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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3243396..3244887+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012327-T1 ID=KJC3_012327-T1|Name=KJC3_012327-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1492bp|location=Sequence derived from alignment at ch8:3243396..3244887+ (Aspergillus niger KJC3)
GGCGAAACCGAAAATTCCCCAAATCCTTAACTGAATTCAGACAACATATC
CTAACAATCAATGTAAGATATAAATCACAAAAACCACAACCTCTTCAAAA
ATGGCACCTCGATCCAGCAACACATCCAAAAAACCCAACAAAAAGGAGAG
TAGTAAAAAGAAGCTGTCCTCTTCCTCACAAACACAACCGCGCCGAAACA
CCAGCAAAACCGAACCCAACCATCATCAAGATCACCTCAACCTCTCCACC
ACCATCCCGCTGACTCTCCAGCAACTGTTACTAAATGTGTTCAAAACTGC
TTTGCTCACAAACGGGCACAATTATCTCCATAACCGGGAGGAGACGAAGA
AGAACGACAATGATGAATCCGGAGCCACCACTGCTGATTCAGCAGAGCAA
CAGCAGGAACAGCAGCAACTAGACATCAAAAGTCTGATCCAGACGATCAA
AACCCATTTGTATAATCGTGACTTTGACTCCGCTTTTACAGATGCCAATG
AGGACTTGCTTCGTGCTTATGCATTGCGGTGGAGCTCGTCCAGGGCGTTG
GGGTATGCGGGCATCTTTCGCGCGCTGTTGAGGGAGGTGGTTAAGCCTGT
TTCTGACCATGCTGCTACTACTTCTACGAATAATGTCGTGTGTATTGGAG
GTGGCGCGGGTGCTGAGATTGTTGCGCTTGCGGCTGCGTGGAGGGATTTT
ATGGTTGGTGCTGAACTACGATCTTCTTCTGCAAGAGATGAGGATCAAAT
TGCAGATGCTGTTGAGGCGGTATCTTTGGACGATGGGAAAGAAGAAGAAG
GTAGCAAAGAAGCAGTAAAACAACCAACTTCCACCACCACTTCTACTACT
ACTACCACCTACCCCGGCCTCTCCGTCACGGCGGTAGACATCGCAGACTG
GTCAAAGGTAGTTGAGCGCTTATCCACCGCTATTCAATCTCCCACAGTGA
CAGGGTCAAAGTCGCATCCTGCTCCATTGTTACCCTCCAACAAAGACGAA
GAAAAGAAGACACCCAGCTTCAGCGTTGGCTTTGAGAAGCTAGATGTTCT
CTCCACGGGGGAGAAGGAACTTCAGGGATTATTCTCGCGGCAGGGAGCGG
AATCATGCTCTACTGTCCTGGTAACGTTGATGTTCACTTTGAATGAACTG
TTCTCGACATCTATGGCCAAGGCTACAGGGTTTTTGTTGCGCATGACGGA
CATGTTGCGGCCTGGAACGGTGCTGCTTGTGGTGGATAGCCCCGGGAGTT
ATTCGACGCTGAAGTTGGGCAAGGGTGGTGATGGGGAAGTGCGGGAGAGA
CAGTATCCGATGAAGTTCTTGTTGGATCATACGCTGCTGTCGGTGGCGGA
GGGCAAGTGGGAACGGTTGATGTCGGAGGATTCGAGGTGGTGGAGGAGGG
ATGCGGCCAGGTTGAGGTATGATGTTGGGGAGGGGGCTGGGCTGGAGGAT
ATGAGGTTTCAGGTTCATGTTTATCGGAGGGTGGGGGTGTAG back to topCoding sequence (CDS) from alignment at ch8:3243396..3244887+ >KJC3_012327-T1 ID=KJC3_012327-T1|Name=KJC3_012327-T1|organism=Aspergillus niger KJC3|type=CDS|length=1392bp|location=Sequence derived from alignment at ch8:3243396..3244887+ (Aspergillus niger KJC3)
ATGGCACCTCGATCCAGCAACACATCCAAAAAACCCAACAAAAAGGAGAG
TAGTAAAAAGAAGCTGTCCTCTTCCTCACAAACACAACCGCGCCGAAACA
CCAGCAAAACCGAACCCAACCATCATCAAGATCACCTCAACCTCTCCACC
ACCATCCCGCTGACTCTCCAGCAACTGTTACTAAATGTGTTCAAAACTGC
TTTGCTCACAAACGGGCACAATTATCTCCATAACCGGGAGGAGACGAAGA
AGAACGACAATGATGAATCCGGAGCCACCACTGCTGATTCAGCAGAGCAA
CAGCAGGAACAGCAGCAACTAGACATCAAAAGTCTGATCCAGACGATCAA
AACCCATTTGTATAATCGTGACTTTGACTCCGCTTTTACAGATGCCAATG
AGGACTTGCTTCGTGCTTATGCATTGCGGTGGAGCTCGTCCAGGGCGTTG
GGGTATGCGGGCATCTTTCGCGCGCTGTTGAGGGAGGTGGTTAAGCCTGT
TTCTGACCATGCTGCTACTACTTCTACGAATAATGTCGTGTGTATTGGAG
GTGGCGCGGGTGCTGAGATTGTTGCGCTTGCGGCTGCGTGGAGGGATTTT
ATGGTTGGTGCTGAACTACGATCTTCTTCTGCAAGAGATGAGGATCAAAT
TGCAGATGCTGTTGAGGCGGTATCTTTGGACGATGGGAAAGAAGAAGAAG
GTAGCAAAGAAGCAGTAAAACAACCAACTTCCACCACCACTTCTACTACT
ACTACCACCTACCCCGGCCTCTCCGTCACGGCGGTAGACATCGCAGACTG
GTCAAAGGTAGTTGAGCGCTTATCCACCGCTATTCAATCTCCCACAGTGA
CAGGGTCAAAGTCGCATCCTGCTCCATTGTTACCCTCCAACAAAGACGAA
GAAAAGAAGACACCCAGCTTCAGCGTTGGCTTTGAGAAGCTAGATGTTCT
CTCCACGGGGGAGAAGGAACTTCAGGGATTATTCTCGCGGCAGGGAGCGG
AATCATGCTCTACTGTCCTGGTAACGTTGATGTTCACTTTGAATGAACTG
TTCTCGACATCTATGGCCAAGGCTACAGGGTTTTTGTTGCGCATGACGGA
CATGTTGCGGCCTGGAACGGTGCTGCTTGTGGTGGATAGCCCCGGGAGTT
ATTCGACGCTGAAGTTGGGCAAGGGTGGTGATGGGGAAGTGCGGGAGAGA
CAGTATCCGATGAAGTTCTTGTTGGATCATACGCTGCTGTCGGTGGCGGA
GGGCAAGTGGGAACGGTTGATGTCGGAGGATTCGAGGTGGTGGAGGAGGG
ATGCGGCCAGGTTGAGGTATGATGTTGGGGAGGGGGCTGGGCTGGAGGAT
ATGAGGTTTCAGGTTCATGTTTATCGGAGGGTGGGGGTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012327-T1.utr5p1 | KJC3_012327-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021463 |
| DBxref | PFAM:PF11312 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3243396..3244887 + |
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