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KJC3_012266-T1, KJC3_012266-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012266-T1
Unique NameKJC3_012266-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3054325..3055482+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012266-T1 ID=KJC3_012266-T1|Name=KJC3_012266-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1158bp|location=Sequence derived from alignment at ch8:3054325..3055482+ (Aspergillus niger KJC3)
ATGGTGAGTTTTGCTGTAATTCTCAAGAGACTGGGAACCGACTTCAACGC
AAATTCCCCCCTCGCCTGAACGTAAATTTCAGGTCATCCCACATGGGCGA
CCGCACTGTGGGATTGGAAACGGGTCTTTGCAAGATGCTTCGGACGGTCT
TTCTCTGAAGCGCAAATTGCTGACTCGACTGTGTCTTGTAGCCTTTCCAC
AAGCTCGTCAAGAACAGCGCTTACTACAGGTAAGAAATCCACGAGACCCC
TCATCTGGCAAAAATTTGGCATAAACTAATAAAATTCCTTCTACAGCCGC
TACCAGACCAAGTACCGTCGTCGCCGCGAGGGTAAGACCGACTACTATGC
CCGTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGCCCCCAAGT
ACCGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCACCCAGATCGTC
TACTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTACTCCCACGA
GCTCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGGGCTGCCGCCT
ACGCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGCTCGGCCTG
GATGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTACACCCTCAC
CGAGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAAGGCTTTCC
TTGATGTCGGTCTTGCCCGTACCTCCACTGGTGCCCGTGTCTTCGGTGCC
ATGAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCCGAGAGCCG
CTTCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGAGACTCTCC
GCAACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGGGTCTTGCC
GACGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTACCAGGAGGC
TGGTGTTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGCCCACAAGG
CCATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTGAGAAGAAG
ACCAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAGCAGCGCCT
CACCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCGTGAGCTTG
CTGCTTAA
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Coding sequence (CDS) from alignment at ch8:3054325..3055482+

>KJC3_012266-T1 ID=KJC3_012266-T1|Name=KJC3_012266-T1|organism=Aspergillus niger KJC3|type=CDS|length=2709bp|location=Sequence derived from alignment at ch8:3054325..3055482+ (Aspergillus niger KJC3)
ATGCCTTTCCACAAGCTCGTCAAGAACAGCGCTTACTACAGCCGCTACCA
GACCAAGTACCGTCGTCGCCGCGAGGGTAAGACCGACTACTATGCCCGTA
AGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGCCCCCAAGTACCGC
CTGGTCGTCCGCTTCACCAACCGCGACATCATCACCCAGATCGTCTACTC
TGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTACTCCCACGAGCTCA
AGCGCTATGGCATCACCAACGGTCTGACCAACTGGGCTGCCGCCTACGCC
ACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGCTCGGCCTGGATGA
GCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTACACCCTCACCGAGG
CTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAAGGCTTTCCTTGAT
GTCGGTCTTGCCCGTACCTCCACTGGTGCCCGTGTCTTCGGTGCCATGAA
GGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCCGAGAGCCGCTTCC
CCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGAGACTCTCCGCAAC
TACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGGGTCTTGCCGACGA
CGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTACCAGGAGGCTGGTG
TTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGCCCACAAGGCCATC
CGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTGAGAAGAAGACCAA
GGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAGCAGCGCCTCACCC
GCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCGTGAGCTTGCTGCT
TAAATGCCTTTCCACAAGCTCGTCAAGAACAGCGCTTACTACAGCCGCTA
CCAGACCAAGTACCGTCGTCGCCGCGAGGGTAAGACCGACTACTATGCCC
GTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGCCCCCAAGTAC
CGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCACCCAGATCGTCTA
CTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTACTCCCACGAGC
TCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGGGCTGCCGCCTAC
GCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGCTCGGCCTGGA
TGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTACACCCTCACCG
AGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAAGGCTTTCCTT
GATGTCGGTCTTGCCCGTACCTCCACTGGTGCCCGTGTCTTCGGTGCCAT
GAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCCGAGAGCCGCT
TCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGAGACTCTCCGC
AACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGGGTCTTGCCGA
CGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTACCAGGAGGCTG
GTGTTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGCCCACAAGGCC
ATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTGAGAAGAAGAC
CAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAGCAGCGCCTCA
CCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCGTGAGCTTGCT
GCTTAAATGCCTTTCCACAAGCTCGTCAAGAACAGCGCTTACTACAGCCG
CTACCAGACCAAGTACCGTCGTCGCCGCGAGGGTAAGACCGACTACTATG
CCCGTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGCCCCCAAG
TACCGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCACCCAGATCGT
CTACTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTACTCCCACG
AGCTCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGGGCTGCCGCC
TACGCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGCTCGGCCT
GGATGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTACACCCTCA
CCGAGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAAGGCTTTC
CTTGATGTCGGTCTTGCCCGTACCTCCACTGGTGCCCGTGTCTTCGGTGC
CATGAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCCGAGAGCC
GCTTCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGAGACTCTC
CGCAACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGGGTCTTGC
CGACGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTACCAGGAGG
CTGGTGTTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGCCCACAAG
GCCATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTGAGAAGAA
GACCAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAGCAGCGCC
TCACCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCGTGAGCTT
GCTGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:00080975S rRNA binding
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL5KJC3_012266Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012266-T1.exon1KJC3_012266-T1.exon1Aspergillus niger KJC3exon
KJC3_012266-T1.exon2KJC3_012266-T1.exon2Aspergillus niger KJC3exon
KJC3_012266-T1.exon3KJC3_012266-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012266-T1.cdsKJC3_012266-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012266-T1KJC3_012266-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926419M
DBxrefInterPro:IPR025607
DBxrefInterPro:IPR005485
DBxrefPFAM:PF17144
DBxrefPFAM:PF14204
Product60S ribosomal protein L5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3054325..3055482 +
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