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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3202182..3204206- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012312-T1 ID=KJC3_012312-T1|Name=KJC3_012312-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2025bp|location=Sequence derived from alignment at ch8:3202182..3204206- (Aspergillus niger KJC3)
CGAAAGCAAGAATTATTTGGTCGCTCAAGGACTCAAAAACCCAGTGTTGT
GTCTCTGAGTTCTGTCTCTTTTTCCCTTCTCTGCTCTGCTGTGACAGATA
GAACAAGTTTCAAGTGAGCGAGTGGATTTATTGAGTAGTATTCCACTTGA
GCTGCCGTTGTTCCTCTCCCCCGCCATTCATTCACTAGTTCGCTCTTTCC
TCCTGTCTATCCTCTCTACTTTCCCCTTCACCACCAATACAGTACTTAGC
TTATTAGCCCCCTCAGCAATATGCAGGTACCGTTGCTTCGCCTTCAGTGT
GGTGAGTATTCATTCCCCCGAGCCTTCAACTCGAAATTAGAGAATAATGT
CACTAATAGTCCGTCTTCTTTATCCTCAGGTGTCAACAGCTATGACTGGG
GTAGGACATCCCCGCATCCTGGATTGGTCCGCCCGTTGCGTTTGCTGAAG
CTGGTCTAGGCAAGATTGGTCATGAGTCTGCTGCCGCAAAGTATGCCGCC
ATTACTGCAGGCTCCGATTTCTCCATAGAACCTGAGAAGCCGTATGCAGA
GGTTCGCTCCCTGAATTCTTGATGTTCTCATGGCGGTAAACTGACCCGGT
GACGTATAGTTGTGGATGGGCACCCATCCTTCCCTTCCCTCCAAAGATGT
CGAAACCCAGCGAACCCTCCTCGATATGGTCCAGGATAACCAGGCATTGA
TCTCCAAGGAAGTGAGCGAGCGATATGGAGGGAAATTGCCTTTCCTTTTC
AAGGTTCTTTCTGTTCAAAAGGCTCTCAGTATCCAAGCCCATCCGAATAA
GAAACTGGCTGAAAAGCTTCATGCCCGGGACGCCCGAAACTATCCAGGTA
ACCTATATAATTCTATCTGATAACAATCGCAACTCTGATCATCGCTTTAT
AGATGATAATCACAAACCCGAAATGACAATTGCGATCACCCCGTTCGAAG
GACTGTGCGGCTTCCGACCGCTGGCCGAAATCGTTCACTTCCTTAACGCA
GTCGCCCCTCTCCGCGAGTTAGTCGGCACGCAAGCAGTGAATCAATTCGA
GAGTGTTGTCAAGGGATCTGAAGACTCGCAGGATTCTGACAAAATGGCAA
GAAACAAGGACGCGTTACGCTCCCTATTCACATCGCTAATGAAGTCATCA
CCGGAAAGCATTGAGGCTGCCACCCAGAAGCTGATCTCTGCGGCTCAGGA
TTCTCCTGATACATTTGCTACTTCTACCAGCACTCCGGAGACGAATCCGA
GCAACCCTGCCGAATTGGCTGCCATTATCGCTCGACTTAACGGACAATTC
CCTAACGACATCGGGCTATTCGTGTTCTTCTTCCTGAATTTTGTCAAGCT
GGCACCAGGTGAAGCCATGTTCTTGAAGGCTGATGACATCCATGCATACA
TCTCTGGAGACATTATCGAATGCATGGCGTCGTCTGATAACGTTGTGCGG
GCGGGCTTCACTCCCAAGTTCAAGGACGTTGATACACTCACCGAAATGCT
GACATACTCCTATGCGCCAATTGAAGAGCAAAAGCTGGAGCCGACCGACT
ATCCATATGCCGTTCTCAATGCCTCCGCCTACTCAAGTGGTTCATCGTCT
CTTCTCTACGACCCTCCGATTGAAGAGTTTAGTGTGGTCAAGACGGATCT
GAAGAGGGCTGGGGCCAAAGCAACTTTCGACGCACTGGTGGGTCCCAGCA
TCCTGATATGCACAGGCGGAACTGGGAAGATTACGGTCGGCCACAAGACT
GAGGAAGTGAAGGAAGGCTATGTATTCTTTGTGGGAGCCAACGCCGAGTG
TATCGTCGAAAGTACGGGCAGTGGAGAGGAGGATGTGTTTACCACATATA
AGGCATTCTGTGATCTGACGGGCAAGGAGGACATGGTGAATGGAAACTAG
AATGTGTCTATATCTAAGCTATAATGCGTTAGAGGGAAATATCACATACT
TCTGAACTAGTAGTTCCGAGCCGAGGTCATCTCTTCAGCTGCGGGGGCTG
GCTTAAGCACAGTGGAAGAGCTGCT back to topCoding sequence (CDS) from alignment at ch8:3202182..3204206- >KJC3_012312-T1 ID=KJC3_012312-T1|Name=KJC3_012312-T1|organism=Aspergillus niger KJC3|type=CDS|length=6900bp|location=Sequence derived from alignment at ch8:3202182..3204206- (Aspergillus niger KJC3)
ATGATAATCACAAACCCGAAATGACAATTGCGATCACCCCGTTCGAAGGA
CTGTGCGGCTTCCGACCGCTGGCCGAAATCGTTCACTTCCTTAACGCAGT
CGCCCCTCTCCGCGAGTTAGTCGGCACGCAAGCAGTGAATCAATTCGAGA
GTGTTGTCAAGGGATCTGAAGACTCGCAGGATTCTGACAAAATGGCAAGA
AACAAGGACGCGTTACGCTCCCTATTCACATCGCTAATGAAGTCATCACC
GGAAAGCATTGAGGCTGCCACCCAGAAGCTGATCTCTGCGGCTCAGGATT
CTCCTGATACATTTGCTACTTCTACCAGCACTCCGGAGACGAATCCGAGC
AACCCTGCCGAATTGGCTGCCATTATCGCTCGACTTAACGGACAATTCCC
TAACGACATCGGGCTATTCGTGTTCTTCTTCCTGAATTTTGTCAAGCTGG
CACCAGGTGAAGCCATGTTCTTGAAGGCTGATGACATCCATGCATACATC
TCTGGAGACATTATCGAATGCATGGCGTCGTCTGATAACGTTGTGCGGGC
GGGCTTCACTCCCAAGTTCAAGGACGTTGATACACTCACCGAAATGCTGA
CATACTCCTATGCGCCAATTGAAGAGCAAAAGCTGGAGCCGACCGACTAT
CCATATGCCGTTCTCAATGCCTCCGCCTACTCAAGTGGTTCATCGTCTCT
TCTCTACGACCCTCCGATTGAAGAGTTTAGTGTGGTCAAGACGGATCTGA
AGAGGGCTGGGGCCAAAGCAACTTTCGACGCACTGGTGGGTCCCAGCATC
CTGATATGCACAGGCGGAACTGGGAAGATTACGGTCGGCCACAAGACTGA
GGAAGTGAAGGAAGGCTATGTATTCTTTGTGGGAGCCAACGCCGAGTGTA
TCGTCGAAAGTACGGGCAGTGGAGAGGAGGATGTGTTTACCACATATAAG
GCATTCTGTGATCTGACGGGCAAGGAGGACATGGTGAATGGAAACTAGTT
GTGGATGGGCACCCATCCTTCCCTTCCCTCCAAAGATGTCGAAACCCAGC
GAACCCTCCTCGATATGGTCCAGGATAACCAGGCATTGATCTCCAAGGAA
GTGAGCGAGCGATATGGAGGGAAATTGCCTTTCCTTTTCAAGGTTCTTTC
TGTTCAAAAGGCTCTCAGTATCCAAGCCCATCCGAATAAGAAACTGGCTG
AAAAGCTTCATGCCCGGGACGCCCGAAACTATCCAGGCAAGATTGGTCAT
GAGTCTGCTGCCGCAAAGTATGCCGCCATTACTGCAGGCTCCGATTTCTC
CATAGAACCTGAGAAGCCGTATGCAGAGGTGTCAACAGCTATGACTGGGA
TGCAGGTACCGTTGCTTCGCCTTCAGTGTGATGATAATCACAAACCCGAA
ATGACAATTGCGATCACCCCGTTCGAAGGACTGTGCGGCTTCCGACCGCT
GGCCGAAATCGTTCACTTCCTTAACGCAGTCGCCCCTCTCCGCGAGTTAG
TCGGCACGCAAGCAGTGAATCAATTCGAGAGTGTTGTCAAGGGATCTGAA
GACTCGCAGGATTCTGACAAAATGGCAAGAAACAAGGACGCGTTACGCTC
CCTATTCACATCGCTAATGAAGTCATCACCGGAAAGCATTGAGGCTGCCA
CCCAGAAGCTGATCTCTGCGGCTCAGGATTCTCCTGATACATTTGCTACT
TCTACCAGCACTCCGGAGACGAATCCGAGCAACCCTGCCGAATTGGCTGC
CATTATCGCTCGACTTAACGGACAATTCCCTAACGACATCGGGCTATTCG
TGTTCTTCTTCCTGAATTTTGTCAAGCTGGCACCAGGTGAAGCCATGTTC
TTGAAGGCTGATGACATCCATGCATACATCTCTGGAGACATTATCGAATG
CATGGCGTCGTCTGATAACGTTGTGCGGGCGGGCTTCACTCCCAAGTTCA
AGGACGTTGATACACTCACCGAAATGCTGACATACTCCTATGCGCCAATT
GAAGAGCAAAAGCTGGAGCCGACCGACTATCCATATGCCGTTCTCAATGC
CTCCGCCTACTCAAGTGGTTCATCGTCTCTTCTCTACGACCCTCCGATTG
AAGAGTTTAGTGTGGTCAAGACGGATCTGAAGAGGGCTGGGGCCAAAGCA
ACTTTCGACGCACTGGTGGGTCCCAGCATCCTGATATGCACAGGCGGAAC
TGGGAAGATTACGGTCGGCCACAAGACTGAGGAAGTGAAGGAAGGCTATG
TATTCTTTGTGGGAGCCAACGCCGAGTGTATCGTCGAAAGTACGGGCAGT
GGAGAGGAGGATGTGTTTACCACATATAAGGCATTCTGTGATCTGACGGG
CAAGGAGGACATGGTGAATGGAAACTAGTTGTGGATGGGCACCCATCCTT
CCCTTCCCTCCAAAGATGTCGAAACCCAGCGAACCCTCCTCGATATGGTC
CAGGATAACCAGGCATTGATCTCCAAGGAAGTGAGCGAGCGATATGGAGG
GAAATTGCCTTTCCTTTTCAAGGTTCTTTCTGTTCAAAAGGCTCTCAGTA
TCCAAGCCCATCCGAATAAGAAACTGGCTGAAAAGCTTCATGCCCGGGAC
GCCCGAAACTATCCAGGCAAGATTGGTCATGAGTCTGCTGCCGCAAAGTA
TGCCGCCATTACTGCAGGCTCCGATTTCTCCATAGAACCTGAGAAGCCGT
ATGCAGAGGTGTCAACAGCTATGACTGGGATGCAGGTACCGTTGCTTCGC
CTTCAGTGTGATGATAATCACAAACCCGAAATGACAATTGCGATCACCCC
GTTCGAAGGACTGTGCGGCTTCCGACCGCTGGCCGAAATCGTTCACTTCC
TTAACGCAGTCGCCCCTCTCCGCGAGTTAGTCGGCACGCAAGCAGTGAAT
CAATTCGAGAGTGTTGTCAAGGGATCTGAAGACTCGCAGGATTCTGACAA
AATGGCAAGAAACAAGGACGCGTTACGCTCCCTATTCACATCGCTAATGA
AGTCATCACCGGAAAGCATTGAGGCTGCCACCCAGAAGCTGATCTCTGCG
GCTCAGGATTCTCCTGATACATTTGCTACTTCTACCAGCACTCCGGAGAC
GAATCCGAGCAACCCTGCCGAATTGGCTGCCATTATCGCTCGACTTAACG
GACAATTCCCTAACGACATCGGGCTATTCGTGTTCTTCTTCCTGAATTTT
GTCAAGCTGGCACCAGGTGAAGCCATGTTCTTGAAGGCTGATGACATCCA
TGCATACATCTCTGGAGACATTATCGAATGCATGGCGTCGTCTGATAACG
TTGTGCGGGCGGGCTTCACTCCCAAGTTCAAGGACGTTGATACACTCACC
GAAATGCTGACATACTCCTATGCGCCAATTGAAGAGCAAAAGCTGGAGCC
GACCGACTATCCATATGCCGTTCTCAATGCCTCCGCCTACTCAAGTGGTT
CATCGTCTCTTCTCTACGACCCTCCGATTGAAGAGTTTAGTGTGGTCAAG
ACGGATCTGAAGAGGGCTGGGGCCAAAGCAACTTTCGACGCACTGGTGGG
TCCCAGCATCCTGATATGCACAGGCGGAACTGGGAAGATTACGGTCGGCC
ACAAGACTGAGGAAGTGAAGGAAGGCTATGTATTCTTTGTGGGAGCCAAC
GCCGAGTGTATCGTCGAAAGTACGGGCAGTGGAGAGGAGGATGTGTTTAC
CACATATAAGGCATTCTGTGATCTGACGGGCAAGGAGGACATGGTGAATG
GAAACTAGTTGTGGATGGGCACCCATCCTTCCCTTCCCTCCAAAGATGTC
GAAACCCAGCGAACCCTCCTCGATATGGTCCAGGATAACCAGGCATTGAT
CTCCAAGGAAGTGAGCGAGCGATATGGAGGGAAATTGCCTTTCCTTTTCA
AGGTTCTTTCTGTTCAAAAGGCTCTCAGTATCCAAGCCCATCCGAATAAG
AAACTGGCTGAAAAGCTTCATGCCCGGGACGCCCGAAACTATCCAGGCAA
GATTGGTCATGAGTCTGCTGCCGCAAAGTATGCCGCCATTACTGCAGGCT
CCGATTTCTCCATAGAACCTGAGAAGCCGTATGCAGAGGTGTCAACAGCT
ATGACTGGGATGCAGGTACCGTTGCTTCGCCTTCAGTGTGATGATAATCA
CAAACCCGAAATGACAATTGCGATCACCCCGTTCGAAGGACTGTGCGGCT
TCCGACCGCTGGCCGAAATCGTTCACTTCCTTAACGCAGTCGCCCCTCTC
CGCGAGTTAGTCGGCACGCAAGCAGTGAATCAATTCGAGAGTGTTGTCAA
GGGATCTGAAGACTCGCAGGATTCTGACAAAATGGCAAGAAACAAGGACG
CGTTACGCTCCCTATTCACATCGCTAATGAAGTCATCACCGGAAAGCATT
GAGGCTGCCACCCAGAAGCTGATCTCTGCGGCTCAGGATTCTCCTGATAC
ATTTGCTACTTCTACCAGCACTCCGGAGACGAATCCGAGCAACCCTGCCG
AATTGGCTGCCATTATCGCTCGACTTAACGGACAATTCCCTAACGACATC
GGGCTATTCGTGTTCTTCTTCCTGAATTTTGTCAAGCTGGCACCAGGTGA
AGCCATGTTCTTGAAGGCTGATGACATCCATGCATACATCTCTGGAGACA
TTATCGAATGCATGGCGTCGTCTGATAACGTTGTGCGGGCGGGCTTCACT
CCCAAGTTCAAGGACGTTGATACACTCACCGAAATGCTGACATACTCCTA
TGCGCCAATTGAAGAGCAAAAGCTGGAGCCGACCGACTATCCATATGCCG
TTCTCAATGCCTCCGCCTACTCAAGTGGTTCATCGTCTCTTCTCTACGAC
CCTCCGATTGAAGAGTTTAGTGTGGTCAAGACGGATCTGAAGAGGGCTGG
GGCCAAAGCAACTTTCGACGCACTGGTGGGTCCCAGCATCCTGATATGCA
CAGGCGGAACTGGGAAGATTACGGTCGGCCACAAGACTGAGGAAGTGAAG
GAAGGCTATGTATTCTTTGTGGGAGCCAACGCCGAGTGTATCGTCGAAAG
TACGGGCAGTGGAGAGGAGGATGTGTTTACCACATATAAGGCATTCTGTG
ATCTGACGGGCAAGGAGGACATGGTGAATGGAAACTAGTTGTGGATGGGC
ACCCATCCTTCCCTTCCCTCCAAAGATGTCGAAACCCAGCGAACCCTCCT
CGATATGGTCCAGGATAACCAGGCATTGATCTCCAAGGAAGTGAGCGAGC
GATATGGAGGGAAATTGCCTTTCCTTTTCAAGGTTCTTTCTGTTCAAAAG
GCTCTCAGTATCCAAGCCCATCCGAATAAGAAACTGGCTGAAAAGCTTCA
TGCCCGGGACGCCCGAAACTATCCAGGCAAGATTGGTCATGAGTCTGCTG
CCGCAAAGTATGCCGCCATTACTGCAGGCTCCGATTTCTCCATAGAACCT
GAGAAGCCGTATGCAGAGGTGTCAACAGCTATGACTGGGATGCAGGTACC
GTTGCTTCGCCTTCAGTGTGATGATAATCACAAACCCGAAATGACAATTG
CGATCACCCCGTTCGAAGGACTGTGCGGCTTCCGACCGCTGGCCGAAATC
GTTCACTTCCTTAACGCAGTCGCCCCTCTCCGCGAGTTAGTCGGCACGCA
AGCAGTGAATCAATTCGAGAGTGTTGTCAAGGGATCTGAAGACTCGCAGG
ATTCTGACAAAATGGCAAGAAACAAGGACGCGTTACGCTCCCTATTCACA
TCGCTAATGAAGTCATCACCGGAAAGCATTGAGGCTGCCACCCAGAAGCT
GATCTCTGCGGCTCAGGATTCTCCTGATACATTTGCTACTTCTACCAGCA
CTCCGGAGACGAATCCGAGCAACCCTGCCGAATTGGCTGCCATTATCGCT
CGACTTAACGGACAATTCCCTAACGACATCGGGCTATTCGTGTTCTTCTT
CCTGAATTTTGTCAAGCTGGCACCAGGTGAAGCCATGTTCTTGAAGGCTG
ATGACATCCATGCATACATCTCTGGAGACATTATCGAATGCATGGCGTCG
TCTGATAACGTTGTGCGGGCGGGCTTCACTCCCAAGTTCAAGGACGTTGA
TACACTCACCGAAATGCTGACATACTCCTATGCGCCAATTGAAGAGCAAA
AGCTGGAGCCGACCGACTATCCATATGCCGTTCTCAATGCCTCCGCCTAC
TCAAGTGGTTCATCGTCTCTTCTCTACGACCCTCCGATTGAAGAGTTTAG
TGTGGTCAAGACGGATCTGAAGAGGGCTGGGGCCAAAGCAACTTTCGACG
CACTGGTGGGTCCCAGCATCCTGATATGCACAGGCGGAACTGGGAAGATT
ACGGTCGGCCACAAGACTGAGGAAGTGAAGGAAGGCTATGTATTCTTTGT
GGGAGCCAACGCCGAGTGTATCGTCGAAAGTACGGGCAGTGGAGAGGAGG
ATGTGTTTACCACATATAAGGCATTCTGTGATCTGACGGGCAAGGAGGAC
ATGGTGAATGGAAACTAGTTGTGGATGGGCACCCATCCTTCCCTTCCCTC
CAAAGATGTCGAAACCCAGCGAACCCTCCTCGATATGGTCCAGGATAACC
AGGCATTGATCTCCAAGGAAGTGAGCGAGCGATATGGAGGGAAATTGCCT
TTCCTTTTCAAGGTTCTTTCTGTTCAAAAGGCTCTCAGTATCCAAGCCCA
TCCGAATAAGAAACTGGCTGAAAAGCTTCATGCCCGGGACGCCCGAAACT
ATCCAGGCAAGATTGGTCATGAGTCTGCTGCCGCAAAGTATGCCGCCATT
ACTGCAGGCTCCGATTTCTCCATAGAACCTGAGAAGCCGTATGCAGAGGT
GTCAACAGCTATGACTGGGATGCAGGTACCGTTGCTTCGCCTTCAGTGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0004476 | mannose-6-phosphate isomerase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
| GO:0009298 | GDP-mannose biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012312-T1.utr3p1 | KJC3_012312-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012312-T1.utr5p1 | KJC3_012312-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011051 |
| DBxref | InterPro:IPR018050 |
| DBxref | InterPro:IPR014710 |
| DBxref | InterPro:IPR001250 |
| DBxref | InterPro:IPR016305 |
| DBxref | PFAM:PF01238 |
| Product | Mannose-6-phosphate isomerase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3202182..3204206 - |
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