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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3026644..3030146- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012255-T1 ID=KJC3_012255-T1|Name=KJC3_012255-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3503bp|location=Sequence derived from alignment at ch8:3026644..3030146- (Aspergillus niger KJC3)
CCCAAACGTTCCCTCCGAACTGCCTGTCCTGGCTGTGCCTATCCTTTTCT
ATAGTTAACACCCTAATTTTGAACCCACCCCCCATCTTCCCCACCCTTGC
TGCTGCGCATTTTCCTGCATGTGGCCTCCCTAATCCCTCCCCTCCGTGCT
TAATCGCTCTCCCCATAATAACAACCTCCGTTATCGCCGATTTCCCAGAC
ACCCACCCAACCCCCCCAACATGGCTGACGTCGACGTGGCCAGTTACTAT
AACTTGCCCTCGGCTTTCCCCGAAGAATGGCCCGCTGAGCTGGATGAAAG
CGACCATTCCGAAGACGAAGCTTTAGAACGTCGCGGCTCGCGCTCGGAGA
AATCCCGATACTTTGCTCTGGAGCGCAACAATAGCACGCGGAAGGGGGTC
ACTTTAGGCTCCTTCAAAGCGAACAATGGTCGGGAGAACCTCGTGAAGAT
GGATGAGCCTGATCCCCTAGGAACGGGGGACAGTGTGCTTAAGATTCTCA
AAATGCGAGGCTTGTCTCTAGACGAGGAAAGCCGCCTGCGGAATCGTTTC
CTGCTCTCATCGACCTCCTTCTCCCCGGCGCTCTTCCTTTCCCAAGTCCA
TTCCGATGCGTCGATACGGTCCCTTCTCGAAGGTCTCAACATCCTCTCTC
AATCAATTGATCAGAAATCCGCGTCGCTGAAAGTCCTCGTCGAAGCGAAC
TTCGAACGATTCGTTCGAGCCAAAGCGACTATCGACAGTGTATATACGGA
AATGAGGAATCAGGGCAAGAAAGAGGAGTATTTGAGCCCTCATGCCAACC
GCCGGTCGGTTGGTCATTTGCGCAGCCTCTCGGGAAGCAAACAGAGTATA
GCCACGTCGGCCCTTTCCGATGTAGGTCCCGGCAAGAACGCTCTAACGAA
AGAGAGTGAATACGGCATGAAGGGTATTCGTGTTCCGTTGCTTGAGGCAT
CTGTCAAAGCAGAGGAGGTGTGGGGTCCGGCATTGGGAGGTCGCGAAAGA
GAGCAGGTGCTCAAGTCGGTCGTCGACACTATGGAAAAACATAGAGATAT
CTACGAAATAGGCGGTCATCTTTCCAAGTCCATTAAGCAGAGAGACTATG
ACTCTGTCTTTGAGCAGTACCGAAAAGCGAGGGCCCTCTCCAAGACTGCT
AGGGATATTGCCGATACCGCAACGAGCAAGGGTCAGCCATTGACGGACGA
AGAGGCTCATGTTATTCTGGCTATGGGGAGAATGTGGATCGATGTTGATT
CACAAATTCAGGCGTTCAAACGCGACCTGTGGAGGCGCCTCAGCGATGCG
CCTACTACCTCGACCACTGTTACTGCTACAGGTCCCGTAGAAGAGCACAT
GGAGCTCATCGGTGCTCTCCTAGAGCTAGGGGTCGAGGACAATCCTATCT
GGGTCTGGCTTCTCAGTCGCTACGACTTTTTGAAGAAGAAAATCACGGCC
TTCTGTGACCGTTGCAAGGTCGAGATAGAAATCCTGAGGCGTCGACTAGC
TAGTGGGGAGAAACCGACGCCTCAGGCGGTGGCATCATATCTGCGGTTGG
CACCACGCGACGGCGCTCTGGACACTCAAACCATGCGCGATAGCGACCAA
GTGATCGAGCTCTGGGAATGTATACATACCTATCTGAGCAGACTGTTGTC
CTCTGAAGGAGGTCTTCTTGGCGAGGTTTTCGATTTCTGGGAAGTAGCAC
AATCCTTCATCGACGGCAGCAGGCAAAAGCTTCTTCCCGCTGGGTTCGAG
GGAGAAAGTCGCAAACACCATCGGCTCTCTTCCAACGATGCTAGGGAGCT
GCAAAAGGGTGTCGTCGAGCTGCTCAATCTCATCCGCGAGAGCGTTCTCT
CACTGTTCGCCGACCCCCCTGTGGACGATGTATCCCTCCTCACCTCGCCC
ATCTCCACCGCCAGTCCTAGCAGCCCTGGGAGTCGGGGTGTGACCCCAAC
GGAATCGCGATTCAAGCTTGATCCGAAGAACATGCCCTTCCCTACACCGA
AGCGCGGGGAACATTGGGAAGATTATGCCTTCTGGCCACCATTTTCAAAT
TCTCTTAGCGGCATTCACTATCTCAGTCAGTGTCTAGTGCTCATTGGCAC
AGCGGCTAGCGAGATGGCCGCCTTGGAGCCTGTGATGCACAGTACTAACA
CCCGTGATCTTCTCAAATCCCTTGTGAGTGTAGCACGCGAACGCTCAGTA
CGTGTGGCATGCGCAGCTTGGGGAAAGGACGCCGAAATTTGTAAGATGCT
GGAAGACTGGACTCGGGACCCGGAGAAGAGAGATCTGACCAAGATGCCTG
GTCTATTTGTTGCCTTTGAGAACGCAATCATCGCGGGTATGCAGAAGATC
CTCTACATTCCGGAGGCCATGGCAAGATCTGGTTCTGTAGATGTTGTGAC
CCAGCCTCCTGCCAAACTACTACAGATGGTTCGCACTCAGTTTGTGTCTA
GCGTCTACAAAGCTCTGAGTGGCCTGGTTGAGAATGCGGAGCATCCTACA
TCGTCGGAAGATGAGGATGAATGGATCGCAGCCGGCTCCACGGCGACACG
AAACCAATTTGATACATCTCCATCGCTACTCATCGCGGATGCGGTCGATT
CTCGGAATAGAGTAAGTAGTTTGTCTTGTTTTTTTCTTTCTCGACACTCC
GATATGCTGGTAGTTCATTGGCTAATGCGTCTATAGAATGTGCGCATCCT
CTTGACTTTGTCGAACATCAAAGCATTCCAGGCCGATCTCGTCCCGCAGC
TGGTTGCCAACTTTGAGAACTCATTCTCGGTCCGGTTGACCGAGGAGGCC
AAGACCGTCCGCGATGTGCTCAACCAGATCGACGACCGATTGTTCCAGTC
ATACACTAAGCCGACGATCAATGCGTTGAACACGACAATTGTCAACAGCA
TCACTGCCCCCGACTGGGAACCGGCATCGGCCCGCCCGGATCAAGTCCGT
CCATACGTCTACACTACCATGCTGGACCTGGTGCTGGTACACACGGAGAT
CACCACTACCATCCCTTCAACGTTGACGGCTGTGCCGAGCCGCTCCTCAT
CCGCCGCGCAGTCTTCATTACTCTCCGTTGTTCTTACGTATTTGCTGACC
CAAGTGTCGACATCGCTTCTGAACGCCTTTAGTTCTCGGTCCTCGTACAG
TCTGCCAGCCCTCATGCAGGCCACACTGGATACCGAGTTCATCGCGCAGA
CCATGTCCCAGTTTTCGACCGATGAAGCATCCGCGATACAAAGTCAGATC
TATGTTGAGCTGGATCGGCGGACCACCCACGAGGCACGTGCGCGGCTTCA
GTCCGAGCTGGGGGAAATGAGAGGCATCCTAAAGCGCTTGAGAGAGAGGA
CCAAAGGAGAGTTTGCATGCTTCAGAAAGCCGCGGAATGGCAACGGGCAC
AAACCATCCGCCTAGATCGATCTTCATCTTCACGAAAGAAATCTACAAAT
CATCTTGACAGTAGTAGCTGCCCAATCCCTATAAAGAAGATCAAAAATCG
TAG back to topCoding sequence (CDS) from alignment at ch8:3026644..3030146- >KJC3_012255-T1 ID=KJC3_012255-T1|Name=KJC3_012255-T1|organism=Aspergillus niger KJC3|type=CDS|length=6240bp|location=Sequence derived from alignment at ch8:3026644..3030146- (Aspergillus niger KJC3)
AATGTGCGCATCCTCTTGACTTTGTCGAACATCAAAGCATTCCAGGCCGA
TCTCGTCCCGCAGCTGGTTGCCAACTTTGAGAACTCATTCTCGGTCCGGT
TGACCGAGGAGGCCAAGACCGTCCGCGATGTGCTCAACCAGATCGACGAC
CGATTGTTCCAGTCATACACTAAGCCGACGATCAATGCGTTGAACACGAC
AATTGTCAACAGCATCACTGCCCCCGACTGGGAACCGGCATCGGCCCGCC
CGGATCAAGTCCGTCCATACGTCTACACTACCATGCTGGACCTGGTGCTG
GTACACACGGAGATCACCACTACCATCCCTTCAACGTTGACGGCTGTGCC
GAGCCGCTCCTCATCCGCCGCGCAGTCTTCATTACTCTCCGTTGTTCTTA
CGTATTTGCTGACCCAAGTGTCGACATCGCTTCTGAACGCCTTTAGTTCT
CGGTCCTCGTACAGTCTGCCAGCCCTCATGCAGGCCACACTGGATACCGA
GTTCATCGCGCAGACCATGTCCCAGTTTTCGACCGATGAAGCATCCGCGA
TACAAAGTCAGATCTATGTTGAGCTGGATCGGCGGACCACCCACGAGGCA
CGTGCGCGGCTTCAGTCCGAGCTGGGGGAAATGAGAGGCATCCTAAAGCG
CTTGAGAGAGAGGACCAAAGGAGAGTTTGCATGCTTCAGAAAGCCGCGGA
ATGGCAACGGGCACAAACCATCCGCCTAGATGGCTGACGTCGACGTGGCC
AGTTACTATAACTTGCCCTCGGCTTTCCCCGAAGAATGGCCCGCTGAGCT
GGATGAAAGCGACCATTCCGAAGACGAAGCTTTAGAACGTCGCGGCTCGC
GCTCGGAGAAATCCCGATACTTTGCTCTGGAGCGCAACAATAGCACGCGG
AAGGGGGTCACTTTAGGCTCCTTCAAAGCGAACAATGGTCGGGAGAACCT
CGTGAAGATGGATGAGCCTGATCCCCTAGGAACGGGGGACAGTGTGCTTA
AGATTCTCAAAATGCGAGGCTTGTCTCTAGACGAGGAAAGCCGCCTGCGG
AATCGTTTCCTGCTCTCATCGACCTCCTTCTCCCCGGCGCTCTTCCTTTC
CCAAGTCCATTCCGATGCGTCGATACGGTCCCTTCTCGAAGGTCTCAACA
TCCTCTCTCAATCAATTGATCAGAAATCCGCGTCGCTGAAAGTCCTCGTC
GAAGCGAACTTCGAACGATTCGTTCGAGCCAAAGCGACTATCGACAGTGT
ATATACGGAAATGAGGAATCAGGGCAAGAAAGAGGAGTATTTGAGCCCTC
ATGCCAACCGCCGGTCGGTTGGTCATTTGCGCAGCCTCTCGGGAAGCAAA
CAGAGTATAGCCACGTCGGCCCTTTCCGATGTAGGTCCCGGCAAGAACGC
TCTAACGAAAGAGAGTGAATACGGCATGAAGGGTATTCGTGTTCCGTTGC
TTGAGGCATCTGTCAAAGCAGAGGAGGTGTGGGGTCCGGCATTGGGAGGT
CGCGAAAGAGAGCAGGTGCTCAAGTCGGTCGTCGACACTATGGAAAAACA
TAGAGATATCTACGAAATAGGCGGTCATCTTTCCAAGTCCATTAAGCAGA
GAGACTATGACTCTGTCTTTGAGCAGTACCGAAAAGCGAGGGCCCTCTCC
AAGACTGCTAGGGATATTGCCGATACCGCAACGAGCAAGGGTCAGCCATT
GACGGACGAAGAGGCTCATGTTATTCTGGCTATGGGGAGAATGTGGATCG
ATGTTGATTCACAAATTCAGGCGTTCAAACGCGACCTGTGGAGGCGCCTC
AGCGATGCGCCTACTACCTCGACCACTGTTACTGCTACAGGTCCCGTAGA
AGAGCACATGGAGCTCATCGGTGCTCTCCTAGAGCTAGGGGTCGAGGACA
ATCCTATCTGGGTCTGGCTTCTCAGTCGCTACGACTTTTTGAAGAAGAAA
ATCACGGCCTTCTGTGACCGTTGCAAGGTCGAGATAGAAATCCTGAGGCG
TCGACTAGCTAGTGGGGAGAAACCGACGCCTCAGGCGGTGGCATCATATC
TGCGGTTGGCACCACGCGACGGCGCTCTGGACACTCAAACCATGCGCGAT
AGCGACCAAGTGATCGAGCTCTGGGAATGTATACATACCTATCTGAGCAG
ACTGTTGTCCTCTGAAGGAGGTCTTCTTGGCGAGGTTTTCGATTTCTGGG
AAGTAGCACAATCCTTCATCGACGGCAGCAGGCAAAAGCTTCTTCCCGCT
GGGTTCGAGGGAGAAAGTCGCAAACACCATCGGCTCTCTTCCAACGATGC
TAGGGAGCTGCAAAAGGGTGTCGTCGAGCTGCTCAATCTCATCCGCGAGA
GCGTTCTCTCACTGTTCGCCGACCCCCCTGTGGACGATGTATCCCTCCTC
ACCTCGCCCATCTCCACCGCCAGTCCTAGCAGCCCTGGGAGTCGGGGTGT
GACCCCAACGGAATCGCGATTCAAGCTTGATCCGAAGAACATGCCCTTCC
CTACACCGAAGCGCGGGGAACATTGGGAAGATTATGCCTTCTGGCCACCA
TTTTCAAATTCTCTTAGCGGCATTCACTATCTCAGTCAGTGTCTAGTGCT
CATTGGCACAGCGGCTAGCGAGATGGCCGCCTTGGAGCCTGTGATGCACA
GTACTAACACCCGTGATCTTCTCAAATCCCTTGTGAGTGTAGCACGCGAA
CGCTCAGTACGTGTGGCATGCGCAGCTTGGGGAAAGGACGCCGAAATTTG
TAAGATGCTGGAAGACTGGACTCGGGACCCGGAGAAGAGAGATCTGACCA
AGATGCCTGGTCTATTTGTTGCCTTTGAGAACGCAATCATCGCGGGTATG
CAGAAGATCCTCTACATTCCGGAGGCCATGGCAAGATCTGGTTCTGTAGA
TGTTGTGACCCAGCCTCCTGCCAAACTACTACAGATGGTTCGCACTCAGT
TTGTGTCTAGCGTCTACAAAGCTCTGAGTGGCCTGGTTGAGAATGCGGAG
CATCCTACATCGTCGGAAGATGAGGATGAATGGATCGCAGCCGGCTCCAC
GGCGACACGAAACCAATTTGATACATCTCCATCGCTACTCATCGCGGATG
CGGTCGATTCTCGGAATAGAAATGTGCGCATCCTCTTGACTTTGTCGAAC
ATCAAAGCATTCCAGGCCGATCTCGTCCCGCAGCTGGTTGCCAACTTTGA
GAACTCATTCTCGGTCCGGTTGACCGAGGAGGCCAAGACCGTCCGCGATG
TGCTCAACCAGATCGACGACCGATTGTTCCAGTCATACACTAAGCCGACG
ATCAATGCGTTGAACACGACAATTGTCAACAGCATCACTGCCCCCGACTG
GGAACCGGCATCGGCCCGCCCGGATCAAGTCCGTCCATACGTCTACACTA
CCATGCTGGACCTGGTGCTGGTACACACGGAGATCACCACTACCATCCCT
TCAACGTTGACGGCTGTGCCGAGCCGCTCCTCATCCGCCGCGCAGTCTTC
ATTACTCTCCGTTGTTCTTACGTATTTGCTGACCCAAGTGTCGACATCGC
TTCTGAACGCCTTTAGTTCTCGGTCCTCGTACAGTCTGCCAGCCCTCATG
CAGGCCACACTGGATACCGAGTTCATCGCGCAGACCATGTCCCAGTTTTC
GACCGATGAAGCATCCGCGATACAAAGTCAGATCTATGTTGAGCTGGATC
GGCGGACCACCCACGAGGCACGTGCGCGGCTTCAGTCCGAGCTGGGGGAA
ATGAGAGGCATCCTAAAGCGCTTGAGAGAGAGGACCAAAGGAGAGTTTGC
ATGCTTCAGAAAGCCGCGGAATGGCAACGGGCACAAACCATCCGCCTAGA
TGGCTGACGTCGACGTGGCCAGTTACTATAACTTGCCCTCGGCTTTCCCC
GAAGAATGGCCCGCTGAGCTGGATGAAAGCGACCATTCCGAAGACGAAGC
TTTAGAACGTCGCGGCTCGCGCTCGGAGAAATCCCGATACTTTGCTCTGG
AGCGCAACAATAGCACGCGGAAGGGGGTCACTTTAGGCTCCTTCAAAGCG
AACAATGGTCGGGAGAACCTCGTGAAGATGGATGAGCCTGATCCCCTAGG
AACGGGGGACAGTGTGCTTAAGATTCTCAAAATGCGAGGCTTGTCTCTAG
ACGAGGAAAGCCGCCTGCGGAATCGTTTCCTGCTCTCATCGACCTCCTTC
TCCCCGGCGCTCTTCCTTTCCCAAGTCCATTCCGATGCGTCGATACGGTC
CCTTCTCGAAGGTCTCAACATCCTCTCTCAATCAATTGATCAGAAATCCG
CGTCGCTGAAAGTCCTCGTCGAAGCGAACTTCGAACGATTCGTTCGAGCC
AAAGCGACTATCGACAGTGTATATACGGAAATGAGGAATCAGGGCAAGAA
AGAGGAGTATTTGAGCCCTCATGCCAACCGCCGGTCGGTTGGTCATTTGC
GCAGCCTCTCGGGAAGCAAACAGAGTATAGCCACGTCGGCCCTTTCCGAT
GTAGGTCCCGGCAAGAACGCTCTAACGAAAGAGAGTGAATACGGCATGAA
GGGTATTCGTGTTCCGTTGCTTGAGGCATCTGTCAAAGCAGAGGAGGTGT
GGGGTCCGGCATTGGGAGGTCGCGAAAGAGAGCAGGTGCTCAAGTCGGTC
GTCGACACTATGGAAAAACATAGAGATATCTACGAAATAGGCGGTCATCT
TTCCAAGTCCATTAAGCAGAGAGACTATGACTCTGTCTTTGAGCAGTACC
GAAAAGCGAGGGCCCTCTCCAAGACTGCTAGGGATATTGCCGATACCGCA
ACGAGCAAGGGTCAGCCATTGACGGACGAAGAGGCTCATGTTATTCTGGC
TATGGGGAGAATGTGGATCGATGTTGATTCACAAATTCAGGCGTTCAAAC
GCGACCTGTGGAGGCGCCTCAGCGATGCGCCTACTACCTCGACCACTGTT
ACTGCTACAGGTCCCGTAGAAGAGCACATGGAGCTCATCGGTGCTCTCCT
AGAGCTAGGGGTCGAGGACAATCCTATCTGGGTCTGGCTTCTCAGTCGCT
ACGACTTTTTGAAGAAGAAAATCACGGCCTTCTGTGACCGTTGCAAGGTC
GAGATAGAAATCCTGAGGCGTCGACTAGCTAGTGGGGAGAAACCGACGCC
TCAGGCGGTGGCATCATATCTGCGGTTGGCACCACGCGACGGCGCTCTGG
ACACTCAAACCATGCGCGATAGCGACCAAGTGATCGAGCTCTGGGAATGT
ATACATACCTATCTGAGCAGACTGTTGTCCTCTGAAGGAGGTCTTCTTGG
CGAGGTTTTCGATTTCTGGGAAGTAGCACAATCCTTCATCGACGGCAGCA
GGCAAAAGCTTCTTCCCGCTGGGTTCGAGGGAGAAAGTCGCAAACACCAT
CGGCTCTCTTCCAACGATGCTAGGGAGCTGCAAAAGGGTGTCGTCGAGCT
GCTCAATCTCATCCGCGAGAGCGTTCTCTCACTGTTCGCCGACCCCCCTG
TGGACGATGTATCCCTCCTCACCTCGCCCATCTCCACCGCCAGTCCTAGC
AGCCCTGGGAGTCGGGGTGTGACCCCAACGGAATCGCGATTCAAGCTTGA
TCCGAAGAACATGCCCTTCCCTACACCGAAGCGCGGGGAACATTGGGAAG
ATTATGCCTTCTGGCCACCATTTTCAAATTCTCTTAGCGGCATTCACTAT
CTCAGTCAGTGTCTAGTGCTCATTGGCACAGCGGCTAGCGAGATGGCCGC
CTTGGAGCCTGTGATGCACAGTACTAACACCCGTGATCTTCTCAAATCCC
TTGTGAGTGTAGCACGCGAACGCTCAGTACGTGTGGCATGCGCAGCTTGG
GGAAAGGACGCCGAAATTTGTAAGATGCTGGAAGACTGGACTCGGGACCC
GGAGAAGAGAGATCTGACCAAGATGCCTGGTCTATTTGTTGCCTTTGAGA
ACGCAATCATCGCGGGTATGCAGAAGATCCTCTACATTCCGGAGGCCATG
GCAAGATCTGGTTCTGTAGATGTTGTGACCCAGCCTCCTGCCAAACTACT
ACAGATGGTTCGCACTCAGTTTGTGTCTAGCGTCTACAAAGCTCTGAGTG
GCCTGGTTGAGAATGCGGAGCATCCTACATCGTCGGAAGATGAGGATGAA
TGGATCGCAGCCGGCTCCACGGCGACACGAAACCAATTTGATACATCTCC
ATCGCTACTCATCGCGGATGCGGTCGATTCTCGGAATAGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012255-T1.utr3p1 | KJC3_012255-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012255-T1.utr5p1 | KJC3_012255-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR039481 |
| DBxref | PFAM:PF08700 |
| DBxref | PFAM:PF15469 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3026644..3030146 - |
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