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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3135377..3138814+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012291-T1 ID=KJC3_012291-T1|Name=KJC3_012291-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3438bp|location=Sequence derived from alignment at ch8:3135377..3138814+ (Aspergillus niger KJC3)
GCCTCTCTTTCTCTCCTCTCTCATTCTTTTGTTTTGCTTTCTTTCTTCTT
GGTAACAATCTGTCCATAGGAATTGTTCCATATTTCTTGGTATTGCAGAG
TCCTACTATTATATACTGCAAGGTTTGGGTGTAAGGAGTCCCTATTACTA
CTAGTCATCATTCCCAACTCGAACACCGGGTCACTGCGACTGTTATTCAC
GGCCACTTGTTATCCACTGTATGGGTCACAACAGGTTGTTTGAGTCGTTC
AATCGGTGAATTTTTGTGCATTTCCACACATTTCAGTCATTATCCAGGAT
CAGTAGTAGTCTTACCGTGTTGGCAAACATGCCGTTCAAGTCGCGCTGGC
AGATTGACATCCCCAATACCCATCTGGCCTCGGCTTTGCTGACTTCGCCG
ACTCACCCCCTCTCCAAGACGCACCGCTGCTTCTCCGAGGCTGCTCGTCC
CGACACACACTACTTCACCCCTCACGTTTTCCGTCTATGGTGTCAACGGT
TTGCAGCAGGCTTGCGCAAGCATGGCCTACAGCCGGGTGACCGTCTACTA
CTTTACTCCGGCAATGACTTATTCTTCCCCGTCGTCTTTCTTGGCACCAT
CATGGCTGGCGGCATCTTCACCGGCGCAAACCCATCCTACGTCGCTCGGG
AACTAGCCTATCAGTTGCAGGATTCCGGTGCAACCTATCTGATCTGCGCC
GAAGGCAGTCTGGACACAGGAATCGAAGCCGCCCGACTGGCTGGACTCAA
CCGCGATCGGGTGTTTGTCTTTAGTAATGCCATATATGATGGCCAAGGAG
GTGCCGTCAAGGGCTGCCGCTACTGGGGGGACCTGATAGCGTCTGAGGAC
GAAGGCAGCGGATTCGCATGGGATGACTTGTCCAGCGCGGAGTTGGCCGA
TCGGACTCTCGCCTTGAACTACTCCAGTGGCACCACTGGCAGACCCAAAG
GGGTAGAGATCACGCACAAGAACTATGTTGCCAACCTCAGACAGTTCAAC
CACCTCTCCTACCTCAATCCGGATTGGAAGGACAAGCAGACTCGCACGCG
CTGGCTCTGTTTCCTTCCCATGTATCACGCCATGGCACAGAACATCTTCA
TCGCGTCCGCCCTAAGTCGCGATATACCCGTGTATATCATGCCCAAGTTT
GACTTTCTCAAAGTCCTCGAGTACACGGAGAAGTTCCGCATCAGCGATCT
CATCCTGGTTCCACCGGTGGCGGTGGCACTGGCCAAGCATCCTGCAGTCA
GAAGCGGCCAATACGATTTGAGTAGCGTGGAAAGCGTATCCTGCGGCGCG
GCACCTCTAGGGAGGGAGGTTTGTGTGGAGGTAGAAGCATTGTGGGAACC
TGGACGCATCAACGTCAAACAGGGATGGGGTATGACCGAGTAAGCTATCC
ACCCATTTCTGGTGTATTTTCAGTGGCGAACAACCTGCAGGCTAACGAAA
CCTCTTTGTGTCTCTCCTAAAGGGCTACGTGCTCTATGATGGGCTGGGAC
CCCAATGAGATAAGCGAATCGGCGTCAGTAGGAGAGCCAAATCCAAACTG
CGAGGCGAAGATCATGGCCGACGATGGCGTGACAGAATTGGGACGCAATC
AGCGCGGTGAACTCTGGGTCCGAGGTCAAAATGTCATGAAGGGCTACTGG
AGGAATCCGCAAGCCACAAGGGAGACCAAGACGGCGGATGGATGGCTGAA
GACAGGAGACATCGCTTATGTCGACGACAGTAACAAGTTCCACATAGTCG
ACCGAAAGAAGGTGAGCTGAACGAACAAGAAAAAAAAAATCACTGGGTCG
CCACCTGCGATGCAGGCCAATATCCAATACATTGCTTCTGTCTCGTGTTG
CATGATGCTAACTGGCATGGTTTCGCTAGGAGTTAATCAAAGTCAAAGGC
AACCAGGTCGCACCGGCTGAACTGGAAGCTCTTCTGTTGGAGCATCCCGG
AGTGGCCGATGCTGCAGTCATTGGTGTTCCAAGGTGGGTTAACAAGAGGG
TTTCATCCTAGTGAGCAAATAGGCTGATGCGGTGTTGACGAATAGGAATG
ACGACGAGAGTCCCCGGGCCTATATTGTACTAAAAACCGGACAGACCGCC
ACCGAGAAAGATATTGTGGCATTCATGGATGGCAAAGTGTCTGCGATCAA
GAGACTTACCGGAGGAGTGGTGTTCCTCGATGCGATCCCGAAGAATCCTT
CAGGAAAGATCTTGCGCAAGGCGCTGCGCGATCGCGCTAAGGAGGAGATG
CAGAAGGATACTGTCGCCGCTAAACTGTAGACGAATCCGCGGGGCCCTTC
ATTACATGCCGCACTTGCCCCAGGACGCCAAGTTGCCCGTCTAGTCGCAT
TGGCTGACCTAACTGTAAGGATGAGAGTTGTCAAATTCGGATATCGCCAT
TAGTGGGGTACATGCAGCGTAGTATTTGGAATGGATATGGAAACTCAATA
GATCGCCGACGTGCGTTTGAAGCGAACCCGGTCCTTGGGTCGTGGGCTTG
GAAGAATGGGGGTGGAGAGAGGAGAGTCGATCAGATCCCGACGATACTCG
GTGATAGTACTAGACCCATTCGAGCAATGCAGATGAACGAGCGAATGAAT
AACAGTGAATGGAGAATGCTTCCGGGGCCAGAAAAAATGGCGCGGCATGT
TTAGTGTAGTTGGTACTGGAGGCCAGGCCGGCCGAGGAGCCTGTCAGAGG
GCAAAGACAGGGCAAATCTAGCGCCACACTTGATCGCCGAGAACACCGCC
ACACTGGGGCGCCAGACGAATCTCGTTCCTGAGTCGCCCATCTTTGGGGG
GGAAGAAGAATCCAAGGGGGGCGGGAAGAAAAGACCGAAAAAGAAAAAAA
GTGGCAGCCTGTCCAGAGTCAGATGTCATGACTGTCTCATAAAGCATGAA
TCCACTCTGCAAATGGCGAGCTGATGAGAAGTATATTCATGAACCCCCAC
CGGGTCGGGACCCGGAAACTGTGAGAGTTCGAACTGGATCTGCGGTACTC
CAGACGATCACTTTCATTTTCTGGAGGGGGAAATTGGGGGGGAGAAGGCG
CAGCTGAGATGGATTGACGGGCCATGAAGGGTAATGGGGAGCGATGACAC
GAAGAAGTGATGAACAGACGGGCAAAATAGTTGAGAGAAAGGGAAGGATG
TGAAGGGAAAGAAGGAAGGAAGGTAAGAAAGGGGAAAAGAGGCGTGAGTT
CGTCGTAAACCAGCGAACTTCTTACTACATTCTAGATCACGAGGCCGGTA
AGTTACAGGGGGAAAAAGAAGACAGAATAGTATGTGGGTGGGACAGGTAA
TAATACGCGCGGGCACCTGACCGGAGGAATCCCTAGTTGGGCTTGATTTG
ATTTGATTTGATTGTACTACGTAGTATGGAGAATTATAGTGATCAATGAA
CGGATGCATGAATTGTTTCACCCGCATATTAGGAGTAG back to topCoding sequence (CDS) from alignment at ch8:3135377..3138814+ >KJC3_012291-T1 ID=KJC3_012291-T1|Name=KJC3_012291-T1|organism=Aspergillus niger KJC3|type=CDS|length=2718bp|location=Sequence derived from alignment at ch8:3135377..3138814+ (Aspergillus niger KJC3)
ATGCCGTTCAAGTCGCGCTGGCAGATTGACATCCCCAATACCCATCTGGC
CTCGGCTTTGCTGACTTCGCCGACTCACCCCCTCTCCAAGACGCACCGCT
GCTTCTCCGAGGCTGCTCGTCCCGACACACACTACTTCACCCCTCACGTT
TTCCGTCTATGGTGTCAACGGTTTGCAGCAGGCTTGCGCAAGCATGGCCT
ACAGCCGGGTGACCGTCTACTACTTTACTCCGGCAATGACTTATTCTTCC
CCGTCGTCTTTCTTGGCACCATCATGGCTGGCGGCATCTTCACCGGCGCA
AACCCATCCTACGTCGCTCGGGAACTAGCCTATCAGTTGCAGGATTCCGG
TGCAACCTATCTGATCTGCGCCGAAGGCAGTCTGGACACAGGAATCGAAG
CCGCCCGACTGGCTGGACTCAACCGCGATCGGGTGTTTGTCTTTAGTAAT
GCCATATATGATGGCCAAGGAGGTGCCGTCAAGGGCTGCCGCTACTGGGG
GGACCTGATAGCGTCTGAGGACGAAGGCAGCGGATTCGCATGGGATGACT
TGTCCAGCGCGGAGTTGGCCGATCGGACTCTCGCCTTGAACTACTCCAGT
GGCACCACTGGCAGACCCAAAGGGGTAGAGATCACGCACAAGAACTATGT
TGCCAACCTCAGACAGTTCAACCACCTCTCCTACCTCAATCCGGATTGGA
AGGACAAGCAGACTCGCACGCGCTGGCTCTGTTTCCTTCCCATGTATCAC
GCCATGGCACAGAACATCTTCATCGCGTCCGCCCTAAGTCGCGATATACC
CGTGTATATCATGCCCAAGTTTGACTTTCTCAAAGTCCTCGAGTACACGG
AGAAGTTCCGCATCAGCGATCTCATCCTGGTTCCACCGGTGGCGGTGGCA
CTGGCCAAGCATCCTGCAGTCAGAAGCGGCCAATACGATTTGAGTAGCGT
GGAAAGCGTATCCTGCGGCGCGGCACCTCTAGGGAGGGAGGTTTGTGTGG
AGGTAGAAGCATTGTGGGAACCTGGACGCATCAACGTCAAACAGGGATGG
GGTATGACCGAGGCTACGTGCTCTATGATGGGCTGGGACCCCAATGAGAT
AAGCGAATCGGCGTCAGTAGGAGAGCCAAATCCAAACTGCGAGGCGAAGA
TCATGGCCGACGATGGCGTGACAGAATTGGGACGCAATCAGCGCGGTGAA
CTCTGGGTCCGAGGTCAAAATGTCATGAAGGGCTACTGGAGGAATCCGCA
AGCCACAAGGGAGACCAAGACGGCGGATGGATGGCTGAAGACAGGAGACA
TCGCTTATGTCGACGACAGTAACAAGTTCCACATAGTCGACCGAAAGAAG
GTGAGCTGAATGCCGTTCAAGTCGCGCTGGCAGATTGACATCCCCAATAC
CCATCTGGCCTCGGCTTTGCTGACTTCGCCGACTCACCCCCTCTCCAAGA
CGCACCGCTGCTTCTCCGAGGCTGCTCGTCCCGACACACACTACTTCACC
CCTCACGTTTTCCGTCTATGGTGTCAACGGTTTGCAGCAGGCTTGCGCAA
GCATGGCCTACAGCCGGGTGACCGTCTACTACTTTACTCCGGCAATGACT
TATTCTTCCCCGTCGTCTTTCTTGGCACCATCATGGCTGGCGGCATCTTC
ACCGGCGCAAACCCATCCTACGTCGCTCGGGAACTAGCCTATCAGTTGCA
GGATTCCGGTGCAACCTATCTGATCTGCGCCGAAGGCAGTCTGGACACAG
GAATCGAAGCCGCCCGACTGGCTGGACTCAACCGCGATCGGGTGTTTGTC
TTTAGTAATGCCATATATGATGGCCAAGGAGGTGCCGTCAAGGGCTGCCG
CTACTGGGGGGACCTGATAGCGTCTGAGGACGAAGGCAGCGGATTCGCAT
GGGATGACTTGTCCAGCGCGGAGTTGGCCGATCGGACTCTCGCCTTGAAC
TACTCCAGTGGCACCACTGGCAGACCCAAAGGGGTAGAGATCACGCACAA
GAACTATGTTGCCAACCTCAGACAGTTCAACCACCTCTCCTACCTCAATC
CGGATTGGAAGGACAAGCAGACTCGCACGCGCTGGCTCTGTTTCCTTCCC
ATGTATCACGCCATGGCACAGAACATCTTCATCGCGTCCGCCCTAAGTCG
CGATATACCCGTGTATATCATGCCCAAGTTTGACTTTCTCAAAGTCCTCG
AGTACACGGAGAAGTTCCGCATCAGCGATCTCATCCTGGTTCCACCGGTG
GCGGTGGCACTGGCCAAGCATCCTGCAGTCAGAAGCGGCCAATACGATTT
GAGTAGCGTGGAAAGCGTATCCTGCGGCGCGGCACCTCTAGGGAGGGAGG
TTTGTGTGGAGGTAGAAGCATTGTGGGAACCTGGACGCATCAACGTCAAA
CAGGGATGGGGTATGACCGAGGCTACGTGCTCTATGATGGGCTGGGACCC
CAATGAGATAAGCGAATCGGCGTCAGTAGGAGAGCCAAATCCAAACTGCG
AGGCGAAGATCATGGCCGACGATGGCGTGACAGAATTGGGACGCAATCAG
CGCGGTGAACTCTGGGTCCGAGGTCAAAATGTCATGAAGGGCTACTGGAG
GAATCCGCAAGCCACAAGGGAGACCAAGACGGCGGATGGATGGCTGAAGA
CAGGAGACATCGCTTATGTCGACGACAGTAACAAGTTCCACATAGTCGAC
CGAAAGAAGGTGAGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012291-T1.utr5p1 | KJC3_012291-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012291-T1.utr3p1 | KJC3_012291-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020845 |
| DBxref | InterPro:IPR000873 |
| DBxref | PFAM:PF13193 |
| DBxref | PFAM:PF00501 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3135377..3138814 + |
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