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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3213756..3215972+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012317-T2 ID=KJC3_012317-T2|Name=KJC3_012317-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2217bp|location=Sequence derived from alignment at ch8:3213756..3215972+ (Aspergillus niger KJC3)
CTTACTCCGTAGTTACTACTTTACTACTAACTGCTTCCCAACCCCGTCCA
GCCTACCGCTCTCTGGACGTCATCTCCCATGCTCCTTTTGTTTTTACCCC
TCCGGAATTGATTAATCTCTTGCAAACTCTCTCAATCTACATCCCTTCAC
CATGGCTGACATGCCCATTGGTATGTTTATGCGTGTTCCCCCTCCTCTTC
CTTACCTTCATCTTCCCTTACCCCCTCCCCGAGTTCTCCTTGTCGGTGCC
TGTCCCTCCCGTGCTTCCCAGCTAACCAACCACGCCCCCCAGTGCTCGAC
GGAGGAACTGGTTTCCTCAAGGTCGGATATGCTGCGCAGGTCTGTCATCA
CCTCCCATCCCATTGCGTACTCTTACTTACCTCCTCTTCTTCCCCATGGA
TAGAACTTCCCCGAGCACCAGTTCCCCTCGATAGTGGGGCGGCCCATATT
GCGAACGGAGGAGCAGGCCGGCGACATTGTCGTCAAGGATATCATGTGCG
GAGATGAAGCTGCTGCTGCCAGATCTATGCTGCAAATCACCTACCCTGTA
CGTCATTTACATTCGCGTGCCTTCGTTCTCCCCCCACCCCCGATCGCTCC
ATTGTCTCCCCGGAGGTGTGGCAGACGTGTTAACGTTGGGCCCGACTTGG
TATACAGATGGAGAATGGTATCGTGAAGAGATGGGACGACATGCAACACC
TATGGAACTACACCTTTTACGAGAAGATGAAGATCGATCCTACGGGCCGC
AAGATCCTCTTGACCGAACCCCCCATGAATCCCCTGAAGAACCGGGAGCA
AATGGCTGAGGTTATGCTGGAAGGCTACAACTTTGGAGGTGTATACGTTG
CTATTCAAGCTGTGCTTGCACTATACGCTCAGGGTAAGTCTTGCACGCTT
CATATCCTCTCTCTTATCCCGCAGCTCTGATCGCCCGCTCTTTCGCAATC
CACAGGTCTCAGCAGTGGTGTGGTCGTTGACTCCGGTGACGGTGTCACCC
ACATTATCCCCGTCTACGAATCCACAGTTCTTAACCACCACATTCGCCGG
CTTGATGTCGCCGGTCGTGATGTCACCCGTAACCTCATCGCCCTCCTGCT
CCGTCGCGGTTATGCCTTGAACCGTACCGCCGATTTCGAAACCGTGCGCC
AGATCAAGGAGAAGCTCTGCTATGTGTCCTACGATCTCGAGTTGGACAAG
AAGCTCTCCGAAGACACAACCGTCCTTGTCGAGTCCTACACCCTTCCCGA
TGGTCGCGTCATCCGCGTCGGCAGCGAGCGCTTTGAAGCCCCCGAATGCC
TCTTCCAGCCGCACCTGGTGGATGTTGATCAGCCCGGTATCGCCGAGTTG
CTCTTCAACACCATCCAGGGCGCCGATGTCGATGTGCGCTCCAGTCTCTA
CAAGGCTATTGTGCTCAGTGGAGGAAGCAGCATGTACCCCGGTCTGCCTT
CCCGGTTGGAGAAGGAGCTCAAGCAATTGTGGCTCACACGGGTCCTGCAA
GGCAACCCGGAGAGGTTGAACGTACGTGTTCTCATTCACTGGCGGACCAT
ACCCCCCCCAGAAGAAATCAACAGCTAATTCCATGATACAGAAGTTCAAG
GTGCGCATCGAGGACCCCCCGCGACGAAGACACATGGTCTTCCTGGGAGG
TGCCGTCCTCGCCAACCTGGTAAGCTTCGTCACTTCTTCCCTCCTTCCCC
TGTACACCCGTTTTCCAGTTCGAAAATCACACCATAGCTAACATAATTAC
CTAGATTGCCGACAAGGAGGACATGTGGGTTACCAAGCAAGAGTGGCAGG
AACAGGGTGCACGTGCCCTGGCCAAACTCGGCCCTAGATAGTTTTTCTCT
TTCATTCAGTACATACGTTGTATATTTCATTTCAACCTGACCTACCACCT
ATTACTACCTACCATCTATCGGGAGTTCTTCGCCCTCCTTGCGAGTTGAA
CCAAAACGCCTCCATCTTACGCATTCCCCGAGCAGCCTCTGTCCCCACCC
CCTCCTTCCTTACCCAGATGCTCTATTCTCATAGCTCCCGTCTTTTGTTC
AAATACTACGTACATACTATTACAGGTTTTTCTGGTGTGTCGGGGAGATC
AAGTGAAGTAAGGTCCGGCTTGAAGTCATGTCATCTAGTATGTAAACAAA
GAAGGGATCGAACTTCAGCTGTCTTGTATGTTTACTTCTTGTCATATCTA
ACTGCTCATTACGCCAC back to topCoding sequence (CDS) from alignment at ch8:3213756..3215972+ >KJC3_012317-T2 ID=KJC3_012317-T2|Name=KJC3_012317-T2|organism=Aspergillus niger KJC3|type=CDS|length=5055bp|location=Sequence derived from alignment at ch8:3213756..3215972+ (Aspergillus niger KJC3)
ATGTGCGGAGATGAAGCTGCTGCTGCCAGATCTATGCTGCAAATCACCTA
CCCTATGGAGAATGGTATCGTGAAGAGATGGGACGACATGCAACACCTAT
GGAACTACACCTTTTACGAGAAGATGAAGATCGATCCTACGGGCCGCAAG
ATCCTCTTGACCGAACCCCCCATGAATCCCCTGAAGAACCGGGAGCAAAT
GGCTGAGGTTATGCTGGAAGGCTACAACTTTGGAGGTGTATACGTTGCTA
TTCAAGCTGTGCTTGCACTATACGCTCAGGGTCTCAGCAGTGGTGTGGTC
GTTGACTCCGGTGACGGTGTCACCCACATTATCCCCGTCTACGAATCCAC
AGTTCTTAACCACCACATTCGCCGGCTTGATGTCGCCGGTCGTGATGTCA
CCCGTAACCTCATCGCCCTCCTGCTCCGTCGCGGTTATGCCTTGAACCGT
ACCGCCGATTTCGAAACCGTGCGCCAGATCAAGGAGAAGCTCTGCTATGT
GTCCTACGATCTCGAGTTGGACAAGAAGCTCTCCGAAGACACAACCGTCC
TTGTCGAGTCCTACACCCTTCCCGATGGTCGCGTCATCCGCGTCGGCAGC
GAGCGCTTTGAAGCCCCCGAATGCCTCTTCCAGCCGCACCTGGTGGATGT
TGATCAGCCCGGTATCGCCGAGTTGCTCTTCAACACCATCCAGGGCGCCG
ATGTCGATGTGCGCTCCAGTCTCTACAAGGCTATTGTGCTCAGTGGAGGA
AGCAGCATGTACCCCGGTCTGCCTTCCCGGTTGGAGAAGGAGCTCAAGCA
ATTGTGGCTCACACGGGTCCTGCAAGGCAACCCGGAGAGGTTGAACAAGT
TCAAGGTGCGCATCGAGGACCCCCCGCGACGAAGACACATGGTCTTCCTG
GGAGGTGCCGTCCTCGCCAACCTGATTGCCGACAAGGAGGACATGTGGGT
TACCAAGCAAGAGTGGCAGGAACAGGGTGCACGTGCCCTGGCCAAACTCG
GCCCTAGATAGATGTGCGGAGATGAAGCTGCTGCTGCCAGATCTATGCTG
CAAATCACCTACCCTATGGAGAATGGTATCGTGAAGAGATGGGACGACAT
GCAACACCTATGGAACTACACCTTTTACGAGAAGATGAAGATCGATCCTA
CGGGCCGCAAGATCCTCTTGACCGAACCCCCCATGAATCCCCTGAAGAAC
CGGGAGCAAATGGCTGAGGTTATGCTGGAAGGCTACAACTTTGGAGGTGT
ATACGTTGCTATTCAAGCTGTGCTTGCACTATACGCTCAGGGTCTCAGCA
GTGGTGTGGTCGTTGACTCCGGTGACGGTGTCACCCACATTATCCCCGTC
TACGAATCCACAGTTCTTAACCACCACATTCGCCGGCTTGATGTCGCCGG
TCGTGATGTCACCCGTAACCTCATCGCCCTCCTGCTCCGTCGCGGTTATG
CCTTGAACCGTACCGCCGATTTCGAAACCGTGCGCCAGATCAAGGAGAAG
CTCTGCTATGTGTCCTACGATCTCGAGTTGGACAAGAAGCTCTCCGAAGA
CACAACCGTCCTTGTCGAGTCCTACACCCTTCCCGATGGTCGCGTCATCC
GCGTCGGCAGCGAGCGCTTTGAAGCCCCCGAATGCCTCTTCCAGCCGCAC
CTGGTGGATGTTGATCAGCCCGGTATCGCCGAGTTGCTCTTCAACACCAT
CCAGGGCGCCGATGTCGATGTGCGCTCCAGTCTCTACAAGGCTATTGTGC
TCAGTGGAGGAAGCAGCATGTACCCCGGTCTGCCTTCCCGGTTGGAGAAG
GAGCTCAAGCAATTGTGGCTCACACGGGTCCTGCAAGGCAACCCGGAGAG
GTTGAACAAGTTCAAGGTGCGCATCGAGGACCCCCCGCGACGAAGACACA
TGGTCTTCCTGGGAGGTGCCGTCCTCGCCAACCTGATTGCCGACAAGGAG
GACATGTGGGTTACCAAGCAAGAGTGGCAGGAACAGGGTGCACGTGCCCT
GGCCAAACTCGGCCCTAGATAGATGTGCGGAGATGAAGCTGCTGCTGCCA
GATCTATGCTGCAAATCACCTACCCTATGGAGAATGGTATCGTGAAGAGA
TGGGACGACATGCAACACCTATGGAACTACACCTTTTACGAGAAGATGAA
GATCGATCCTACGGGCCGCAAGATCCTCTTGACCGAACCCCCCATGAATC
CCCTGAAGAACCGGGAGCAAATGGCTGAGGTTATGCTGGAAGGCTACAAC
TTTGGAGGTGTATACGTTGCTATTCAAGCTGTGCTTGCACTATACGCTCA
GGGTCTCAGCAGTGGTGTGGTCGTTGACTCCGGTGACGGTGTCACCCACA
TTATCCCCGTCTACGAATCCACAGTTCTTAACCACCACATTCGCCGGCTT
GATGTCGCCGGTCGTGATGTCACCCGTAACCTCATCGCCCTCCTGCTCCG
TCGCGGTTATGCCTTGAACCGTACCGCCGATTTCGAAACCGTGCGCCAGA
TCAAGGAGAAGCTCTGCTATGTGTCCTACGATCTCGAGTTGGACAAGAAG
CTCTCCGAAGACACAACCGTCCTTGTCGAGTCCTACACCCTTCCCGATGG
TCGCGTCATCCGCGTCGGCAGCGAGCGCTTTGAAGCCCCCGAATGCCTCT
TCCAGCCGCACCTGGTGGATGTTGATCAGCCCGGTATCGCCGAGTTGCTC
TTCAACACCATCCAGGGCGCCGATGTCGATGTGCGCTCCAGTCTCTACAA
GGCTATTGTGCTCAGTGGAGGAAGCAGCATGTACCCCGGTCTGCCTTCCC
GGTTGGAGAAGGAGCTCAAGCAATTGTGGCTCACACGGGTCCTGCAAGGC
AACCCGGAGAGGTTGAACAAGTTCAAGGTGCGCATCGAGGACCCCCCGCG
ACGAAGACACATGGTCTTCCTGGGAGGTGCCGTCCTCGCCAACCTGATTG
CCGACAAGGAGGACATGTGGGTTACCAAGCAAGAGTGGCAGGAACAGGGT
GCACGTGCCCTGGCCAAACTCGGCCCTAGATAGATGTGCGGAGATGAAGC
TGCTGCTGCCAGATCTATGCTGCAAATCACCTACCCTATGGAGAATGGTA
TCGTGAAGAGATGGGACGACATGCAACACCTATGGAACTACACCTTTTAC
GAGAAGATGAAGATCGATCCTACGGGCCGCAAGATCCTCTTGACCGAACC
CCCCATGAATCCCCTGAAGAACCGGGAGCAAATGGCTGAGGTTATGCTGG
AAGGCTACAACTTTGGAGGTGTATACGTTGCTATTCAAGCTGTGCTTGCA
CTATACGCTCAGGGTCTCAGCAGTGGTGTGGTCGTTGACTCCGGTGACGG
TGTCACCCACATTATCCCCGTCTACGAATCCACAGTTCTTAACCACCACA
TTCGCCGGCTTGATGTCGCCGGTCGTGATGTCACCCGTAACCTCATCGCC
CTCCTGCTCCGTCGCGGTTATGCCTTGAACCGTACCGCCGATTTCGAAAC
CGTGCGCCAGATCAAGGAGAAGCTCTGCTATGTGTCCTACGATCTCGAGT
TGGACAAGAAGCTCTCCGAAGACACAACCGTCCTTGTCGAGTCCTACACC
CTTCCCGATGGTCGCGTCATCCGCGTCGGCAGCGAGCGCTTTGAAGCCCC
CGAATGCCTCTTCCAGCCGCACCTGGTGGATGTTGATCAGCCCGGTATCG
CCGAGTTGCTCTTCAACACCATCCAGGGCGCCGATGTCGATGTGCGCTCC
AGTCTCTACAAGGCTATTGTGCTCAGTGGAGGAAGCAGCATGTACCCCGG
TCTGCCTTCCCGGTTGGAGAAGGAGCTCAAGCAATTGTGGCTCACACGGG
TCCTGCAAGGCAACCCGGAGAGGTTGAACAAGTTCAAGGTGCGCATCGAG
GACCCCCCGCGACGAAGACACATGGTCTTCCTGGGAGGTGCCGTCCTCGC
CAACCTGATTGCCGACAAGGAGGACATGTGGGTTACCAAGCAAGAGTGGC
AGGAACAGGGTGCACGTGCCCTGGCCAAACTCGGCCCTAGATAGATGTGC
GGAGATGAAGCTGCTGCTGCCAGATCTATGCTGCAAATCACCTACCCTAT
GGAGAATGGTATCGTGAAGAGATGGGACGACATGCAACACCTATGGAACT
ACACCTTTTACGAGAAGATGAAGATCGATCCTACGGGCCGCAAGATCCTC
TTGACCGAACCCCCCATGAATCCCCTGAAGAACCGGGAGCAAATGGCTGA
GGTTATGCTGGAAGGCTACAACTTTGGAGGTGTATACGTTGCTATTCAAG
CTGTGCTTGCACTATACGCTCAGGGTCTCAGCAGTGGTGTGGTCGTTGAC
TCCGGTGACGGTGTCACCCACATTATCCCCGTCTACGAATCCACAGTTCT
TAACCACCACATTCGCCGGCTTGATGTCGCCGGTCGTGATGTCACCCGTA
ACCTCATCGCCCTCCTGCTCCGTCGCGGTTATGCCTTGAACCGTACCGCC
GATTTCGAAACCGTGCGCCAGATCAAGGAGAAGCTCTGCTATGTGTCCTA
CGATCTCGAGTTGGACAAGAAGCTCTCCGAAGACACAACCGTCCTTGTCG
AGTCCTACACCCTTCCCGATGGTCGCGTCATCCGCGTCGGCAGCGAGCGC
TTTGAAGCCCCCGAATGCCTCTTCCAGCCGCACCTGGTGGATGTTGATCA
GCCCGGTATCGCCGAGTTGCTCTTCAACACCATCCAGGGCGCCGATGTCG
ATGTGCGCTCCAGTCTCTACAAGGCTATTGTGCTCAGTGGAGGAAGCAGC
ATGTACCCCGGTCTGCCTTCCCGGTTGGAGAAGGAGCTCAAGCAATTGTG
GCTCACACGGGTCCTGCAAGGCAACCCGGAGAGGTTGAACAAGTTCAAGG
TGCGCATCGAGGACCCCCCGCGACGAAGACACATGGTCTTCCTGGGAGGT
GCCGTCCTCGCCAACCTGATTGCCGACAAGGAGGACATGTGGGTTACCAA
GCAAGAGTGGCAGGAACAGGGTGCACGTGCCCTGGCCAAACTCGGCCCTA
GATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012317-T2.utr3p1 | KJC3_012317-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR043129 |
| DBxref | InterPro:IPR020902 |
| DBxref | InterPro:IPR004000 |
| DBxref | PFAM:PF00022 |
| Product | variant 2 |
| Product | actin nucleation center |
| Product | Arp2/3 complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3213756..3215972 + |
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