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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3099186..3100676+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012279-T1 ID=KJC3_012279-T1|Name=KJC3_012279-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1491bp|location=Sequence derived from alignment at ch8:3099186..3100676+ (Aspergillus niger KJC3)
ATGGATCGATTGCCCCTCGAACTGCATATACGAATCGGCCGACATCTGCA
CACCCAAGATTTATACCAGCTGGTTCTCGTCTCAAAATCCTATCATTCCA
CTTTCACCCCGGAGCTTTACCGCGAGATCATGATTTCGGGAGAATACCAG
GAGTCTAACACCAATTCCTACTGGCCATCTGTCCCGGTAACGCGCAAGAG
CCGCCCTCCTGGCCGATGTCTCCCTTATGCCCTTAGTGAACACCCAGTCC
TTGCTGGTTTCGTCCGCTCACTGGTGTTGCTCCCACTCGCACACCAGGGT
TCTCCACAACCCAAACCGTCACGAGCTCTTCAGGAAACAGATTGGCTAGA
CTCCTTGCTCCCCCATCCGGTGACCAGACAGACAATCCTGTGTTGGCAAA
AGGCCCTTGATTCTGACGAAAAACTCGATTCTCGCCAGCCCCTGAGAAAT
CCCTGGTTCGCCCTGCTATTGCTTCAGCTCAAGAATCTACGGCGTCTTTC
TGTTTATTTGCCATGCGAGGAACGCGTGTCTGGACTAAACTACACCTCTG
CGACGCCTTATTTTGACAGCGTCATCCATGGGGCAGCAAAACCCGGATCA
GGGATCCTCCCCCGCTTGACCCATCTCACTATCAACGAAGCTCACTTACG
GTGGCATCATAAGCGGTCAGGTATACCCCTGAGTCAGCTGGCACCATTTC
TTCGGATCCCTTCCCTGAGATATATACGTGTTGGGCAGCTCACTGAGAAT
AATAAGCAAGCTCTCCCTCGCGACTTCAGCTGCGGAATAACCCATACTGA
TATCGAACTGTGTGATAAAACCATCACTCAATTGCCACGCCTCCTCTCGG
GGTGTTCAAAGCTCGAATCCTTCACATGGGCGCTCGAGGAGTCAACACAT
CATTTCTATAATGACCCGCACAGTCCTGCTTACCACTGGAATCCCAACCG
CGTGTATGCTCCTCTTTACGAAGCCCGCTCCACGCTGCGGCACCTTACTA
TGATATCTTATGAGTGCAGTGGCGACATGTTCCTCTTTCACGATCTGGAG
TATCCCCAGCCAGCATACTTCGGGCCCCTGTGTGACTTTCCTGTCCTGGA
AACCCTAAACATGCCGATGGTTAATCTAATGCCTTTTCATCCCGGCACAC
ATGTCCCGGTTTCTCCTCTGTGGGAGACTCTCCCAAGCTCGCTCAAGTCC
CTATCCATATACGGGTGTCTTTTGCAGAGTTCGCATATGCTCTGCGACGA
GCTGGAAGACTTGGCAGCACATTGCCAGACACATTTCCCTCTGCTTAATA
TGGTGTACATCGTGTATTCCAATTTTGAGAAGATCAATGGGCAGCAATGT
AGTGCCTGTCGCGGCGAACGTACTAAGTACGATATGGTCAAGCGAGACCC
AGTGATCGATGGGCGGCTTGAAGCATTGAAAGTCAGGTTTGAAATGCTCG
GGGTCATTTTGGCCGTCAATAAATCCATGAACTGGTTCTGA back to topCoding sequence (CDS) from alignment at ch8:3099186..3100676+ >KJC3_012279-T1 ID=KJC3_012279-T1|Name=KJC3_012279-T1|organism=Aspergillus niger KJC3|type=CDS|length=1491bp|location=Sequence derived from alignment at ch8:3099186..3100676+ (Aspergillus niger KJC3)
ATGGATCGATTGCCCCTCGAACTGCATATACGAATCGGCCGACATCTGCA
CACCCAAGATTTATACCAGCTGGTTCTCGTCTCAAAATCCTATCATTCCA
CTTTCACCCCGGAGCTTTACCGCGAGATCATGATTTCGGGAGAATACCAG
GAGTCTAACACCAATTCCTACTGGCCATCTGTCCCGGTAACGCGCAAGAG
CCGCCCTCCTGGCCGATGTCTCCCTTATGCCCTTAGTGAACACCCAGTCC
TTGCTGGTTTCGTCCGCTCACTGGTGTTGCTCCCACTCGCACACCAGGGT
TCTCCACAACCCAAACCGTCACGAGCTCTTCAGGAAACAGATTGGCTAGA
CTCCTTGCTCCCCCATCCGGTGACCAGACAGACAATCCTGTGTTGGCAAA
AGGCCCTTGATTCTGACGAAAAACTCGATTCTCGCCAGCCCCTGAGAAAT
CCCTGGTTCGCCCTGCTATTGCTTCAGCTCAAGAATCTACGGCGTCTTTC
TGTTTATTTGCCATGCGAGGAACGCGTGTCTGGACTAAACTACACCTCTG
CGACGCCTTATTTTGACAGCGTCATCCATGGGGCAGCAAAACCCGGATCA
GGGATCCTCCCCCGCTTGACCCATCTCACTATCAACGAAGCTCACTTACG
GTGGCATCATAAGCGGTCAGGTATACCCCTGAGTCAGCTGGCACCATTTC
TTCGGATCCCTTCCCTGAGATATATACGTGTTGGGCAGCTCACTGAGAAT
AATAAGCAAGCTCTCCCTCGCGACTTCAGCTGCGGAATAACCCATACTGA
TATCGAACTGTGTGATAAAACCATCACTCAATTGCCACGCCTCCTCTCGG
GGTGTTCAAAGCTCGAATCCTTCACATGGGCGCTCGAGGAGTCAACACAT
CATTTCTATAATGACCCGCACAGTCCTGCTTACCACTGGAATCCCAACCG
CGTGTATGCTCCTCTTTACGAAGCCCGCTCCACGCTGCGGCACCTTACTA
TGATATCTTATGAGTGCAGTGGCGACATGTTCCTCTTTCACGATCTGGAG
TATCCCCAGCCAGCATACTTCGGGCCCCTGTGTGACTTTCCTGTCCTGGA
AACCCTAAACATGCCGATGGTTAATCTAATGCCTTTTCATCCCGGCACAC
ATGTCCCGGTTTCTCCTCTGTGGGAGACTCTCCCAAGCTCGCTCAAGTCC
CTATCCATATACGGGTGTCTTTTGCAGAGTTCGCATATGCTCTGCGACGA
GCTGGAAGACTTGGCAGCACATTGCCAGACACATTTCCCTCTGCTTAATA
TGGTGTACATCGTGTATTCCAATTTTGAGAAGATCAATGGGCAGCAATGT
AGTGCCTGTCGCGGCGAACGTACTAAGTACGATATGGTCAAGCGAGACCC
AGTGATCGATGGGCGGCTTGAAGCATTGAAAGTCAGGTTTGAAATGCTCG
GGGTCATTTTGGCCGTCAATAAATCCATGAACTGGTTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | InterPro:IPR032675 |
| DBxref | PFAM:PF12937 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3099186..3100676 + |
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