|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3158724..3160032- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012301-T1 ID=KJC3_012301-T1|Name=KJC3_012301-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1309bp|location=Sequence derived from alignment at ch8:3158724..3160032- (Aspergillus niger KJC3)
TAAATAGTTGGGCGAGAACGGATCTGTTCCTCTGTTCATCAAACACAAAC
AAACCTACATCGACCTCTCGTCTTCTAGCTGGCCCTGTCGCCAACTCCCC
GGCTTTATCAAACTGGCCCCGAGCTCTTCCGCCGTGTCTCTTAAACCCAT
TGCGCAGTCCCCTCCATCCATCCATTAATCCAATGACCCCCGAATACCGT
GATGACCCTGGCCAGACACCGGACAATGTGAGCACGGTGTCGCGCGCTCG
AGACTTTTTCTCCGTTCCTACACCAATCAAGCGCATCTTCGACCGTTTCC
CCCTCGTCACCTACCCCTCCAATGATCTCCCGCACAGCGCATGGTCAGAT
AAACGTGGCAATCGACTGTATGTCTTCACCGATGCCGCAAGTGCCAGGCA
TGGCAGACCGTCGTTCAACCCACAGTGTCTCAAGTGGCAGGTACGTACTC
CGAAATGCAGCATTACACCACGTCTCCAGTACATCATCACTAATCTGTTA
TTTCTCTGCGTCTCTGCAGGCATACTTAAGATTCGTTGGGATCGACGTCG
ACGTGATTCCTTCCAACAACCATGCATCTCCCTCTGGCGCCCTTCCTTTC
CTGATCCCCGCCCACCCCATCAACAACAACGCCCCTATTCCTTCCAGCAA
GCTCCAAAAATGGGCCATTGAGCAAGTGCACTGCGAGGAGGAGCAGCAGT
TGGATCTGCGCTTCGAGGTATATGCGTCGTTGCTGGATCATCGGATACGA
AATGCTTGGGTGCGTTGCGGTCCCCCTCCCCCGGAATGAAATGTCGTAGA
TGAAATGTGACTGACTGGAATGGCACTGGGGCAGCTATATACCTTATACC
TGGACCCTGAGGAGTTCGAGGCCGTTGCTCGACCATTATACGTGAACCCG
TCCAGTACAAATTCCGCCGTGCGGACCGCTCTCGCCCTGCAACTCCAGCA
AGCTGCCCGGACAGAGATCCTAAAAACGTCATCTTATATCGATGTGGGCG
CCTTGGAAGCCGAAGCCAACGATGCATTCGAGGCACTGTCTACGCTACTG
GGCGACAACCAACACTTCTTCGACCGACCGAATCCGGGTCTGTTCGATGC
TAGTGTTTTCGCATACACACACCTAATCCTGGAGGAGAAACTGGGGTGGC
GACGGAATCGGCTGGGACAGTTGCTGCGCCAACACGAGAACCTTGTACAA
CATCGTGACAGACTCCTCAAGTTCTTCTAGACGGATGGATTTGTGACAGA
ATCCTCTAATTACACTGTACAATAACACCTTATATGTGTCAATGCTACCT
AACTAGAAC back to topCoding sequence (CDS) from alignment at ch8:3158724..3160032- >KJC3_012301-T1 ID=KJC3_012301-T1|Name=KJC3_012301-T1|organism=Aspergillus niger KJC3|type=CDS|length=2682bp|location=Sequence derived from alignment at ch8:3158724..3160032- (Aspergillus niger KJC3)
CTATATACCTTATACCTGGACCCTGAGGAGTTCGAGGCCGTTGCTCGACC
ATTATACGTGAACCCGTCCAGTACAAATTCCGCCGTGCGGACCGCTCTCG
CCCTGCAACTCCAGCAAGCTGCCCGGACAGAGATCCTAAAAACGTCATCT
TATATCGATGTGGGCGCCTTGGAAGCCGAAGCCAACGATGCATTCGAGGC
ACTGTCTACGCTACTGGGCGACAACCAACACTTCTTCGACCGACCGAATC
CGGGTCTGTTCGATGCTAGTGTTTTCGCATACACACACCTAATCCTGGAG
GAGAAACTGGGGTGGCGACGGAATCGGCTGGGACAGTTGCTGCGCCAACA
CGAGAACCTTGTACAACATCGTGACAGACTCCTCAAGTTCTTCTAGGCAT
ACTTAAGATTCGTTGGGATCGACGTCGACGTGATTCCTTCCAACAACCAT
GCATCTCCCTCTGGCGCCCTTCCTTTCCTGATCCCCGCCCACCCCATCAA
CAACAACGCCCCTATTCCTTCCAGCAAGCTCCAAAAATGGGCCATTGAGC
AAGTGCACTGCGAGGAGGAGCAGCAGTTGGATCTGCGCTTCGAGGTATAT
GCGTCGTTGCTGGATCATCGGATACGAAATGCTTGGATGACCCCCGAATA
CCGTGATGACCCTGGCCAGACACCGGACAATGTGAGCACGGTGTCGCGCG
CTCGAGACTTTTTCTCCGTTCCTACACCAATCAAGCGCATCTTCGACCGT
TTCCCCCTCGTCACCTACCCCTCCAATGATCTCCCGCACAGCGCATGGTC
AGATAAACGTGGCAATCGACTGTATGTCTTCACCGATGCCGCAAGTGCCA
GGCATGGCAGACCGTCGTTCAACCCACAGTGTCTCAAGTGGCAGCTATAT
ACCTTATACCTGGACCCTGAGGAGTTCGAGGCCGTTGCTCGACCATTATA
CGTGAACCCGTCCAGTACAAATTCCGCCGTGCGGACCGCTCTCGCCCTGC
AACTCCAGCAAGCTGCCCGGACAGAGATCCTAAAAACGTCATCTTATATC
GATGTGGGCGCCTTGGAAGCCGAAGCCAACGATGCATTCGAGGCACTGTC
TACGCTACTGGGCGACAACCAACACTTCTTCGACCGACCGAATCCGGGTC
TGTTCGATGCTAGTGTTTTCGCATACACACACCTAATCCTGGAGGAGAAA
CTGGGGTGGCGACGGAATCGGCTGGGACAGTTGCTGCGCCAACACGAGAA
CCTTGTACAACATCGTGACAGACTCCTCAAGTTCTTCTAGGCATACTTAA
GATTCGTTGGGATCGACGTCGACGTGATTCCTTCCAACAACCATGCATCT
CCCTCTGGCGCCCTTCCTTTCCTGATCCCCGCCCACCCCATCAACAACAA
CGCCCCTATTCCTTCCAGCAAGCTCCAAAAATGGGCCATTGAGCAAGTGC
ACTGCGAGGAGGAGCAGCAGTTGGATCTGCGCTTCGAGGTATATGCGTCG
TTGCTGGATCATCGGATACGAAATGCTTGGATGACCCCCGAATACCGTGA
TGACCCTGGCCAGACACCGGACAATGTGAGCACGGTGTCGCGCGCTCGAG
ACTTTTTCTCCGTTCCTACACCAATCAAGCGCATCTTCGACCGTTTCCCC
CTCGTCACCTACCCCTCCAATGATCTCCCGCACAGCGCATGGTCAGATAA
ACGTGGCAATCGACTGTATGTCTTCACCGATGCCGCAAGTGCCAGGCATG
GCAGACCGTCGTTCAACCCACAGTGTCTCAAGTGGCAGCTATATACCTTA
TACCTGGACCCTGAGGAGTTCGAGGCCGTTGCTCGACCATTATACGTGAA
CCCGTCCAGTACAAATTCCGCCGTGCGGACCGCTCTCGCCCTGCAACTCC
AGCAAGCTGCCCGGACAGAGATCCTAAAAACGTCATCTTATATCGATGTG
GGCGCCTTGGAAGCCGAAGCCAACGATGCATTCGAGGCACTGTCTACGCT
ACTGGGCGACAACCAACACTTCTTCGACCGACCGAATCCGGGTCTGTTCG
ATGCTAGTGTTTTCGCATACACACACCTAATCCTGGAGGAGAAACTGGGG
TGGCGACGGAATCGGCTGGGACAGTTGCTGCGCCAACACGAGAACCTTGT
ACAACATCGTGACAGACTCCTCAAGTTCTTCTAGGCATACTTAAGATTCG
TTGGGATCGACGTCGACGTGATTCCTTCCAACAACCATGCATCTCCCTCT
GGCGCCCTTCCTTTCCTGATCCCCGCCCACCCCATCAACAACAACGCCCC
TATTCCTTCCAGCAAGCTCCAAAAATGGGCCATTGAGCAAGTGCACTGCG
AGGAGGAGCAGCAGTTGGATCTGCGCTTCGAGGTATATGCGTCGTTGCTG
GATCATCGGATACGAAATGCTTGGATGACCCCCGAATACCGTGATGACCC
TGGCCAGACACCGGACAATGTGAGCACGGTGTCGCGCGCTCGAGACTTTT
TCTCCGTTCCTACACCAATCAAGCGCATCTTCGACCGTTTCCCCCTCGTC
ACCTACCCCTCCAATGATCTCCCGCACAGCGCATGGTCAGATAAACGTGG
CAATCGACTGTATGTCTTCACCGATGCCGCAAGTGCCAGGCATGGCAGAC
CGTCGTTCAACCCACAGTGTCTCAAGTGGCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012301-T1.utr3p1 | KJC3_012301-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012301-T1.utr5p1 | KJC3_012301-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.7 |
| DBxref | InterPro:IPR012336 |
| DBxref | InterPro:IPR033468 |
| DBxref | InterPro:IPR021211 |
| DBxref | PFAM:PF10568 |
| DBxref | PFAM:PF17172 |
| DBxref | PFAM:PF17171 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3158724..3160032 - |
|
