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KJC3_012277-T1, KJC3_012277-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012277-T1
Unique NameKJC3_012277-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3092871..3094396+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012277-T1 ID=KJC3_012277-T1|Name=KJC3_012277-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1526bp|location=Sequence derived from alignment at ch8:3092871..3094396+ (Aspergillus niger KJC3)
CATTGATTCCCCCCATCCTGTTCCCTTCCTTCACTCTTACCTCTTGTCTC
CCATTGCTCGGTGTCCTGCTCAATTCCCAAGTCGACAAGCGACTTCGTCT
CCAATCATGTCAACCAAGAAGATCGAGCAGTGGGAAATCGAACGGTACTG
GGAGATCTTCGCATCGCTGGCAGGCGGCCAGCCGCGTCTGAACAACTCCC
AAGCGGCCTCGGTACTCAGGAACAGTCGGCTTCGTGATGACCAACTGGAA
AAGGTCTGGGACCTGGCAGATGTCGACGGCGATGGCGAACTAGACTTTGA
GGAGTTCTGTGTTGCCATGCGATTGGTGTTCGACCTTGTGAACGGGGTAT
GTGAGCTCCCCTACTGTGGCGCCTCCCGGCCCTCCTGGTGCTGCATGTCT
CCTTTCCCGCCCGCTTCGGCAGTTCAATGATCCCCCACACCATTACGTTC
CATGCTAATGTATCCAACCCGCAAAGGAATTACAAGCAGTCCCAAACGTC
CTGCCGGACTGGCTCGTGCCCGAATCCAAAGCTCATTTAGTCCATGCGAC
CCGAGCCCTGAGCGGTCGTCCGGAGCAGTTCGAGCGGATAGAAGACGAGG
ACGATACTCCCGGCCTGAAAGATGGGTTTGAATGGTACATGAACCCGTCT
GATAAGTCTAAATATGAAGAAATCTATCTCGCGAACAAAAACCGCCGCGG
GGAAATCTCATGTATGTCCGGATTCAAGCTACCCCCCAACTTCTACCTCC
CGAGCCTTGAAACTGACATGATGCGGTCTTGTATAGTCGAATCATTACAG
CCTCTTTACGACTCTCTCGACGTCCCGGACACGGACATCCGCTCTGCATG
GAACCTGGTCAACCCTTCTGCATCCCCGACCATCAACAAAGACGCTACCC
TTGCATTTCTGCATATGCTCAACTACCGCCACGAGGGCTTCCGCATTCCC
CGCGCCATTCCTGCGTCTCTGCGCGCTTCATTCGAGAACAACCATATTGA
CTACCAAGTCGACAATGCCCGTCCCGCCCAGAAATGGGGCGCAAGCGGCG
ATACGGAGACCCTCACAGGCCGGAAGGCCAAGTTCGGAGATACCTATCTG
AGTCGGTTGGGTGCTGGAGGAAAGACCTCCTATACACCCAAGGGAACGGA
TTTCAGCGACACCATCCAGGATGAAGAGTGGGAGAAGGTCCGGTTGAGGC
GCGAGCTGGCGGAGATGGAGTCTAAGCTGGATTCCGCTAGGAAGGCCTCC
GAAGGCCGACGCGATCGACCTCGAAACGACGGTCGGCCCAACTGGGTGTT
GATCAAGAAAGAAGCACTCCAGCTGCTGGAGTACAAGGAGCGGGAGCTGC
GGGAGCTGCGTGAAGGCGCAGGCCGATCCAAAGACGGCCAGAACGTAGAA
CGTCTCAGAGATGATGTCAAGACCGTTGGCGAGCAGGTCGAGGGATTGAA
GAGCCATCTGGCGCAACGGAAGGAAGTGCTCTCTGATCTGCGGGCACAGG
TCGAAGAGGCAAAGTTGTCCCGATAA
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Coding sequence (CDS) from alignment at ch8:3092871..3094396+

>KJC3_012277-T1 ID=KJC3_012277-T1|Name=KJC3_012277-T1|organism=Aspergillus niger KJC3|type=CDS|length=3645bp|location=Sequence derived from alignment at ch8:3092871..3094396+ (Aspergillus niger KJC3)
ATGTCAACCAAGAAGATCGAGCAGTGGGAAATCGAACGGTACTGGGAGAT
CTTCGCATCGCTGGCAGGCGGCCAGCCGCGTCTGAACAACTCCCAAGCGG
CCTCGGTACTCAGGAACAGTCGGCTTCGTGATGACCAACTGGAAAAGGTC
TGGGACCTGGCAGATGTCGACGGCGATGGCGAACTAGACTTTGAGGAGTT
CTGTGTTGCCATGCGATTGGTGTTCGACCTTGTGAACGGGGAATTACAAG
CAGTCCCAAACGTCCTGCCGGACTGGCTCGTGCCCGAATCCAAAGCTCAT
TTAGTCCATGCGACCCGAGCCCTGAGCGGTCGTCCGGAGCAGTTCGAGCG
GATAGAAGACGAGGACGATACTCCCGGCCTGAAAGATGGGTTTGAATGGT
ACATGAACCCGTCTGATAAGTCTAAATATGAAGAAATCTATCTCGCGAAC
AAAAACCGCCGCGGGGAAATCTCATTCGAATCATTACAGCCTCTTTACGA
CTCTCTCGACGTCCCGGACACGGACATCCGCTCTGCATGGAACCTGGTCA
ACCCTTCTGCATCCCCGACCATCAACAAAGACGCTACCCTTGCATTTCTG
CATATGCTCAACTACCGCCACGAGGGCTTCCGCATTCCCCGCGCCATTCC
TGCGTCTCTGCGCGCTTCATTCGAGAACAACCATATTGACTACCAAGTCG
ACAATGCCCGTCCCGCCCAGAAATGGGGCGCAAGCGGCGATACGGAGACC
CTCACAGGCCGGAAGGCCAAGTTCGGAGATACCTATCTGAGTCGGTTGGG
TGCTGGAGGAAAGACCTCCTATACACCCAAGGGAACGGATTTCAGCGACA
CCATCCAGGATGAAGAGTGGGAGAAGGTCCGGTTGAGGCGCGAGCTGGCG
GAGATGGAGTCTAAGCTGGATTCCGCTAGGAAGGCCTCCGAAGGCCGACG
CGATCGACCTCGAAACGACGGTCGGCCCAACTGGGTGTTGATCAAGAAAG
AAGCACTCCAGCTGCTGGAGTACAAGGAGCGGGAGCTGCGGGAGCTGCGT
GAAGGCGCAGGCCGATCCAAAGACGGCCAGAACGTAGAACGTCTCAGAGA
TGATGTCAAGACCGTTGGCGAGCAGGTCGAGGGATTGAAGAGCCATCTGG
CGCAACGGAAGGAAGTGCTCTCTGATCTGCGGGCACAGGTCGAAGAGGCA
AAGTTGTCCCGATAAATGTCAACCAAGAAGATCGAGCAGTGGGAAATCGA
ACGGTACTGGGAGATCTTCGCATCGCTGGCAGGCGGCCAGCCGCGTCTGA
ACAACTCCCAAGCGGCCTCGGTACTCAGGAACAGTCGGCTTCGTGATGAC
CAACTGGAAAAGGTCTGGGACCTGGCAGATGTCGACGGCGATGGCGAACT
AGACTTTGAGGAGTTCTGTGTTGCCATGCGATTGGTGTTCGACCTTGTGA
ACGGGGAATTACAAGCAGTCCCAAACGTCCTGCCGGACTGGCTCGTGCCC
GAATCCAAAGCTCATTTAGTCCATGCGACCCGAGCCCTGAGCGGTCGTCC
GGAGCAGTTCGAGCGGATAGAAGACGAGGACGATACTCCCGGCCTGAAAG
ATGGGTTTGAATGGTACATGAACCCGTCTGATAAGTCTAAATATGAAGAA
ATCTATCTCGCGAACAAAAACCGCCGCGGGGAAATCTCATTCGAATCATT
ACAGCCTCTTTACGACTCTCTCGACGTCCCGGACACGGACATCCGCTCTG
CATGGAACCTGGTCAACCCTTCTGCATCCCCGACCATCAACAAAGACGCT
ACCCTTGCATTTCTGCATATGCTCAACTACCGCCACGAGGGCTTCCGCAT
TCCCCGCGCCATTCCTGCGTCTCTGCGCGCTTCATTCGAGAACAACCATA
TTGACTACCAAGTCGACAATGCCCGTCCCGCCCAGAAATGGGGCGCAAGC
GGCGATACGGAGACCCTCACAGGCCGGAAGGCCAAGTTCGGAGATACCTA
TCTGAGTCGGTTGGGTGCTGGAGGAAAGACCTCCTATACACCCAAGGGAA
CGGATTTCAGCGACACCATCCAGGATGAAGAGTGGGAGAAGGTCCGGTTG
AGGCGCGAGCTGGCGGAGATGGAGTCTAAGCTGGATTCCGCTAGGAAGGC
CTCCGAAGGCCGACGCGATCGACCTCGAAACGACGGTCGGCCCAACTGGG
TGTTGATCAAGAAAGAAGCACTCCAGCTGCTGGAGTACAAGGAGCGGGAG
CTGCGGGAGCTGCGTGAAGGCGCAGGCCGATCCAAAGACGGCCAGAACGT
AGAACGTCTCAGAGATGATGTCAAGACCGTTGGCGAGCAGGTCGAGGGAT
TGAAGAGCCATCTGGCGCAACGGAAGGAAGTGCTCTCTGATCTGCGGGCA
CAGGTCGAAGAGGCAAAGTTGTCCCGATAAATGTCAACCAAGAAGATCGA
GCAGTGGGAAATCGAACGGTACTGGGAGATCTTCGCATCGCTGGCAGGCG
GCCAGCCGCGTCTGAACAACTCCCAAGCGGCCTCGGTACTCAGGAACAGT
CGGCTTCGTGATGACCAACTGGAAAAGGTCTGGGACCTGGCAGATGTCGA
CGGCGATGGCGAACTAGACTTTGAGGAGTTCTGTGTTGCCATGCGATTGG
TGTTCGACCTTGTGAACGGGGAATTACAAGCAGTCCCAAACGTCCTGCCG
GACTGGCTCGTGCCCGAATCCAAAGCTCATTTAGTCCATGCGACCCGAGC
CCTGAGCGGTCGTCCGGAGCAGTTCGAGCGGATAGAAGACGAGGACGATA
CTCCCGGCCTGAAAGATGGGTTTGAATGGTACATGAACCCGTCTGATAAG
TCTAAATATGAAGAAATCTATCTCGCGAACAAAAACCGCCGCGGGGAAAT
CTCATTCGAATCATTACAGCCTCTTTACGACTCTCTCGACGTCCCGGACA
CGGACATCCGCTCTGCATGGAACCTGGTCAACCCTTCTGCATCCCCGACC
ATCAACAAAGACGCTACCCTTGCATTTCTGCATATGCTCAACTACCGCCA
CGAGGGCTTCCGCATTCCCCGCGCCATTCCTGCGTCTCTGCGCGCTTCAT
TCGAGAACAACCATATTGACTACCAAGTCGACAATGCCCGTCCCGCCCAG
AAATGGGGCGCAAGCGGCGATACGGAGACCCTCACAGGCCGGAAGGCCAA
GTTCGGAGATACCTATCTGAGTCGGTTGGGTGCTGGAGGAAAGACCTCCT
ATACACCCAAGGGAACGGATTTCAGCGACACCATCCAGGATGAAGAGTGG
GAGAAGGTCCGGTTGAGGCGCGAGCTGGCGGAGATGGAGTCTAAGCTGGA
TTCCGCTAGGAAGGCCTCCGAAGGCCGACGCGATCGACCTCGAAACGACG
GTCGGCCCAACTGGGTGTTGATCAAGAAAGAAGCACTCCAGCTGCTGGAG
TACAAGGAGCGGGAGCTGCGGGAGCTGCGTGAAGGCGCAGGCCGATCCAA
AGACGGCCAGAACGTAGAACGTCTCAGAGATGATGTCAAGACCGTTGGCG
AGCAGGTCGAGGGATTGAAGAGCCATCTGGCGCAACGGAAGGAAGTGCTC
TCTGATCTGCGGGCACAGGTCGAAGAGGCAAAGTTGTCCCGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006897endocytosis
GO:0007015actin filament organization
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
END3KJC3_012277Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012277-T1.utr5p1KJC3_012277-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012277-T1.exon1KJC3_012277-T1.exon1Aspergillus niger KJC3exon
KJC3_012277-T1.exon2KJC3_012277-T1.exon2Aspergillus niger KJC3exon
KJC3_012277-T1.exon3KJC3_012277-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012277-T1.cdsKJC3_012277-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012277-T1KJC3_012277-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR018247
DBxrefInterPro:IPR025604
DBxrefInterPro:IPR000261
DBxrefInterPro:IPR002048
DBxrefPFAM:PF12761
DBxrefPFAM:PF12763
DBxrefPFAM:PF00036
Productendocytosis defective- protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3092871..3094396 +
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