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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3019502..3021329+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012252-T1 ID=KJC3_012252-T1|Name=KJC3_012252-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1828bp|location=Sequence derived from alignment at ch8:3019502..3021329+ (Aspergillus niger KJC3)
ATGGCGACAGGAAGCCACATGCATAATCTTACCACCCTTATCAAGCGGTA
AGTCTTGAAACAGATGCGCTCGAGACTATAGCGCTATGCTCTCTTCTATT
CTTTTATACATTCCTTTATCACCACTATGTGTTCCCGATTACATGTGTTT
CTAACCAGCTGGAAATGCCAACAGGTTGGAAGCCGCAACCTCCCGCTTGG
AGGATATGGCTATGTCACTGGATGACCCCAACTCGCCCAAGACCATAGCT
CCCCCTGCTGTGCCTGAAGCAGCTACTCCCGAGCCCCCCAAACCAGCCGC
TGCTGCGGCTCCCGCACCGCCCCCCATCCCGCCGCAAATCCAGGACTTCG
ACACCCTGATCAACGAGGATGTCCGGAACTTTGTGGAGTTGGGCCAGAAG
ATCAATGGCTTGGTCGGAGAACAGGTAGGAAGAGAAGCGCATGTCAAGCC
GAGTGCGTCGCTTACAATTCCCCGCAGTCCAAGGTAGTCCTTCAAGCCTT
CGAAGCCGAGCGTACCTACCTCCTCGTGGCCACGAAAGCTAGAAAGCCCG
AGCAGCAGCCCCCGGAGCTCATGACGGGCCTTCACAATGCTTCAGACAGC
ATCAACAACATTCGGGAGTCGAACAGAGCTTCTCCTCTCTTCAACCACTT
CAGTGCGGTTGCGGAGGGTATTGTTGCCCTGGGATGGTTCTTCGCGGACA
AGCCCGCCGATTTCGTCACTGAGATGGCTGGAGGTGTCGAATACTACGGA
AACAAGGTCCTGAAGGAATACAAGGAGAAGTGCGCAACCTAACTATCCTC
TGTAGTCCCCAATGGGAGCTGACCCATGTTGCAGGGACCGTACCCACGTC
CAGTACATCCAGGCCTACTACCAGATCTACAAGTCTCTCGCTGCATACCT
GAAGAAGCACTACCCGAAGGGCCTGACCTGGAACGACAAGGATGGAATCG
ACGCCCAAGAAGCTCTTAGGCAGGTCAAGGCTGGTGGCTCTGGCCCTGCT
GCTGGCGATGCTGCTCCTCCTCCCCCGCCACCCCCTCCAGTTCCGACTCT
GAACGTTCCTGGTGGTGTTCCTCCCCCTCCTCCCCCGCCGCCCGGCGTCC
CTCCTCCGCCTGCAGCAGCCCCAGCTGCACCAGACATGTCAGCTGTCTTC
GACCAGCTGAACCAAGGCGAATCCGTCACCGCCGGCCTCCGGAAGGTCGA
CAAATCGCAGATGACGCACAAGAACCCGAACCTTCGCGCCAGCTCCATGG
TTCCCGATAGTCCAACCTCCGCAGGCAGCGCCGTTCGGGGCAAGTCGCCT
GCTCCGAGCAAGAAACCCAAGCCGGAGAGCATGCGCGCCCGGAAGCCCCC
GCGCAAGGACCTGGAAGGCAACAAATGGTTCATCGAGAACTTCGAGAACC
CCGGCGAGATCGTTGAGATCAACGCGCAGCAGAACCACTCCATCCTCATC
TCGCGGTGCAACAAGACCATCATCAAGATCAACAACAAGGCCAACGCCAT
CTCCATCGACAACTGCACCGGCCTCTCCATCATCGTCGACTCCCTGGTCA
GCAGCCTTGACGTCATCAAGTCCCCCAAGTTCGCCCTCCAAATAGACGGC
GTCGTCCCCACCCTCCTCCTGGACCAGGTCGATGGTGCCACTGTCTACCT
GGGCCAGCAGAGCCTGGCCACCGAGGTCTTCTCCAGCAAGTGCACTGCAG
TCAACATCATGCTTCCTCCCAAGGAGGGAACCGACGAGGATACCAAGGAA
TGCCCTATCCCTGAGCAGATCAAGACGTACGTGAAGAACGGCGTTCTCGT
TAACGAGATTGTCGAGCACGCTGGCTAG back to topCoding sequence (CDS) from alignment at ch8:3019502..3021329+ >KJC3_012252-T1 ID=KJC3_012252-T1|Name=KJC3_012252-T1|organism=Aspergillus niger KJC3|type=CDS|length=6372bp|location=Sequence derived from alignment at ch8:3019502..3021329+ (Aspergillus niger KJC3)
ATGGCGACAGGAAGCCACATGCATAATCTTACCACCCTTATCAAGCGGTT
GGAAGCCGCAACCTCCCGCTTGGAGGATATGGCTATGTCACTGGATGACC
CCAACTCGCCCAAGACCATAGCTCCCCCTGCTGTGCCTGAAGCAGCTACT
CCCGAGCCCCCCAAACCAGCCGCTGCTGCGGCTCCCGCACCGCCCCCCAT
CCCGCCGCAAATCCAGGACTTCGACACCCTGATCAACGAGGATGTCCGGA
ACTTTGTGGAGTTGGGCCAGAAGATCAATGGCTTGGTCGGAGAACAGTCC
AAGGTAGTCCTTCAAGCCTTCGAAGCCGAGCGTACCTACCTCCTCGTGGC
CACGAAAGCTAGAAAGCCCGAGCAGCAGCCCCCGGAGCTCATGACGGGCC
TTCACAATGCTTCAGACAGCATCAACAACATTCGGGAGTCGAACAGAGCT
TCTCCTCTCTTCAACCACTTCAGTGCGGTTGCGGAGGGTATTGTTGCCCT
GGGATGGTTCTTCGCGGACAAGCCCGCCGATTTCGTCACTGAGATGGCTG
GAGGTGTCGAATACTACGGAAACAAGGTCCTGAAGGAATACAAGGAGAAG
GACCGTACCCACGTCCAGTACATCCAGGCCTACTACCAGATCTACAAGTC
TCTCGCTGCATACCTGAAGAAGCACTACCCGAAGGGCCTGACCTGGAACG
ACAAGGATGGAATCGACGCCCAAGAAGCTCTTAGGCAGGTCAAGGCTGGT
GGCTCTGGCCCTGCTGCTGGCGATGCTGCTCCTCCTCCCCCGCCACCCCC
TCCAGTTCCGACTCTGAACGTTCCTGGTGGTGTTCCTCCCCCTCCTCCCC
CGCCGCCCGGCGTCCCTCCTCCGCCTGCAGCAGCCCCAGCTGCACCAGAC
ATGTCAGCTGTCTTCGACCAGCTGAACCAAGGCGAATCCGTCACCGCCGG
CCTCCGGAAGGTCGACAAATCGCAGATGACGCACAAGAACCCGAACCTTC
GCGCCAGCTCCATGGTTCCCGATAGTCCAACCTCCGCAGGCAGCGCCGTT
CGGGGCAAGTCGCCTGCTCCGAGCAAGAAACCCAAGCCGGAGAGCATGCG
CGCCCGGAAGCCCCCGCGCAAGGACCTGGAAGGCAACAAATGGTTCATCG
AGAACTTCGAGAACCCCGGCGAGATCGTTGAGATCAACGCGCAGCAGAAC
CACTCCATCCTCATCTCGCGGTGCAACAAGACCATCATCAAGATCAACAA
CAAGGCCAACGCCATCTCCATCGACAACTGCACCGGCCTCTCCATCATCG
TCGACTCCCTGGTCAGCAGCCTTGACGTCATCAAGTCCCCCAAGTTCGCC
CTCCAAATAGACGGCGTCGTCCCCACCCTCCTCCTGGACCAGGTCGATGG
TGCCACTGTCTACCTGGGCCAGCAGAGCCTGGCCACCGAGGTCTTCTCCA
GCAAGTGCACTGCAGTCAACATCATGCTTCCTCCCAAGGAGGGAACCGAC
GAGGATACCAAGGAATGCCCTATCCCTGAGCAGATCAAGACGTACGTGAA
GAACGGCGTTCTCGTTAACGAGATTGTCGAGCACGCTGGCTAGATGGCGA
CAGGAAGCCACATGCATAATCTTACCACCCTTATCAAGCGGTTGGAAGCC
GCAACCTCCCGCTTGGAGGATATGGCTATGTCACTGGATGACCCCAACTC
GCCCAAGACCATAGCTCCCCCTGCTGTGCCTGAAGCAGCTACTCCCGAGC
CCCCCAAACCAGCCGCTGCTGCGGCTCCCGCACCGCCCCCCATCCCGCCG
CAAATCCAGGACTTCGACACCCTGATCAACGAGGATGTCCGGAACTTTGT
GGAGTTGGGCCAGAAGATCAATGGCTTGGTCGGAGAACAGTCCAAGGTAG
TCCTTCAAGCCTTCGAAGCCGAGCGTACCTACCTCCTCGTGGCCACGAAA
GCTAGAAAGCCCGAGCAGCAGCCCCCGGAGCTCATGACGGGCCTTCACAA
TGCTTCAGACAGCATCAACAACATTCGGGAGTCGAACAGAGCTTCTCCTC
TCTTCAACCACTTCAGTGCGGTTGCGGAGGGTATTGTTGCCCTGGGATGG
TTCTTCGCGGACAAGCCCGCCGATTTCGTCACTGAGATGGCTGGAGGTGT
CGAATACTACGGAAACAAGGTCCTGAAGGAATACAAGGAGAAGGACCGTA
CCCACGTCCAGTACATCCAGGCCTACTACCAGATCTACAAGTCTCTCGCT
GCATACCTGAAGAAGCACTACCCGAAGGGCCTGACCTGGAACGACAAGGA
TGGAATCGACGCCCAAGAAGCTCTTAGGCAGGTCAAGGCTGGTGGCTCTG
GCCCTGCTGCTGGCGATGCTGCTCCTCCTCCCCCGCCACCCCCTCCAGTT
CCGACTCTGAACGTTCCTGGTGGTGTTCCTCCCCCTCCTCCCCCGCCGCC
CGGCGTCCCTCCTCCGCCTGCAGCAGCCCCAGCTGCACCAGACATGTCAG
CTGTCTTCGACCAGCTGAACCAAGGCGAATCCGTCACCGCCGGCCTCCGG
AAGGTCGACAAATCGCAGATGACGCACAAGAACCCGAACCTTCGCGCCAG
CTCCATGGTTCCCGATAGTCCAACCTCCGCAGGCAGCGCCGTTCGGGGCA
AGTCGCCTGCTCCGAGCAAGAAACCCAAGCCGGAGAGCATGCGCGCCCGG
AAGCCCCCGCGCAAGGACCTGGAAGGCAACAAATGGTTCATCGAGAACTT
CGAGAACCCCGGCGAGATCGTTGAGATCAACGCGCAGCAGAACCACTCCA
TCCTCATCTCGCGGTGCAACAAGACCATCATCAAGATCAACAACAAGGCC
AACGCCATCTCCATCGACAACTGCACCGGCCTCTCCATCATCGTCGACTC
CCTGGTCAGCAGCCTTGACGTCATCAAGTCCCCCAAGTTCGCCCTCCAAA
TAGACGGCGTCGTCCCCACCCTCCTCCTGGACCAGGTCGATGGTGCCACT
GTCTACCTGGGCCAGCAGAGCCTGGCCACCGAGGTCTTCTCCAGCAAGTG
CACTGCAGTCAACATCATGCTTCCTCCCAAGGAGGGAACCGACGAGGATA
CCAAGGAATGCCCTATCCCTGAGCAGATCAAGACGTACGTGAAGAACGGC
GTTCTCGTTAACGAGATTGTCGAGCACGCTGGCTAGATGGCGACAGGAAG
CCACATGCATAATCTTACCACCCTTATCAAGCGGTTGGAAGCCGCAACCT
CCCGCTTGGAGGATATGGCTATGTCACTGGATGACCCCAACTCGCCCAAG
ACCATAGCTCCCCCTGCTGTGCCTGAAGCAGCTACTCCCGAGCCCCCCAA
ACCAGCCGCTGCTGCGGCTCCCGCACCGCCCCCCATCCCGCCGCAAATCC
AGGACTTCGACACCCTGATCAACGAGGATGTCCGGAACTTTGTGGAGTTG
GGCCAGAAGATCAATGGCTTGGTCGGAGAACAGTCCAAGGTAGTCCTTCA
AGCCTTCGAAGCCGAGCGTACCTACCTCCTCGTGGCCACGAAAGCTAGAA
AGCCCGAGCAGCAGCCCCCGGAGCTCATGACGGGCCTTCACAATGCTTCA
GACAGCATCAACAACATTCGGGAGTCGAACAGAGCTTCTCCTCTCTTCAA
CCACTTCAGTGCGGTTGCGGAGGGTATTGTTGCCCTGGGATGGTTCTTCG
CGGACAAGCCCGCCGATTTCGTCACTGAGATGGCTGGAGGTGTCGAATAC
TACGGAAACAAGGTCCTGAAGGAATACAAGGAGAAGGACCGTACCCACGT
CCAGTACATCCAGGCCTACTACCAGATCTACAAGTCTCTCGCTGCATACC
TGAAGAAGCACTACCCGAAGGGCCTGACCTGGAACGACAAGGATGGAATC
GACGCCCAAGAAGCTCTTAGGCAGGTCAAGGCTGGTGGCTCTGGCCCTGC
TGCTGGCGATGCTGCTCCTCCTCCCCCGCCACCCCCTCCAGTTCCGACTC
TGAACGTTCCTGGTGGTGTTCCTCCCCCTCCTCCCCCGCCGCCCGGCGTC
CCTCCTCCGCCTGCAGCAGCCCCAGCTGCACCAGACATGTCAGCTGTCTT
CGACCAGCTGAACCAAGGCGAATCCGTCACCGCCGGCCTCCGGAAGGTCG
ACAAATCGCAGATGACGCACAAGAACCCGAACCTTCGCGCCAGCTCCATG
GTTCCCGATAGTCCAACCTCCGCAGGCAGCGCCGTTCGGGGCAAGTCGCC
TGCTCCGAGCAAGAAACCCAAGCCGGAGAGCATGCGCGCCCGGAAGCCCC
CGCGCAAGGACCTGGAAGGCAACAAATGGTTCATCGAGAACTTCGAGAAC
CCCGGCGAGATCGTTGAGATCAACGCGCAGCAGAACCACTCCATCCTCAT
CTCGCGGTGCAACAAGACCATCATCAAGATCAACAACAAGGCCAACGCCA
TCTCCATCGACAACTGCACCGGCCTCTCCATCATCGTCGACTCCCTGGTC
AGCAGCCTTGACGTCATCAAGTCCCCCAAGTTCGCCCTCCAAATAGACGG
CGTCGTCCCCACCCTCCTCCTGGACCAGGTCGATGGTGCCACTGTCTACC
TGGGCCAGCAGAGCCTGGCCACCGAGGTCTTCTCCAGCAAGTGCACTGCA
GTCAACATCATGCTTCCTCCCAAGGAGGGAACCGACGAGGATACCAAGGA
ATGCCCTATCCCTGAGCAGATCAAGACGTACGTGAAGAACGGCGTTCTCG
TTAACGAGATTGTCGAGCACGCTGGCTAGATGGCGACAGGAAGCCACATG
CATAATCTTACCACCCTTATCAAGCGGTTGGAAGCCGCAACCTCCCGCTT
GGAGGATATGGCTATGTCACTGGATGACCCCAACTCGCCCAAGACCATAG
CTCCCCCTGCTGTGCCTGAAGCAGCTACTCCCGAGCCCCCCAAACCAGCC
GCTGCTGCGGCTCCCGCACCGCCCCCCATCCCGCCGCAAATCCAGGACTT
CGACACCCTGATCAACGAGGATGTCCGGAACTTTGTGGAGTTGGGCCAGA
AGATCAATGGCTTGGTCGGAGAACAGTCCAAGGTAGTCCTTCAAGCCTTC
GAAGCCGAGCGTACCTACCTCCTCGTGGCCACGAAAGCTAGAAAGCCCGA
GCAGCAGCCCCCGGAGCTCATGACGGGCCTTCACAATGCTTCAGACAGCA
TCAACAACATTCGGGAGTCGAACAGAGCTTCTCCTCTCTTCAACCACTTC
AGTGCGGTTGCGGAGGGTATTGTTGCCCTGGGATGGTTCTTCGCGGACAA
GCCCGCCGATTTCGTCACTGAGATGGCTGGAGGTGTCGAATACTACGGAA
ACAAGGTCCTGAAGGAATACAAGGAGAAGGACCGTACCCACGTCCAGTAC
ATCCAGGCCTACTACCAGATCTACAAGTCTCTCGCTGCATACCTGAAGAA
GCACTACCCGAAGGGCCTGACCTGGAACGACAAGGATGGAATCGACGCCC
AAGAAGCTCTTAGGCAGGTCAAGGCTGGTGGCTCTGGCCCTGCTGCTGGC
GATGCTGCTCCTCCTCCCCCGCCACCCCCTCCAGTTCCGACTCTGAACGT
TCCTGGTGGTGTTCCTCCCCCTCCTCCCCCGCCGCCCGGCGTCCCTCCTC
CGCCTGCAGCAGCCCCAGCTGCACCAGACATGTCAGCTGTCTTCGACCAG
CTGAACCAAGGCGAATCCGTCACCGCCGGCCTCCGGAAGGTCGACAAATC
GCAGATGACGCACAAGAACCCGAACCTTCGCGCCAGCTCCATGGTTCCCG
ATAGTCCAACCTCCGCAGGCAGCGCCGTTCGGGGCAAGTCGCCTGCTCCG
AGCAAGAAACCCAAGCCGGAGAGCATGCGCGCCCGGAAGCCCCCGCGCAA
GGACCTGGAAGGCAACAAATGGTTCATCGAGAACTTCGAGAACCCCGGCG
AGATCGTTGAGATCAACGCGCAGCAGAACCACTCCATCCTCATCTCGCGG
TGCAACAAGACCATCATCAAGATCAACAACAAGGCCAACGCCATCTCCAT
CGACAACTGCACCGGCCTCTCCATCATCGTCGACTCCCTGGTCAGCAGCC
TTGACGTCATCAAGTCCCCCAAGTTCGCCCTCCAAATAGACGGCGTCGTC
CCCACCCTCCTCCTGGACCAGGTCGATGGTGCCACTGTCTACCTGGGCCA
GCAGAGCCTGGCCACCGAGGTCTTCTCCAGCAAGTGCACTGCAGTCAACA
TCATGCTTCCTCCCAAGGAGGGAACCGACGAGGATACCAAGGAATGCCCT
ATCCCTGAGCAGATCAAGACGTACGTGAAGAACGGCGTTCTCGTTAACGA
GATTGTCGAGCACGCTGGCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000902 | cell morphogenesis |
| GO:0007010 | cytoskeleton organization |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003779 | actin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262KZ3 |
| DBxref | InterPro:IPR036223 |
| DBxref | InterPro:IPR017901 |
| DBxref | InterPro:IPR018106 |
| DBxref | InterPro:IPR016098 |
| DBxref | InterPro:IPR013912 |
| DBxref | InterPro:IPR036222 |
| DBxref | InterPro:IPR013992 |
| DBxref | InterPro:IPR006599 |
| DBxref | PFAM:PF01213 |
| DBxref | PFAM:PF08603 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3019502..3021329 + |
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