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KJC3_012264-T1, KJC3_012264-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012264-T1
Unique NameKJC3_012264-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3051151..3052743-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012264-T1 ID=KJC3_012264-T1|Name=KJC3_012264-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1593bp|location=Sequence derived from alignment at ch8:3051151..3052743- (Aspergillus niger KJC3)
CTTTTATCCTCTGGACGGATCACAATCCCTCACTATGGAGCCATGGAATC
TACTCGTACCATCTCCGAGCTGAAGTCGTCCTTTATCAGGGCACAAGTCC
GAATTCTATCTGAAGGCCTCGAGCCAGCCGAGGACTGGCGAAACTACGCC
GCTGAGACCGAAGAGGATGATCTCAGTGATAAGGTGGTCGGTGATGTCCT
ACAAAAGTGTAAGTGCAAGCATCCAGAATTAAGTCTTCACTTTTACCAGC
CTGTAATTTCAGCACATGCTTGCTCACCCTGTACCGTGGTCAATAAGCAT
ATCATTCTTCAATTTGCGTATGTTTCTAATGAACCTATGGGACACCAGTA
AACGCCGCTTTGAAACAACACAGCCGCATCGTCTATTCCTCTCAAGCTGT
TCAGCATGTCGCTCAGCAAATTACCAGCCTATACTGGTCATCGGCGACCC
AGGCAATCCCCAACCCGGGATCTTTGTTAAAAGGAGTCGAGAGATCAGTG
GATCTATCCAGTCATCTGTGAGCCCTGGAATTCCGCTACTGGGAAATGGG
ATAGATCTAATATCGCAGGAATATCGCACAACTCCCGTTGGAGCTGGAAA
ACCAATCCGCGAGCGAAGCACAGCGGGCTAGGTCCGGGATACTCCTCGCA
CCGATCGCAGTTTCAGCTGGTTAATTGTGATACAGATACCAAGAACTACG
GGAGCGTCTGACGGATCTGGATCGTTTACGGCAACAGCGACAACGGCGCC
TAGATCAATTACGACAGTTGCAGCAATTACTGGAGCCGTTCCGGGAACCG
CAGAAAAACATCCAGCCTAATCTGGTGACGAGAGATGGCGAGCTAGTCCA
GGAGTTAGACAAGATGAGGATGCTGGTTGCGCGAGTTGGCGGTCGAGTCG
AGCAGGGAAAGAAGAAACTGGGCGCTCAGGAGCAAGACAAGCCGTATCTG
GGGTGCGACCAGAAACTAGATGCCTTATTGGACATGACGTGATGACAAAT
AAAGAGGAAGGGCCCGGCTAGAATGACTTCATGCATTGAATGGAATGGAA
GGATGCCCGAATACCTAAATCGCATGCCTTGCCTACATTTATGAGAGCGT
TGCGCCTCCGTACATAATAGCCTTGGAAGATTGAGAGTGCGGCATTGCCG
GCAAAGAGGTCGCACAGATGCATGGCAACCATTGCAGCTGGATAATCAAT
CAGTAGATCTCAATTTTCTTGAACTCTTCGCCGCGGGTCTCCTTGGGCAG
CTATAATTAGACGATTTCCCATGCAATTACCGGAACTTTGAGAAGTTGCA
AGGGGGGGACCAAGCGATTGACTGCGGCTGCAACGATCATAGCAAGTGCC
AGTGACAGACCAGAAGGAGGGAGAAGAACGAGAGCCAAACGGTTGTTTGG
GACTACAGAGTAGCAACAGCAGCAGCAGCAGCAGCAGCACTTGCTCTGTT
CCTTCTCTTTCACTGGCTCCCCCATTTTAATTTCCTACCCATCTATCGAT
TTCCCTTCCTCTTATTGTTCCTTCATTCACCACACTCTTTTTGTCCTTTT
TTTCCCCCTTTGGCATAACTCCCACAAGTTAGTTTACCTATTG
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Coding sequence (CDS) from alignment at ch8:3051151..3052743-

>KJC3_012264-T1 ID=KJC3_012264-T1|Name=KJC3_012264-T1|organism=Aspergillus niger KJC3|type=CDS|length=2820bp|location=Sequence derived from alignment at ch8:3051151..3052743- (Aspergillus niger KJC3)
ATACCAAGAACTACGGGAGCGTCTGACGGATCTGGATCGTTTACGGCAAC
AGCGACAACGGCGCCTAGATCAATTACGACAGTTGCAGCAATTACTGGAG
CCGTTCCGGGAACCGCAGAAAAACATCCAGCCTAATCTGGTGACGAGAGA
TGGCGAGCTAGTCCAGGAGTTAGACAAGATGAGGATGCTGGTTGCGCGAG
TTGGCGGTCGAGTCGAGCAGGGAAAGAAGAAACTGGGCGCTCAGGAGCAA
GACAAGCCGTATCTGGGGTGCGACCAGAAACTAGATGCCTTATTGGACAT
GACGTGAGAATATCGCACAACTCCCGTTGGAGCTGGAAAACCAATCCGCG
AGCGAAGCACAGCGGGCTAGTAAACGCCGCTTTGAAACAACACAGCCGCA
TCGTCTATTCCTCTCAAGCTGTTCAGCATGTCGCTCAGCAAATTACCAGC
CTATACTGGTCATCGGCGACCCAGGCAATCCCCAACCCGGGATCTTTGTT
AAAAGGAGTCGAGAGATCAGTGGATCTATCCAGTCATCTATGGAATCTAC
TCGTACCATCTCCGAGCTGAAGTCGTCCTTTATCAGGGCACAAGTCCGAA
TTCTATCTGAAGGCCTCGAGCCAGCCGAGGACTGGCGAAACTACGCCGCT
GAGACCGAAGAGGATGATCTCAGTGATAAGGTGGTCGGTGATGTCCTACA
AAAGTATACCAAGAACTACGGGAGCGTCTGACGGATCTGGATCGTTTACG
GCAACAGCGACAACGGCGCCTAGATCAATTACGACAGTTGCAGCAATTAC
TGGAGCCGTTCCGGGAACCGCAGAAAAACATCCAGCCTAATCTGGTGACG
AGAGATGGCGAGCTAGTCCAGGAGTTAGACAAGATGAGGATGCTGGTTGC
GCGAGTTGGCGGTCGAGTCGAGCAGGGAAAGAAGAAACTGGGCGCTCAGG
AGCAAGACAAGCCGTATCTGGGGTGCGACCAGAAACTAGATGCCTTATTG
GACATGACGTGAGAATATCGCACAACTCCCGTTGGAGCTGGAAAACCAAT
CCGCGAGCGAAGCACAGCGGGCTAGTAAACGCCGCTTTGAAACAACACAG
CCGCATCGTCTATTCCTCTCAAGCTGTTCAGCATGTCGCTCAGCAAATTA
CCAGCCTATACTGGTCATCGGCGACCCAGGCAATCCCCAACCCGGGATCT
TTGTTAAAAGGAGTCGAGAGATCAGTGGATCTATCCAGTCATCTATGGAA
TCTACTCGTACCATCTCCGAGCTGAAGTCGTCCTTTATCAGGGCACAAGT
CCGAATTCTATCTGAAGGCCTCGAGCCAGCCGAGGACTGGCGAAACTACG
CCGCTGAGACCGAAGAGGATGATCTCAGTGATAAGGTGGTCGGTGATGTC
CTACAAAAGTATACCAAGAACTACGGGAGCGTCTGACGGATCTGGATCGT
TTACGGCAACAGCGACAACGGCGCCTAGATCAATTACGACAGTTGCAGCA
ATTACTGGAGCCGTTCCGGGAACCGCAGAAAAACATCCAGCCTAATCTGG
TGACGAGAGATGGCGAGCTAGTCCAGGAGTTAGACAAGATGAGGATGCTG
GTTGCGCGAGTTGGCGGTCGAGTCGAGCAGGGAAAGAAGAAACTGGGCGC
TCAGGAGCAAGACAAGCCGTATCTGGGGTGCGACCAGAAACTAGATGCCT
TATTGGACATGACGTGAGAATATCGCACAACTCCCGTTGGAGCTGGAAAA
CCAATCCGCGAGCGAAGCACAGCGGGCTAGTAAACGCCGCTTTGAAACAA
CACAGCCGCATCGTCTATTCCTCTCAAGCTGTTCAGCATGTCGCTCAGCA
AATTACCAGCCTATACTGGTCATCGGCGACCCAGGCAATCCCCAACCCGG
GATCTTTGTTAAAAGGAGTCGAGAGATCAGTGGATCTATCCAGTCATCTA
TGGAATCTACTCGTACCATCTCCGAGCTGAAGTCGTCCTTTATCAGGGCA
CAAGTCCGAATTCTATCTGAAGGCCTCGAGCCAGCCGAGGACTGGCGAAA
CTACGCCGCTGAGACCGAAGAGGATGATCTCAGTGATAAGGTGGTCGGTG
ATGTCCTACAAAAGTATACCAAGAACTACGGGAGCGTCTGACGGATCTGG
ATCGTTTACGGCAACAGCGACAACGGCGCCTAGATCAATTACGACAGTTG
CAGCAATTACTGGAGCCGTTCCGGGAACCGCAGAAAAACATCCAGCCTAA
TCTGGTGACGAGAGATGGCGAGCTAGTCCAGGAGTTAGACAAGATGAGGA
TGCTGGTTGCGCGAGTTGGCGGTCGAGTCGAGCAGGGAAAGAAGAAACTG
GGCGCTCAGGAGCAAGACAAGCCGTATCTGGGGTGCGACCAGAAACTAGA
TGCCTTATTGGACATGACGTGAGAATATCGCACAACTCCCGTTGGAGCTG
GAAAACCAATCCGCGAGCGAAGCACAGCGGGCTAGTAAACGCCGCTTTGA
AACAACACAGCCGCATCGTCTATTCCTCTCAAGCTGTTCAGCATGTCGCT
CAGCAAATTACCAGCCTATACTGGTCATCGGCGACCCAGGCAATCCCCAA
CCCGGGATCTTTGTTAAAAGGAGTCGAGAGATCAGTGGATCTATCCAGTC
ATCTATGGAATCTACTCGTACCATCTCCGAGCTGAAGTCGTCCTTTATCA
GGGCACAAGTCCGAATTCTATCTGAAGGCCTCGAGCCAGCCGAGGACTGG
CGAAACTACGCCGCTGAGACCGAAGAGGATGATCTCAGTGATAAGGTGGT
CGGTGATGTCCTACAAAAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031511Mis6-Sim4 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012264KJC3_012264Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012264-T1KJC3_012264-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012264-T1.cdsKJC3_012264-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012264-T1.utr3p1KJC3_012264-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012264-T1.exon4KJC3_012264-T1.exon4Aspergillus niger KJC3exon
KJC3_012264-T1.exon3KJC3_012264-T1.exon3Aspergillus niger KJC3exon
KJC3_012264-T1.exon2KJC3_012264-T1.exon2Aspergillus niger KJC3exon
KJC3_012264-T1.exon1KJC3_012264-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012264-T1.utr5p1KJC3_012264-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR025207
DBxrefPFAM:PF13093
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3051151..3052743 -
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