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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3209148..3211530+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012315-T1 ID=KJC3_012315-T1|Name=KJC3_012315-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2383bp|location=Sequence derived from alignment at ch8:3209148..3211530+ (Aspergillus niger KJC3)
ACTCCACCGCAGCCAACCAGACTGACTGTCTCCTCCGACCAGAACTAACA
GCTGAAGGCTGCCTTTCCCCAATGATCCTTTCCCTATTTTTCTCCTCTTG
CCCCCTCAAATGACTCGCCGGTCCTTGTGCCAGTCCTTACTCGTCCGGAT
CGGCTGCTCCTTTTATTTTTTTTTATCTCTCTTGTGCTTCCCTTCTCGAT
GCCACCCTGATCATCCTCCAGTTAAACCCCAGATCCTCCTTAATTGTCTG
GGATTCTGATCCGCCTTGCTTGTGCTCCTCCTTCCCGTCGTATTGCATGG
CCGCTGCGTTCCCGTAGCCCGCGAGTGAGGCCATGGCCACCCGCCTTCCT
TCTCTAACCGATGTCGCTGCTTCGGCGAATCTTGACTCTTCCTCCTCAGT
CCCCTCCGCTCCCTTCTCCGCTGCTGCTACTACTGCTACTGCCCCGGCCT
CGTCAGTTCAGGGTCCATCCACCGCTGCCCCGGTCGCCACTCCCGGATCC
GACGTGGTGAAATTGGAAGACTCCCCCACACCGTCCGCATTGACCTCCGC
AGACGCAGAAACACCCGTACCGGATAACATTGGAACACCGGCAACAGGCG
CAGGTCGCAAACGCAAGCTCAACTGCACCTCAGCGCGAGGTGTAGCGAAT
CTCACCCCGGAGCAATTGGCGAAGAAGCGGGCCAACGACCGGCAGGCCCA
GCGCGCCATTCGCGAAAGGACGAAAGCTCATATTGATTCTCTGGAACAAC
GAGTTCGGGATCTTTCGTCGCAAAAGCCGTTCCTGGATCTTCAGGCGGCT
TTGAGGCAGAATGAAGTCATTCAAGCTGAAAATCGGGAGATTCGACATGG
GCTGAAAGCGATCATGGATATAATCCAGCCTTTGTTGGGGCAGCAAGAGA
AGCCGAGTATGTTCCCATGAAAATTACACATCTCGTCAGGGAGACAGTTG
CATTAACAGTTCATTCTTCCAGATACTTTGGCCGCGACGCCTTCCTCAGC
CACCAATCGAATTCCCCCAATAACATCAACACCGCCGTTGTCCGATGCCT
TCTGTTTCTCAGCCAATGGCCAGAGGTCAGCCGCTGGCGAGCACCCTACC
AATCCCGAGGCATCTTCTTCCACCGCACATGCGGCCTATGCGTCTGGCAC
GGCACGCCGTGAGATAACAGCAACCGGCCCAGCTTCTTTTCGCATCGCGT
TCGACTACCAGCGACACAATCTGGCTCACGGTCTGGACTTTGGCGGGACC
GATGAACGAATGGGCTTCAACTTTTTGCTTGACGCATCGCAGCAGGTCCC
CAAAGTAGAGGGCTTTCGACGCTCCTCGGAGACACTGAGGCCGCCGTCGA
ATCCGTCTCCAACCTACCCATCGAGTGTTCATCCTTCTATGGCGGAGCAG
CCACTGCCTGCCTACCTGACCCCAATTCGCAACATCGCTCCGACATGCAC
GCTGGACGCCATTTTGTTGGATTTTCTTCATAATCGACAGCACCAAGCAG
CGAAAGGGGTATCAAAGCAGAGCCTAGTCGGACCTTCTTATCCTAGCGTC
TCGTCCCTTCTCAACCCAGAGAAAAGCGTTTACTCGCATCCCTTGTCGAA
AGTGTTCACCGACATCCTGCGGACCTTTCCGGATATATCCACTCTCCCTG
AACAAGTGGCCGTGCTGTTTCTCATGTTCCTCCTCATGCGGTGGCAGATT
TATCCGACCCCTGAAAATTATGACCGGTTGCCCGAGTGGCTCACTCCTCG
CCCGTCGCAGCTTCTCACGGCCCATCCAGCTTGGATTGACTATCTGCCAT
GGCCGCGGATGCGAGATCGCCTGGTGATGTCGTATCAGGACTACCCCTTT
GAGAACTGGTTCATTCCCTTCACACGCACCCTGTCTGTGAATTGGCCATA
CGAAGCGACAGACTGCCTTTTGTCTTCCGGTGACGGTGACGAGCTTATGG
TTAACCCTGTCTTTGAAAGACACTTCCGCAATCTCGGTAACTGGTCGCTG
GGGCCCGCTTTTGCGGAAGCCTATCCTTCCTTGGTCGAAACCACAAGGAT
TAAAACTTCACACTGATGCAGACGGATTACCAGTCGTCCCTTGTCAGTGA
TCAAGATAAATGGCGCATCTTGATGACTTAGATGCTGGGCGTGATAAGCT
AGTATCGACTTCGAAGTTTATGTACTTCTCCCTTTCAGCCACCTCTTGCT
GTACTTGGTTGCCCTGGTGGTGCTGGCTAACGATGGTCAATATCGTTGGC
CGAAACAGCGTACAAAAAGTTGAGCTGAATAACAGGACCGCATACAGTGG
TCTTCTTTCCCCCTGGTGCCTTCCGTCTCACACGGTACTCCCTACACCGT
GTCACCCATGACCTATGCTGGCAGACAATTGAC back to topCoding sequence (CDS) from alignment at ch8:3209148..3211530+ >KJC3_012315-T1 ID=KJC3_012315-T1|Name=KJC3_012315-T1|organism=Aspergillus niger KJC3|type=CDS|length=3336bp|location=Sequence derived from alignment at ch8:3209148..3211530+ (Aspergillus niger KJC3)
ATGGCCACCCGCCTTCCTTCTCTAACCGATGTCGCTGCTTCGGCGAATCT
TGACTCTTCCTCCTCAGTCCCCTCCGCTCCCTTCTCCGCTGCTGCTACTA
CTGCTACTGCCCCGGCCTCGTCAGTTCAGGGTCCATCCACCGCTGCCCCG
GTCGCCACTCCCGGATCCGACGTGGTGAAATTGGAAGACTCCCCCACACC
GTCCGCATTGACCTCCGCAGACGCAGAAACACCCGTACCGGATAACATTG
GAACACCGGCAACAGGCGCAGGTCGCAAACGCAAGCTCAACTGCACCTCA
GCGCGAGGTGTAGCGAATCTCACCCCGGAGCAATTGGCGAAGAAGCGGGC
CAACGACCGGCAGGCCCAGCGCGCCATTCGCGAAAGGACGAAAGCTCATA
TTGATTCTCTGGAACAACGAGTTCGGGATCTTTCGTCGCAAAAGCCGTTC
CTGGATCTTCAGGCGGCTTTGAGGCAGAATGAAGTCATTCAAGCTGAAAA
TCGGGAGATTCGACATGGGCTGAAAGCGATCATGGATATAATCCAGCCTT
TGTTGGGGCAGCAAGAGAAGCCGAATACTTTGGCCGCGACGCCTTCCTCA
GCCACCAATCGAATTCCCCCAATAACATCAACACCGCCGTTGTCCGATGC
CTTCTGTTTCTCAGCCAATGGCCAGAGGTCAGCCGCTGGCGAGCACCCTA
CCAATCCCGAGGCATCTTCTTCCACCGCACATGCGGCCTATGCGTCTGGC
ACGGCACGCCGTGAGATAACAGCAACCGGCCCAGCTTCTTTTCGCATCGC
GTTCGACTACCAGCGACACAATCTGGCTCACGGTCTGGACTTTGGCGGGA
CCGATGAACGAATGGGCTTCAACTTTTTGCTTGACGCATCGCAGCAGGTC
CCCAAAGTAGAGGGCTTTCGACGCTCCTCGGAGACACTGAGGCCGCCGTC
GAATCCGTCTCCAACCTACCCATCGAGTGTTCATCCTTCTATGGCGGAGC
AGCCACTGCCTGCCTACCTGACCCCAATTCGCAACATCGCTCCGACATGC
ACGCTGGACGCCATTTTGTTGGATTTTCTTCATAATCGACAGCACCAAGC
AGCGAAAGGGGTATCAAAGCAGAGCCTAGTCGGACCTTCTTATCCTAGCG
TCTCGTCCCTTCTCAACCCAGAGAAAAGCGTTTACTCGCATCCCTTGTCG
AAAGTGTTCACCGACATCCTGCGGACCTTTCCGGATATATCCACTCTCCC
TGAACAAGTGGCCGTGCTGTTTCTCATGTTCCTCCTCATGCGGTGGCAGA
TTTATCCGACCCCTGAAAATTATGACCGGTTGCCCGAGTGGCTCACTCCT
CGCCCGTCGCAGCTTCTCACGGCCCATCCAGCTTGGATTGACTATCTGCC
ATGGCCGCGGATGCGAGATCGCCTGGTGATGTCGTATCAGGACTACCCCT
TTGAGAACTGGTTCATTCCCTTCACACGCACCCTGTCTGTGAATTGGCCA
TACGAAGCGACAGACTGCCTTTTGTCTTCCGGTGACGGTGACGAGCTTAT
GGTTAACCCTGTCTTTGAAAGACACTTCCGCAATCTCGGTAACTGGTCGC
TGGGGCCCGCTTTTGCGGAAGCCTATCCTTCCTTGGTCGAAACCACAAGG
ATTAAAACTTCACACTGAATGGCCACCCGCCTTCCTTCTCTAACCGATGT
CGCTGCTTCGGCGAATCTTGACTCTTCCTCCTCAGTCCCCTCCGCTCCCT
TCTCCGCTGCTGCTACTACTGCTACTGCCCCGGCCTCGTCAGTTCAGGGT
CCATCCACCGCTGCCCCGGTCGCCACTCCCGGATCCGACGTGGTGAAATT
GGAAGACTCCCCCACACCGTCCGCATTGACCTCCGCAGACGCAGAAACAC
CCGTACCGGATAACATTGGAACACCGGCAACAGGCGCAGGTCGCAAACGC
AAGCTCAACTGCACCTCAGCGCGAGGTGTAGCGAATCTCACCCCGGAGCA
ATTGGCGAAGAAGCGGGCCAACGACCGGCAGGCCCAGCGCGCCATTCGCG
AAAGGACGAAAGCTCATATTGATTCTCTGGAACAACGAGTTCGGGATCTT
TCGTCGCAAAAGCCGTTCCTGGATCTTCAGGCGGCTTTGAGGCAGAATGA
AGTCATTCAAGCTGAAAATCGGGAGATTCGACATGGGCTGAAAGCGATCA
TGGATATAATCCAGCCTTTGTTGGGGCAGCAAGAGAAGCCGAATACTTTG
GCCGCGACGCCTTCCTCAGCCACCAATCGAATTCCCCCAATAACATCAAC
ACCGCCGTTGTCCGATGCCTTCTGTTTCTCAGCCAATGGCCAGAGGTCAG
CCGCTGGCGAGCACCCTACCAATCCCGAGGCATCTTCTTCCACCGCACAT
GCGGCCTATGCGTCTGGCACGGCACGCCGTGAGATAACAGCAACCGGCCC
AGCTTCTTTTCGCATCGCGTTCGACTACCAGCGACACAATCTGGCTCACG
GTCTGGACTTTGGCGGGACCGATGAACGAATGGGCTTCAACTTTTTGCTT
GACGCATCGCAGCAGGTCCCCAAAGTAGAGGGCTTTCGACGCTCCTCGGA
GACACTGAGGCCGCCGTCGAATCCGTCTCCAACCTACCCATCGAGTGTTC
ATCCTTCTATGGCGGAGCAGCCACTGCCTGCCTACCTGACCCCAATTCGC
AACATCGCTCCGACATGCACGCTGGACGCCATTTTGTTGGATTTTCTTCA
TAATCGACAGCACCAAGCAGCGAAAGGGGTATCAAAGCAGAGCCTAGTCG
GACCTTCTTATCCTAGCGTCTCGTCCCTTCTCAACCCAGAGAAAAGCGTT
TACTCGCATCCCTTGTCGAAAGTGTTCACCGACATCCTGCGGACCTTTCC
GGATATATCCACTCTCCCTGAACAAGTGGCCGTGCTGTTTCTCATGTTCC
TCCTCATGCGGTGGCAGATTTATCCGACCCCTGAAAATTATGACCGGTTG
CCCGAGTGGCTCACTCCTCGCCCGTCGCAGCTTCTCACGGCCCATCCAGC
TTGGATTGACTATCTGCCATGGCCGCGGATGCGAGATCGCCTGGTGATGT
CGTATCAGGACTACCCCTTTGAGAACTGGTTCATTCCCTTCACACGCACC
CTGTCTGTGAATTGGCCATACGAAGCGACAGACTGCCTTTTGTCTTCCGG
TGACGGTGACGAGCTTATGGTTAACCCTGTCTTTGAAAGACACTTCCGCA
ATCTCGGTAACTGGTCGCTGGGGCCCGCTTTTGCGGAAGCCTATCCTTCC
TTGGTCGAAACCACAAGGATTAAAACTTCACACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012315-T1.utr5p1 | KJC3_012315-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021833 |
| DBxref | PFAM:PF11905 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3209148..3211530 + |
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