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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3245015..3246150- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012328-T1 ID=KJC3_012328-T1|Name=KJC3_012328-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1136bp|location=Sequence derived from alignment at ch8:3245015..3246150- (Aspergillus niger KJC3)
ATGTCTACCTTCCTCCAGCAGATCTACCGCCTCGCGGTTCCCATCTCGGC
GGGAGTCTACATCTTCAACTCCTCCATTTACGATGTTCGTGGTGGTACCC
GCGCTGTCATCTTCGACCGATTGTCCGGAGTGCAGGAGAAGGTCATGAAC
GAGGGCACACACTTCCTCATCCCTTGGTTGCAGCGAGCTATTATCTATGA
TGTTCGCACCAAGCCCCGCAACATTTCCACCACCACGGGTAGTAAGGACT
TGCAGATGGTCAGCTTGACTCTGCGTGTGCTGCACCGTCCTGAGGTCCCG
AAGCTGCCGGCCATCTACCAGGTAAGATGCCTGTGCCCTTTTTATACCCG
ACTGGGTCCATTCCCTCTAACCATGACTCTCCCAAATAGTCCTACGGTAT
CGACTACGATGAGCGTGTGCTCCCATCCATCGGAAACGAAGTTCTCAAAG
CCATTGTCGCTCAGTTCGATGCCGCCGAACTGATCACCCAGCGTGAAGCT
GTCTCCAACCGCATCCGCACAGACCTCATGAAGAGAGCTTCTCAGTTCAA
CATCGCCCTTGAGGACGTCTCCATTACCCACATGACCTTCGGAAAGGAAT
TCACCCGTGCCGTCGAGCAGAAGCAGATCGCCCAGCAGGACGCCGAGCGG
GCCCGTTTCATTGTCGAGAGGGCCGAGCAGGAACGTCAGGCCAATGTCAT
CCGCGCCGAGGGTGAAGCCGAGAGTGCCGATATTATCAGCAAGGCTGTTG
CCAAGGCGGGCAGCGGCTTGATTGAGATTCGTCGTATCGATGCCAGCAAG
GAGATCGCGACGACGCTTGCCAACAACCCCAACGTCACGTATCTGCCTGG
TAACGATGGCAAGGAAGGCGGAAAGAGCACTAGCCTCTTGCTGGGCTTGA
GAAACTAGAAGGCGCTGTGGCTTGGTAAATGGAATTACGTGTATTTCTTA
TTTCTCTTTTCTTTGTTGTTTTCCTTCAACCGGATGGATCTCAGGCGTGC
ATGATCTCCGTGGCGAATTAATGTCGTTTGGTCTTCTTTCTTCATCACTT
CCTCTCTTACACACCCTCTCGCACGCATGCACTCCTACACGCATGAACCT
GTAGCAATATCATACCCATTCCTCTCTCAAATATGC back to topCoding sequence (CDS) from alignment at ch8:3245015..3246150- >KJC3_012328-T1 ID=KJC3_012328-T1|Name=KJC3_012328-T1|organism=Aspergillus niger KJC3|type=CDS|length=1680bp|location=Sequence derived from alignment at ch8:3245015..3246150- (Aspergillus niger KJC3)
TCCTACGGTATCGACTACGATGAGCGTGTGCTCCCATCCATCGGAAACGA
AGTTCTCAAAGCCATTGTCGCTCAGTTCGATGCCGCCGAACTGATCACCC
AGCGTGAAGCTGTCTCCAACCGCATCCGCACAGACCTCATGAAGAGAGCT
TCTCAGTTCAACATCGCCCTTGAGGACGTCTCCATTACCCACATGACCTT
CGGAAAGGAATTCACCCGTGCCGTCGAGCAGAAGCAGATCGCCCAGCAGG
ACGCCGAGCGGGCCCGTTTCATTGTCGAGAGGGCCGAGCAGGAACGTCAG
GCCAATGTCATCCGCGCCGAGGGTGAAGCCGAGAGTGCCGATATTATCAG
CAAGGCTGTTGCCAAGGCGGGCAGCGGCTTGATTGAGATTCGTCGTATCG
ATGCCAGCAAGGAGATCGCGACGACGCTTGCCAACAACCCCAACGTCACG
TATCTGCCTGGTAACGATGGCAAGGAAGGCGGAAAGAGCACTAGCCTCTT
GCTGGGCTTGAGAAACTAGATGTCTACCTTCCTCCAGCAGATCTACCGCC
TCGCGGTTCCCATCTCGGCGGGAGTCTACATCTTCAACTCCTCCATTTAC
GATGTTCGTGGTGGTACCCGCGCTGTCATCTTCGACCGATTGTCCGGAGT
GCAGGAGAAGGTCATGAACGAGGGCACACACTTCCTCATCCCTTGGTTGC
AGCGAGCTATTATCTATGATGTTCGCACCAAGCCCCGCAACATTTCCACC
ACCACGGGTAGTAAGGACTTGCAGATGGTCAGCTTGACTCTGCGTGTGCT
GCACCGTCCTGAGGTCCCGAAGCTGCCGGCCATCTACCAGTCCTACGGTA
TCGACTACGATGAGCGTGTGCTCCCATCCATCGGAAACGAAGTTCTCAAA
GCCATTGTCGCTCAGTTCGATGCCGCCGAACTGATCACCCAGCGTGAAGC
TGTCTCCAACCGCATCCGCACAGACCTCATGAAGAGAGCTTCTCAGTTCA
ACATCGCCCTTGAGGACGTCTCCATTACCCACATGACCTTCGGAAAGGAA
TTCACCCGTGCCGTCGAGCAGAAGCAGATCGCCCAGCAGGACGCCGAGCG
GGCCCGTTTCATTGTCGAGAGGGCCGAGCAGGAACGTCAGGCCAATGTCA
TCCGCGCCGAGGGTGAAGCCGAGAGTGCCGATATTATCAGCAAGGCTGTT
GCCAAGGCGGGCAGCGGCTTGATTGAGATTCGTCGTATCGATGCCAGCAA
GGAGATCGCGACGACGCTTGCCAACAACCCCAACGTCACGTATCTGCCTG
GTAACGATGGCAAGGAAGGCGGAAAGAGCACTAGCCTCTTGCTGGGCTTG
AGAAACTAGATGTCTACCTTCCTCCAGCAGATCTACCGCCTCGCGGTTCC
CATCTCGGCGGGAGTCTACATCTTCAACTCCTCCATTTACGATGTTCGTG
GTGGTACCCGCGCTGTCATCTTCGACCGATTGTCCGGAGTGCAGGAGAAG
GTCATGAACGAGGGCACACACTTCCTCATCCCTTGGTTGCAGCGAGCTAT
TATCTATGATGTTCGCACCAAGCCCCGCAACATTTCCACCACCACGGGTA
GTAAGGACTTGCAGATGGTCAGCTTGACTCTGCGTGTGCTGCACCGTCCT
GAGGTCCCGAAGCTGCCGGCCATCTACCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012328-T1.utr3p1 | KJC3_012328-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036013 |
| DBxref | InterPro:IPR001107 |
| DBxref | InterPro:IPR000163 |
| DBxref | PFAM:PF01145 |
| Product | subunit of the prohibitin complex (Phb1p-Phb2p) |
| Product | Prohibitin-1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3245015..3246150 - |
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