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KJC3_012297-T1, KJC3_012297-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012297-T1
Unique NameKJC3_012297-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3146877..3152179-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012297-T1 ID=KJC3_012297-T1|Name=KJC3_012297-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5303bp|location=Sequence derived from alignment at ch8:3146877..3152179- (Aspergillus niger KJC3)
GCTCCCTCGTCACTTGGCTGAGTTCCCCGCAGCGAAAGCGAAAGCAAAAG
CAAACGCAGCCTGCAATCCACCCTTTTAAGGTTACTCCTCTCTTCATTCT
CGCAGGGCGTGGAACTTACTTAGTGCAACTGCGCCCTATTCCTGATACCT
GTAAGATGGGCTTGCTCACTCCTCCCTTTTCTCACGGTTGCCTGGTTGTT
ACAGCATTGTCCGCTCGCCGAAGACCCCCTCCCCTCTCTCTCCGTTCGCG
ACGAGACCCCAGTGATCACCTGTAGAACACGCAAGCAGTTAACAATCAAG
CCATGTCTGCAGGGCCGTTTCCAGATTTCTCTGCTAGCAGATCTTCTCAA
CCTGGATTATATTCCCTCACAGGCAATTCCATTGACGGCAAGGGCGGAGC
TAGCCTAGGAAAGCCTGATCTCCTGGTGAGCCCAGCCATGGATCACACAG
GCCCGGATGAAGATGGGCTCCCAACAAACACGAACCACTCGCGCATGCAC
AATCGTAATCGCTCCAGCGTCGATGGAACCAAATACAAGGATGGACAATG
GTCGCCAGATAATGAGAGAATCGTTCTGGGACCATACGATTATATGCTAC
AGCACCCCGGCAAAGACATACGGCGGCAGCTTATCAACGCTTTCAACGTA
TGGTTGAAGGTACCCCCGGAGAGCCTCTCAATCATCACAAAGGTGGTGGC
CATGCTTCATACTGCATCGTTACTGTAAGCTGTTTTCATCGTGCCTCGGT
TTAGTCTGGACACCTACCTGACCTATGGCGTATGAGCCAGGATCGATGAT
GTCGAGGATAACTCTATTTTGCGACGCGGTATTCCCGTAGCTCATAACAT
ATACGGCACCGCGCAAACCATCAACTCTGCGAACTATGTATATTTCCTTG
CTCTGCAAGAGGTGCAAAAGTTGAACAACCCCGCTGCGATTGACATCTAC
GTCCAAGAGTTATTGAACCTACACCGCGGTCAAGGAATGGATCTCTTCTG
GCGAGATACTCTGACTTGCCCCAGCGAGGACGAGTATTTGGAAATGGTCG
GTAACAAAACTGGGGGTTTGTTCCGACTTGCAGTGAAGTTGATGCAGGCT
GAAAGTAGCTCCGGAAAGGACTGCGTGAGCCTCGTCAACGTCATGGGGCT
GATTTTCCAAATCTGCGACGACTACCTCAACCTGTCCAACACTACGTACA
CCAAGAACAAAGGTCTTTGTGAAGATCTCACGGAGGGAAAGTTCTCCTTT
CCCATCATTCATAGTATCCGATCCAACCCCGGAAACCACCAGCTCCTGAG
TATTCTCAAGCAAAAGACGAAAGATGACGAAGTCAAACTGTATGCAGTCA
GTTACATGGAGAGCACTGGCAGTTTTGCGCACACGCGGGACGTGGTCCGA
GAATTGCGAGCCAAAGCACTGACCCTAATTCAAGCGATCGATGGTGACCA
AGCAGATGGACGCGAAGACGGCGCCATGGTTCGGGCGATCCTCAACAAGA
TCACCGAGTCGACACTGGGGGAGTGTGGTCCCCAGTAGTAGATTCAAACA
GGCGATGGTCAAGCACTCATTCTCGGGGATAATTCGCTGCCCATCCCTGG
TTGGTTGGTTGGTCGATTGGATGGGATCTCGTATTTTATACAGGATGTTG
AAACGTGATATATTTTAGCCTATTGATCAGATGCCTTATAATCTGAAACA
TTGCGCACTCATGGCGACTCTAATACGAACTTCAATGATCTTATTCCCTT
CTTAGCTTCTCCTCTTCTAATCCGGGAGAGATAAGAAACCAGAACATGTT
AATCACCGTCTAGATACTGAATCCAACACACAGCCCGGGGTATATGTAAT
CTTCCGCCAAATGCCCAATTGCGCGAAAGTCCAATGATCAGTCGTGTCTG
CTCACGCACCCTTCTTTGTCTATACCAACCACATATCATATCATGTATAG
GCCAAAAAATACTCTTTTGCCCAAACAAAATCTTTATCCCAGTGTCCCTC
AAATCCTTTTCACATGACCACACAGCAAGCCTTCTCCAGCTTATTGAGAA
TCTTAGGCAGAACCGCATTAACCACCTGCTCGATCTCATCCTGGTTGCCC
GCACCCTGTTGTTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTGCTGCTG
CTGTTGCGAACCGGGATATTGCTGCTGCTGCTGCTGATGCGGGTGAGCAT
AGGTACCCGACGGATGCTGTTGATGCTGAGGGTATTGCTGATAGTGAGGA
TGATTGGGCGTTGGCGCAGTCTCCATATCCGCCGGTCCACCAGTCAGATT
CACATAAATGCGCCCTGCGTTCTCCTCAGTCGCGTACTGGAGACCGAGTT
CCTGGCAGACTTGCTCTACTCGGGGCTTGATTTTCTGGATATGATTGGCG
GAGTGGTTGCCCTTGCCGACAATTCTATTGATTGGGGAAAATTGTAACAA
TTAGCGATCAGTGTCGAGGGTAAAGAAGAAGCCAGTGTGTGTGAGAGTAA
CGTGAAAGGGAAGCTTACACATGGAGATGATCCTGACCGTGCGCTTTCGC
ATATTTAATCCTCTCCTCGAGAATCTCCTCAGCCTCTTCGACGAATTGTC
CGTGCAGATCGATGGTGTCTGCCGCAACACGCCCGTTGGCGTTGTTCTCG
CGGAAGATGAACTCCGACGCTTGCTTGTTGTATTCTTCCATCTTGCGACC
GTGGGCTTTGCCTTGTTCCGAGAGTTCTTTGGCCTTGGCGCCATCGCCGC
TGGAGTAGGCTTCTTGAGACTGACCATTAAATATTGGTTAGTTGTTTGTT
TCTTTCTCTAATTTGGCGAGCGGTTGGGTGGTTGCGACAGTGGTTGTTAA
TGGCGTACCCGTTGGAAACATGAGTTGCGCTTTGAAGCTTCTTGTCGGGC
TAGGTTGCGGAGTCGGTCATATTCAGCCTCTGCATCTTGGCTCTGATCGT
GACTGAAGGCTTCGGTATCGGTGCCGTTAGTTTATGGGAGATTGTGGCTA
TGAAGGTAGGAAGGGATCATACCCCGAGGGCCCATGTAGGACATTTCATG
CTCATGCATTTTGACGAATAAGGGGTGTCTATCGAATGAAACCGGATGTA
ATGATAACGGGATGGTTTATCTGCGACGGACAGCAAATCCCTACGGGTAT
CGTCTGTATGCGATATCCTCGATCGCAAAAAAAGTGTAGCGCAAAAGGCG
AAGACTGCGAAGGAAGGCCGATCGCGCGAGTGGATGTTGCAGTCCCTGGG
AGATGGATCGGGAATTGGATCCGTGGATGGATCAGTGGAGCGGCGATCGG
ATTGGCCGATGAGCCAGCCAGGGATCGTGGATGGAATCGCACAGGGAAAA
GGCTGGGCTGGATTGGAGATCCATGGTCACCTTCTTTCTTAGATAACTTC
ATGCGGTAGGCGATAGTCTAGTTATCGGTTTGGGTTGAGTGTCTTACTCT
GCACGGTCTTCCTCAATCTCTTTCTTCGTATTGACAGGATGCACGGTCAG
CCACCCCCATCACGGGTTGCAACGGACTGGGAGACTTTAGAAAGCCTGTC
AGCCCATTTCCGTGCTTACTTACAATCCTGCAGACCAGACCATCATCCAC
CAATCCTTTGCCATTCGGCATTTCTGCAGCCTGAGCCACCTCCATCAAGT
CCTGTTCAGCACTGACCGTACTCAGCACTTCTTCCAGGCTATACAACCGA
GTCAGTAAAAGCGTCTACATAATAAGGTGTCTACGCCAAGGTCACCAAGC
CAGTGAAGAGTGGAAACCAAGTCAATAGTCTGGCCATGCTCCATGCGAAG
ATGGGGATAAGTCCAGTCCGAGCTGCCTTCTTAGGCTATCGGTCGACAGC
GGCAGGAGTTCTCGATTATAAGCAGTTGCGATCCTCCAGGGGATATGTAA
CTTAAGTTACTCATCATAATTAGTATAACCCAGAGTGGTAGGAGAGTACA
TGTCAGGCAGCTCGCCACGAGGCCCTTCCCCAAGTCAAAGGGGGGTGAGG
GGGAAAGACGCGATGGTAAGGAGACGACAATCATCATGAATAGCGCGGGC
GGTAAAAGCAAGCGACTAAAGGCGACTAGACAGTGGAGAAGTTGGTCTCT
AGTCGAGTGGCAGAACCACGGATTTCGGTTACCGACCTCCATTCCAGCAA
GCAATATCTGAGCAGATTCCATCTTGCACGATTCAGGCGGGTCGTTCCGC
CTGTGCATGCCCGGTGGTTGTGGGAGACAAGTCGCTGAATCCTTCTTTTA
TCCATGGGAGACGTTGTCACAGCATGAGATGATGCGACTGAAGGAGTACA
TATTGGATTTCGATGTTGCCACTGGGCGAAACCACAAGCGTGTATCAGAA
CTCAGAAGATATGGGTGAGCAGCGAATGGGTCTTTGTGAATGCATGATTC
TCATCTCCCTATCCATTTTTCTCCCTTTTGTGCGGAGAAGCGATCGACGG
GCAGTTGCAAGTGGAGTTTTACCATACAGTACCTGGCCGTAGGAACAGGA
ACGACAATATTCCTCCGTACGCTAATGCCCATCCCAATCTTGAGGCCATC
CACCTTTTCCACATGGTAGAGCTGCAGTAGTAGCCTCCGCTGGTTGCATT
CTACCCCGTATATCATCACATCAGACATGCACGATACCGCCACGTTTGAT
TCCTCAGAATGTCCGGTCTATGAATAGACACTACGAGTAAAGCGTCACTG
TCTCTTTTTCCAACTCAAGCCCCCAAGACATTCTGGAACAAGCCAACCGA
CCGCGTAACTTTGTGTGATGGAAAAGCCAGCCATGATGGCGCGGTGTACC
TGGCGATCGGGCGCTGAGCGTGCCGGGCCTCCACCGCGTGGTGGGCACCT
GAAACTGCAGGCGCCCTTCCAGCTTGCACCCTTTACCAGGTTTAGAAACG
GTCGGCTACTACGAACTGTTGACGATGTCTTCTGCGGCTCCTGCTGCTGC
TGTGGTTGTTATTACTGCTGCAGGATTAGTCTAGTCCGTTACTGATGAGC
AGCAGAGACAAGAGAGATCTGGGATTGATTTCGTCACCAGTGGAGGTCAG
CGCTTAACATGATTTGAAGAGTTTAAAAACAACACCTGATGGGCTGTCGA
ATGGCATCCCGGTCGCCATGGCCATCTCCTACAGGTGCGCACTGCAGATC
TGCGTCATCCGGAAATTAATTCATGCAACTGAATCATTAATCATTATATC
TACGGCAACGACAACTTTGGAAGAAGATTGCCACTCTATATGGGATTTAA
CTTTGAACCTCTTTCATGTCTCATAGTTTGCTGGATCATGCCTTATGCTA
CCG
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Coding sequence (CDS) from alignment at ch8:3146877..3152179-

>KJC3_012297-T1 ID=KJC3_012297-T1|Name=KJC3_012297-T1|organism=Aspergillus niger KJC3|type=CDS|length=2070bp|location=Sequence derived from alignment at ch8:3146877..3152179- (Aspergillus niger KJC3)
GATCGATGATGTCGAGGATAACTCTATTTTGCGACGCGGTATTCCCGTAG
CTCATAACATATACGGCACCGCGCAAACCATCAACTCTGCGAACTATGTA
TATTTCCTTGCTCTGCAAGAGGTGCAAAAGTTGAACAACCCCGCTGCGAT
TGACATCTACGTCCAAGAGTTATTGAACCTACACCGCGGTCAAGGAATGG
ATCTCTTCTGGCGAGATACTCTGACTTGCCCCAGCGAGGACGAGTATTTG
GAAATGGTCGGTAACAAAACTGGGGGTTTGTTCCGACTTGCAGTGAAGTT
GATGCAGGCTGAAAGTAGCTCCGGAAAGGACTGCGTGAGCCTCGTCAACG
TCATGGGGCTGATTTTCCAAATCTGCGACGACTACCTCAACCTGTCCAAC
ACTACGTACACCAAGAACAAAGGTCTTTGTGAAGATCTCACGGAGGGAAA
GTTCTCCTTTCCCATCATTCATAGTATCCGATCCAACCCCGGAAACCACC
AGCTCCTGAGTATTCTCAAGCAAAAGACGAAAGATGACGAAGTCAAACTG
TATGCAGTCAGTTACATGGAGAGCACTGGCAGTTTTGCGCACACGCGGGA
CGTGGTCCGAGAATTGCGAGCCAAAGCACTGACCCTAATTCAAGCGATCG
ATGGTGACCAAGCAGATGGACGCGAAGACGGCGCCATGGTTCGGGCGATC
CTCAACAAGATCACCGAGTCGACACTGGGGGAGTGTGGTCCCCAGTAGAT
GGATCACACAGGCCCGGATGAAGATGGGCTCCCAACAAACACGAACCACT
CGCGCATGCACAATCGTAATCGCTCCAGCGTCGATGGAACCAAATACAAG
GATGGACAATGGTCGCCAGATAATGAGAGAATCGTTCTGGGACCATACGA
TTATATGCTACAGCACCCCGGCAAAGACATACGGCGGCAGCTTATCAACG
CTTTCAACGTATGGTTGAAGGTACCCCCGGAGAGCCTCTCAATCATCACA
AAGGTGGTGGCCATGCTTCATACTGCATCGTTACTGATCGATGATGTCGA
GGATAACTCTATTTTGCGACGCGGTATTCCCGTAGCTCATAACATATACG
GCACCGCGCAAACCATCAACTCTGCGAACTATGTATATTTCCTTGCTCTG
CAAGAGGTGCAAAAGTTGAACAACCCCGCTGCGATTGACATCTACGTCCA
AGAGTTATTGAACCTACACCGCGGTCAAGGAATGGATCTCTTCTGGCGAG
ATACTCTGACTTGCCCCAGCGAGGACGAGTATTTGGAAATGGTCGGTAAC
AAAACTGGGGGTTTGTTCCGACTTGCAGTGAAGTTGATGCAGGCTGAAAG
TAGCTCCGGAAAGGACTGCGTGAGCCTCGTCAACGTCATGGGGCTGATTT
TCCAAATCTGCGACGACTACCTCAACCTGTCCAACACTACGTACACCAAG
AACAAAGGTCTTTGTGAAGATCTCACGGAGGGAAAGTTCTCCTTTCCCAT
CATTCATAGTATCCGATCCAACCCCGGAAACCACCAGCTCCTGAGTATTC
TCAAGCAAAAGACGAAAGATGACGAAGTCAAACTGTATGCAGTCAGTTAC
ATGGAGAGCACTGGCAGTTTTGCGCACACGCGGGACGTGGTCCGAGAATT
GCGAGCCAAAGCACTGACCCTAATTCAAGCGATCGATGGTGACCAAGCAG
ATGGACGCGAAGACGGCGCCATGGTTCGGGCGATCCTCAACAAGATCACC
GAGTCGACACTGGGGGAGTGTGGTCCCCAGTAGATGGATCACACAGGCCC
GGATGAAGATGGGCTCCCAACAAACACGAACCACTCGCGCATGCACAATC
GTAATCGCTCCAGCGTCGATGGAACCAAATACAAGGATGGACAATGGTCG
CCAGATAATGAGAGAATCGTTCTGGGACCATACGATTATATGCTACAGCA
CCCCGGCAAAGACATACGGCGGCAGCTTATCAACGCTTTCAACGTATGGT
TGAAGGTACCCCCGGAGAGCCTCTCAATCATCACAAAGGTGGTGGCCATG
CTTCATACTGCATCGTTACT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
AL3KJC3_012297Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012297-T1KJC3_012297-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012297-T1.cdsKJC3_012297-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012297-T1.utr3p2KJC3_012297-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_012297-T1.utr3p1KJC3_012297-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012297-T1.exon4KJC3_012297-T1.exon4Aspergillus niger KJC3exon
KJC3_012297-T1.exon3KJC3_012297-T1.exon3Aspergillus niger KJC3exon
KJC3_012297-T1.exon2KJC3_012297-T1.exon2Aspergillus niger KJC3exon
KJC3_012297-T1.exon1KJC3_012297-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012297-T1.utr5p2KJC3_012297-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012297-T1.utr5p1KJC3_012297-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8.7
NoteSMCOG1182:Polyprenyl synthetase
DBxrefInterPro:IPR033749
DBxrefInterPro:IPR008949
DBxrefInterPro:IPR000092
DBxrefPFAM:PF00348
Productfarnesyltranstransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3146877..3152179 -
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