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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3261443..3263852- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012334-T1 ID=KJC3_012334-T1|Name=KJC3_012334-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2410bp|location=Sequence derived from alignment at ch8:3261443..3263852- (Aspergillus niger KJC3)
GCTGCAGCATGCACGCTTTATAGTGTTCGTATGCAATTGCTACGATAAAA
GTAACACCCAGTAACTGAAGCTTGGCAAGATGAAACACGAATATTATCCG
ATCGAGACGCTTCCCTCCTGGATCAAGCTCAACGGAGTCTCCGTCAACGG
TATCGCTTTCCGCAAATTGCAAGCAGATGATGGAACCGACAAGGGGTCTG
CAATTGTTGGAACTGAGGTGAAATCTACCGGAAATGCAGAGGGGAGTGAG
GTAGAGCCGGAGGTACTTCTACGAGTGCCGACCGATTTGGTACTGTCATT
TGATTTTGTTGAAGAATATTCCAAATCGGATAGACAACTCCGCGAGGTAT
TAGAGGCTGTCGGGGACTTCGGAAGAGTAGGTCTATTTCCTCATTGTACT
CCGATCTCGACCTAGCAGACACCATGTTTATGGCTTCTATGAGAGACGGA
TGAACTCGGGCTATTCCCATACTGATATGTACAGACAGCCAGGGGCGCCA
TATTAATCTTCCTTCTCGTCCAACTCACGCACTCTAGCCCAGATTATGCG
AGTGAGCGGCATCAGATTGGACTATCGAGCCCTTGGACCGAATATATGAA
GTACATGCCGCCTGCTATATCTTTACCTACTTTTTATAGTGAAGAGGAGC
TGGAGCTTTTGCGCGGGTCCTCGTTGAGGTTGGCTGTGCATGCGAAGATT
GCCTCTTTGGAGAAAGAATTCGAACACCTGCGTCGAAGTACAGAGGGCTT
GGACTGGTGTGAGAAGTATTGGTGGGACGAGGATACGGGGAAGCTGACGT
TCAACGATTGGAAATATGTCGATGCATTGTACCGGTCACGCATGGTAGAT
CTGCCTCGGCATGGACATGCAATGGTTCCGTGTATTGATATGGCAAATCA
TGCATCTGAGGGGACAGTCAAGGCGTTGTATGACGAGGATGCCGACGGGA
ATGCTGTGTTGCAGCTGCGGGAGGGACGGAGCTTGCGGGCTGATGAGGAG
GTTACGATCTCGTAAGTATTTATATTGACTACTACTTGTTGGTTGGATCT
GCTCAAGCTGATGGTATAAAGGTATGGCGACGAAAAGTCTGCCTCAGAAT
TGATCTTCTCATATGGATTCCTCGACGAGCATACCACGGACGCAAAGCAG
ATCTTCCTTGACCTGGACATCCCAGATGACGATCCCTTGAAGATAGCAAA
GAAAGCATTCTGCAAAGATACACCAGGAGTCAAGATATTAGCTACTTCCC
CCGACAGCTCAGAAACAGTCGCAGCAACAACCTGGGACAGCCCCATCATC
TGGTGGGCATGCGTAAACGAGGAGGACGGGCTGGACTTCAACGTTCTTCA
AACCAACGACGGCGGCAGGGAACTTAAAGCCACTTGGAACGGGCAAGAAG
TGAGCGACCCCGGCTGTCTCAGGGACCTCCTAGCCGCAGATCCCCGTTGG
GATATCTACCAGCTTCGTGCGGCGGTGCTCATCCTCGAGCGACTGGAGAC
CCAATTCTTCGTCCTCCGCCAAACCGACATGATGATTAGTGAGATCCGCG
AGAACGAAGACATGCGTGCTGTTTTCGACCCGTATGTGTTTCAGACAATC
TTAAGGTTACGAGAGCTGGAGTCCAAGCTTATGGAACAGGCAATCGAGGA
CCTCGTTAACCAGGTGCGTTGTGTGATAGTCCCGTCTCTCCCCGTTCGCT
ACCCCCTTACCCCATATCGTTAACCCCACACAAAATATCAAACATAACCA
AAAGATACTAATTGTCGATCCTTCAAACAACAGCGGGAAACTCTCATGTC
AAGCCCCGCAGTCAGCGCCTACCTGACGCAACAATCAGGGGACATCGAAG
AGGATTTCTCTTGAAAGTGAACTACGATCTTAAAAGTAACACCCACTTGC
TTACATCTAGTCTAGCTAGTTAGACATCTCGAACCCACTATAGCTATGAA
ACAATCTAGCCAAACCAAAAAAATCCCACCATCCGTCATCCGACCCTAAT
TAGTCGATAACTAAACGAGTATTAACTAGAATAGTCTCTGACTAACTGAC
TTTTCAGTACATCCCCCCTCTATCTACCTGCAACCAACCACTTAAACCAG
ACAAAAGACAACCCAACCCCATGCATGCCGATCCTTCATCAAAGTCCTAT
GTAGTAACTGGTTATAGTTTAAGTAATCTCGTATCAAACCCACTTAATAC
CCAACCCGTAACAACAGTAAAATAAACCTAACCATGGCCACAAAAACGTG
GAGGTACCAGTATTCCAAGCGCTCCCCCCGGAAGATCTGAGTTTGAGTGT
CTTACCCACCGCGGGGTAAGCGATCCTTCCAAACGAGAGCGGCGGTTGGT
TGGAAGAACTGACGAGAGAAGGATTTGGTAAACTCTAATACGATTTCTGG
GCAAATGCCA back to topCoding sequence (CDS) from alignment at ch8:3261443..3263852- >KJC3_012334-T1 ID=KJC3_012334-T1|Name=KJC3_012334-T1|organism=Aspergillus niger KJC3|type=CDS|length=5988bp|location=Sequence derived from alignment at ch8:3261443..3263852- (Aspergillus niger KJC3)
CGGGAAACTCTCATGTCAAGCCCCGCAGTCAGCGCCTACCTGACGCAACA
ATCAGGGGACATCGAAGAGGATTTCTCTTGAGTATGGCGACGAAAAGTCT
GCCTCAGAATTGATCTTCTCATATGGATTCCTCGACGAGCATACCACGGA
CGCAAAGCAGATCTTCCTTGACCTGGACATCCCAGATGACGATCCCTTGA
AGATAGCAAAGAAAGCATTCTGCAAAGATACACCAGGAGTCAAGATATTA
GCTACTTCCCCCGACAGCTCAGAAACAGTCGCAGCAACAACCTGGGACAG
CCCCATCATCTGGTGGGCATGCGTAAACGAGGAGGACGGGCTGGACTTCA
ACGTTCTTCAAACCAACGACGGCGGCAGGGAACTTAAAGCCACTTGGAAC
GGGCAAGAAGTGAGCGACCCCGGCTGTCTCAGGGACCTCCTAGCCGCAGA
TCCCCGTTGGGATATCTACCAGCTTCGTGCGGCGGTGCTCATCCTCGAGC
GACTGGAGACCCAATTCTTCGTCCTCCGCCAAACCGACATGATGATTAGT
GAGATCCGCGAGAACGAAGACATGCGTGCTGTTTTCGACCCGTATGTGTT
TCAGACAATCTTAAGGTTACGAGAGCTGGAGTCCAAGCTTATGGAACAGG
CAATCGAGGACCTCGTTAACCAGACAGCCAGGGGCGCCATATTAATCTTC
CTTCTCGTCCAACTCACGCACTCTAGCCCAGATTATGCGAGTGAGCGGCA
TCAGATTGGACTATCGAGCCCTTGGACCGAATATATGAAGTACATGCCGC
CTGCTATATCTTTACCTACTTTTTATAGTGAAGAGGAGCTGGAGCTTTTG
CGCGGGTCCTCGTTGAGGTTGGCTGTGCATGCGAAGATTGCCTCTTTGGA
GAAAGAATTCGAACACCTGCGTCGAAGTACAGAGGGCTTGGACTGGTGTG
AGAAGTATTGGTGGGACGAGGATACGGGGAAGCTGACGTTCAACGATTGG
AAATATGTCGATGCATTGTACCGGTCACGCATGGTAGATCTGCCTCGGCA
TGGACATGCAATGGTTCCGTGTATTGATATGGCAAATCATGCATCTGAGG
GGACAGTCAAGGCGTTGTATGACGAGGATGCCGACGGGAATGCTGTGTTG
CAGCTGCGGGAGGGACGGAGCTTGCGGGCTGATGAGGAGGTTACGATCTC
ATGAAACACGAATATTATCCGATCGAGACGCTTCCCTCCTGGATCAAGCT
CAACGGAGTCTCCGTCAACGGTATCGCTTTCCGCAAATTGCAAGCAGATG
ATGGAACCGACAAGGGGTCTGCAATTGTTGGAACTGAGGTGAAATCTACC
GGAAATGCAGAGGGGAGTGAGGTAGAGCCGGAGGTACTTCTACGAGTGCC
GACCGATTTGGTACTGTCATTTGATTTTGTTGAAGAATATTCCAAATCGG
ATAGACAACTCCGCGAGGTATTAGAGGCTGTCGGGGACTTCGGAAGACGG
GAAACTCTCATGTCAAGCCCCGCAGTCAGCGCCTACCTGACGCAACAATC
AGGGGACATCGAAGAGGATTTCTCTTGAGTATGGCGACGAAAAGTCTGCC
TCAGAATTGATCTTCTCATATGGATTCCTCGACGAGCATACCACGGACGC
AAAGCAGATCTTCCTTGACCTGGACATCCCAGATGACGATCCCTTGAAGA
TAGCAAAGAAAGCATTCTGCAAAGATACACCAGGAGTCAAGATATTAGCT
ACTTCCCCCGACAGCTCAGAAACAGTCGCAGCAACAACCTGGGACAGCCC
CATCATCTGGTGGGCATGCGTAAACGAGGAGGACGGGCTGGACTTCAACG
TTCTTCAAACCAACGACGGCGGCAGGGAACTTAAAGCCACTTGGAACGGG
CAAGAAGTGAGCGACCCCGGCTGTCTCAGGGACCTCCTAGCCGCAGATCC
CCGTTGGGATATCTACCAGCTTCGTGCGGCGGTGCTCATCCTCGAGCGAC
TGGAGACCCAATTCTTCGTCCTCCGCCAAACCGACATGATGATTAGTGAG
ATCCGCGAGAACGAAGACATGCGTGCTGTTTTCGACCCGTATGTGTTTCA
GACAATCTTAAGGTTACGAGAGCTGGAGTCCAAGCTTATGGAACAGGCAA
TCGAGGACCTCGTTAACCAGACAGCCAGGGGCGCCATATTAATCTTCCTT
CTCGTCCAACTCACGCACTCTAGCCCAGATTATGCGAGTGAGCGGCATCA
GATTGGACTATCGAGCCCTTGGACCGAATATATGAAGTACATGCCGCCTG
CTATATCTTTACCTACTTTTTATAGTGAAGAGGAGCTGGAGCTTTTGCGC
GGGTCCTCGTTGAGGTTGGCTGTGCATGCGAAGATTGCCTCTTTGGAGAA
AGAATTCGAACACCTGCGTCGAAGTACAGAGGGCTTGGACTGGTGTGAGA
AGTATTGGTGGGACGAGGATACGGGGAAGCTGACGTTCAACGATTGGAAA
TATGTCGATGCATTGTACCGGTCACGCATGGTAGATCTGCCTCGGCATGG
ACATGCAATGGTTCCGTGTATTGATATGGCAAATCATGCATCTGAGGGGA
CAGTCAAGGCGTTGTATGACGAGGATGCCGACGGGAATGCTGTGTTGCAG
CTGCGGGAGGGACGGAGCTTGCGGGCTGATGAGGAGGTTACGATCTCATG
AAACACGAATATTATCCGATCGAGACGCTTCCCTCCTGGATCAAGCTCAA
CGGAGTCTCCGTCAACGGTATCGCTTTCCGCAAATTGCAAGCAGATGATG
GAACCGACAAGGGGTCTGCAATTGTTGGAACTGAGGTGAAATCTACCGGA
AATGCAGAGGGGAGTGAGGTAGAGCCGGAGGTACTTCTACGAGTGCCGAC
CGATTTGGTACTGTCATTTGATTTTGTTGAAGAATATTCCAAATCGGATA
GACAACTCCGCGAGGTATTAGAGGCTGTCGGGGACTTCGGAAGACGGGAA
ACTCTCATGTCAAGCCCCGCAGTCAGCGCCTACCTGACGCAACAATCAGG
GGACATCGAAGAGGATTTCTCTTGAGTATGGCGACGAAAAGTCTGCCTCA
GAATTGATCTTCTCATATGGATTCCTCGACGAGCATACCACGGACGCAAA
GCAGATCTTCCTTGACCTGGACATCCCAGATGACGATCCCTTGAAGATAG
CAAAGAAAGCATTCTGCAAAGATACACCAGGAGTCAAGATATTAGCTACT
TCCCCCGACAGCTCAGAAACAGTCGCAGCAACAACCTGGGACAGCCCCAT
CATCTGGTGGGCATGCGTAAACGAGGAGGACGGGCTGGACTTCAACGTTC
TTCAAACCAACGACGGCGGCAGGGAACTTAAAGCCACTTGGAACGGGCAA
GAAGTGAGCGACCCCGGCTGTCTCAGGGACCTCCTAGCCGCAGATCCCCG
TTGGGATATCTACCAGCTTCGTGCGGCGGTGCTCATCCTCGAGCGACTGG
AGACCCAATTCTTCGTCCTCCGCCAAACCGACATGATGATTAGTGAGATC
CGCGAGAACGAAGACATGCGTGCTGTTTTCGACCCGTATGTGTTTCAGAC
AATCTTAAGGTTACGAGAGCTGGAGTCCAAGCTTATGGAACAGGCAATCG
AGGACCTCGTTAACCAGACAGCCAGGGGCGCCATATTAATCTTCCTTCTC
GTCCAACTCACGCACTCTAGCCCAGATTATGCGAGTGAGCGGCATCAGAT
TGGACTATCGAGCCCTTGGACCGAATATATGAAGTACATGCCGCCTGCTA
TATCTTTACCTACTTTTTATAGTGAAGAGGAGCTGGAGCTTTTGCGCGGG
TCCTCGTTGAGGTTGGCTGTGCATGCGAAGATTGCCTCTTTGGAGAAAGA
ATTCGAACACCTGCGTCGAAGTACAGAGGGCTTGGACTGGTGTGAGAAGT
ATTGGTGGGACGAGGATACGGGGAAGCTGACGTTCAACGATTGGAAATAT
GTCGATGCATTGTACCGGTCACGCATGGTAGATCTGCCTCGGCATGGACA
TGCAATGGTTCCGTGTATTGATATGGCAAATCATGCATCTGAGGGGACAG
TCAAGGCGTTGTATGACGAGGATGCCGACGGGAATGCTGTGTTGCAGCTG
CGGGAGGGACGGAGCTTGCGGGCTGATGAGGAGGTTACGATCTCATGAAA
CACGAATATTATCCGATCGAGACGCTTCCCTCCTGGATCAAGCTCAACGG
AGTCTCCGTCAACGGTATCGCTTTCCGCAAATTGCAAGCAGATGATGGAA
CCGACAAGGGGTCTGCAATTGTTGGAACTGAGGTGAAATCTACCGGAAAT
GCAGAGGGGAGTGAGGTAGAGCCGGAGGTACTTCTACGAGTGCCGACCGA
TTTGGTACTGTCATTTGATTTTGTTGAAGAATATTCCAAATCGGATAGAC
AACTCCGCGAGGTATTAGAGGCTGTCGGGGACTTCGGAAGACGGGAAACT
CTCATGTCAAGCCCCGCAGTCAGCGCCTACCTGACGCAACAATCAGGGGA
CATCGAAGAGGATTTCTCTTGAGTATGGCGACGAAAAGTCTGCCTCAGAA
TTGATCTTCTCATATGGATTCCTCGACGAGCATACCACGGACGCAAAGCA
GATCTTCCTTGACCTGGACATCCCAGATGACGATCCCTTGAAGATAGCAA
AGAAAGCATTCTGCAAAGATACACCAGGAGTCAAGATATTAGCTACTTCC
CCCGACAGCTCAGAAACAGTCGCAGCAACAACCTGGGACAGCCCCATCAT
CTGGTGGGCATGCGTAAACGAGGAGGACGGGCTGGACTTCAACGTTCTTC
AAACCAACGACGGCGGCAGGGAACTTAAAGCCACTTGGAACGGGCAAGAA
GTGAGCGACCCCGGCTGTCTCAGGGACCTCCTAGCCGCAGATCCCCGTTG
GGATATCTACCAGCTTCGTGCGGCGGTGCTCATCCTCGAGCGACTGGAGA
CCCAATTCTTCGTCCTCCGCCAAACCGACATGATGATTAGTGAGATCCGC
GAGAACGAAGACATGCGTGCTGTTTTCGACCCGTATGTGTTTCAGACAAT
CTTAAGGTTACGAGAGCTGGAGTCCAAGCTTATGGAACAGGCAATCGAGG
ACCTCGTTAACCAGACAGCCAGGGGCGCCATATTAATCTTCCTTCTCGTC
CAACTCACGCACTCTAGCCCAGATTATGCGAGTGAGCGGCATCAGATTGG
ACTATCGAGCCCTTGGACCGAATATATGAAGTACATGCCGCCTGCTATAT
CTTTACCTACTTTTTATAGTGAAGAGGAGCTGGAGCTTTTGCGCGGGTCC
TCGTTGAGGTTGGCTGTGCATGCGAAGATTGCCTCTTTGGAGAAAGAATT
CGAACACCTGCGTCGAAGTACAGAGGGCTTGGACTGGTGTGAGAAGTATT
GGTGGGACGAGGATACGGGGAAGCTGACGTTCAACGATTGGAAATATGTC
GATGCATTGTACCGGTCACGCATGGTAGATCTGCCTCGGCATGGACATGC
AATGGTTCCGTGTATTGATATGGCAAATCATGCATCTGAGGGGACAGTCA
AGGCGTTGTATGACGAGGATGCCGACGGGAATGCTGTGTTGCAGCTGCGG
GAGGGACGGAGCTTGCGGGCTGATGAGGAGGTTACGATCTCATGAAACAC
GAATATTATCCGATCGAGACGCTTCCCTCCTGGATCAAGCTCAACGGAGT
CTCCGTCAACGGTATCGCTTTCCGCAAATTGCAAGCAGATGATGGAACCG
ACAAGGGGTCTGCAATTGTTGGAACTGAGGTGAAATCTACCGGAAATGCA
GAGGGGAGTGAGGTAGAGCCGGAGGTACTTCTACGAGTGCCGACCGATTT
GGTACTGTCATTTGATTTTGTTGAAGAATATTCCAAATCGGATAGACAAC
TCCGCGAGGTATTAGAGGCTGTCGGGGACTTCGGAAGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012334-T1.utr3p1 | KJC3_012334-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012334-T1.utr5p1 | KJC3_012334-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3261443..3263852 - |
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