAGAAGCACTT
TCAGATCAACTGAACGATATAGACTTCGATGGAACAAGACCCAATGTAAA
GAACGTTCTAGGAGGCGCTGCGTCATTTGCCGTCGTTGGTGCCCGCTTGG
TAACCGGAAGAGAACACTCGCAGGCTGTGAGCTGGATTGTAGATGTTGGC
TCCGACTTCCCTCCAGATGTTCTCGATCTGCTCAAGTCGTGGGATACCAA
CTGCGTATTCCGAGAGGATCAAAGTCGTTTGACCACCAGAGCCTGGAATG
GTTACGGTCCAAATGAGAAGCGAGATGTTGGAAGGCCATAGCTCTTCGGA
GCACTCTAGAAACAATGTGGACTTCTGCACAATGGGCATGTTCATTCTTG
ACTTCAAATACCTGACTCCGAAGTTGCGCTTGGAACCAGAAATGCTGTCT
GATTCTCAGGTGTTCTCCAAGACTTTCCACATGGTCTGCTCCTCCTCTCG
TTGTATTTCAATCGTGCAAACGATCTTGCGCAGACGGGAGGAGCTACAGC
GAGCAGGCAAAGCTCCCCCAGTGAAGCACGCGGCGCAAAGACCTATTTTT
GTTTGGGAACCTGTGCCGGATCTATGCACGCCAGAGGAGCAAGAGCGGTT
CCTTGCTGCGAACCAAGTAGTAGACGTTGTGAGCCCCAACGAACTGGAAC
TCGGAATGATGTTTGGCCAGCCTGGTTGGAGCGAGGAGACCGACTATGGG
AAAAACATCGTCAAGAAGATCCTTGAGTCAGGTATTGGTCCTGATGGGAA
CGGGCATTTGGTTATCAGAGCCGGCAAAGACGGCAGCTACTCTTACTCTA
GATCCCAGAGGGTCTGGCTGCCCGCCTACCATCAGCCCAGTGCTTCAGGG
GCGTCAGCGGTGATTGACCCCACTGGCGCGGGCAATTCTTTTCTGGGTGC
CCTGACACAAGGCATGGTCAGTGCAGGCAGAGAACCGGCCAACCTTGTCG
ACTCGGTCCTCGCAGGGTCTACGGCATGGCAGGAAGCAATCCAAGCTGCT
GCACAGCATAGCCAAGTCTTGACGGCCTTGATTTTTGCTACTGTGGCGGC
CAGCTTCGTGGTTGAGCAGATTGGAGTGCCTCGCATGTCTACATCCAGTG
ATGGGAAGGAGCTTTGGAACGAGACTGAGTTCACGGAACGGGTCCGTCTG
TACACACAGCGCTTGTATCGAACATTGGAAGAGTCTCCTCAGAAGCACTT
TCAGATCAACTGAACGATATAGACTTCGATGGAACAAGACCCAATGTAAA
GAACGTTCTAGGAGGCGCTGCGTCATTTGCCGTCGTTGGTGCCCGCTTGG
TAACCGGAAGAGAACACTCGCAGGCTGTGAGCTGGATTGTAGATGTTGGC
TCCGACTTCCCTCCAGATGTTCTCGATCTGCTCAAGTCGTGGGATACCAA
CTGCGTATTCCGAGAGGATCAAAGTCGTTTGACCACCAGAGCCTGGAATG
GTTACGGTCCAAATGAGAAGCGAGATGTTGGAAGGCCATAGCTCTTCGGA
GCACTCTAGAAACAATGTGGACTTCTGCACAATGGGCATGTTCATTCTTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012251KJC3_012251Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012251-T1KJC3_012251-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012251-T1.cdsKJC3_012251-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012251-T1.exon3KJC3_012251-T1.exon3Aspergillus niger KJC3exon
KJC3_012251-T1.exon2KJC3_012251-T1.exon2Aspergillus niger KJC3exon
KJC3_012251-T1.exon1KJC3_012251-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012251-T1.utr5p1KJC3_012251-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR034094
DBxrefInterPro:IPR029056
DBxrefInterPro:IPR011611
DBxrefPFAM:PF00294
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3017722..3019110 -
Powered by Drupal