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KJC3_012340-T1, KJC3_012340-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012340-T1
Unique NameKJC3_012340-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3272849..3274285-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012340-T1 ID=KJC3_012340-T1|Name=KJC3_012340-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1437bp|location=Sequence derived from alignment at ch8:3272849..3274285- (Aspergillus niger KJC3)
ACGAGACCGACGACTATTCCTCCCCACGCCCGTCGCCATTCTCCTCGTCT
CTTTCCCCCTCTTCCGGATTCAGTTCAACTCCCTGGGTGGGTCTAATATT
CAAAATGGCTAAGGAAAGGACCGAGAAGAAGGACAAGCGCGAGAAGAAGG
AGAAGCGCGCGGAGAAGGACGGCGTCTCCAAGACCAGCAAGAAGGAGAAG
AAGGAGAAGAAGGACAAGGTCGCCCTCGCCGACGCGGTCGAGAAGGAGCT
CACTACTAAGGTTCTCGATGGCATTGACCAGGCTGCCACTGAGGCTCCTG
TCAATGGCGCTGAGGCCGAGCACATGGACGTCGACAGCCGCCCCGTTGGC
GCCATTGTTCCTTTTGCCAGCCCTCTGGTGGAAGACAAGTCTGCCAAGAA
GGTCCTGAAGAGCGTCAAGAAGGGTAAGAAACTTCCTTTTGTATTTTCCA
TATGTTTGTTAAGAGCGCTCGGTCTGGGTCCTAAGGAGATGGAGTGTGGA
TTCGATCCGGTCTCAGCTTCTGGCCCTGAGAGATTACGATTGCCCCGTTT
GGCATTGACTGCGCATCTATCTATCATCGAATGAATATGTGCTAATGTAT
TGACTTCTAATAGCTGCCGTCAACAAGTGCCTGAAGCGCGGTGTCAAGGA
GGTTGTCAAGGCTCTCCGCAAGTCGCCCATCCCCGCTGCCAATGCCAGCA
TCGGTGTTCCCAACGGTGTCGTCATTCTCGCCGCCGATATCTCGCCGATG
GACGTTATCTCGCACATCCCTGTCCTGTGCGAGGACCACGGTATCCCCTA
CGTCTTCGTCACATCCCGAGCTGAGCTCGGCAACTCCGCCGCCACGAAAC
GCCCCACCAGTGTTGTGATGGTCGTGCCCAAGTCGGCTTCCAAGGGCAAG
AAGAAGGACGGTGAGGATGATGGAGAGGACTTCACCGAGGTGTTTGAGGA
ATTGGCCAAGCTCGCCCAGAAGGAGGCCAAGAAGGTGAACCTGTGAAGTT
TTCAGCTGGACTTCTGAATCCACCTTTCCTTTGCTCTGTTGTTTTCCTTT
TTAATTTATACGGCTTCTTTATATGTCTTGTCACTTTGCTGCTATGGCTG
TACAGTTCCACTTTGTTGTCTGACAAGGCAGTGCATGTCTTCGGGGTCTG
GCCTTTGGGACGTGTTCATTGGGTTGATCTTTTATGATGTGTCCGTTGCA
AATCCGGCGTTTTCACATGGTGTATGAAAAAAGGCAGGAAGTATCCAATA
AAAAATCCCAATCTTGACCAGAGCCTTCGTAAGCTATTTTAAGTGTACAG
AGCGTTTCGTTAAGGCGACCATTCTTGCCTCTTCCATTGCGGTGGATACG
GAAAGGTAAAGAACGAAACGAGGTGTAAGCGAGAGAGCCGGAATTATAAT
ATCAACAGGATTCGAGGCTGTCAATGCTGAGTGAAAG
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Coding sequence (CDS) from alignment at ch8:3272849..3274285-

>KJC3_012340-T1 ID=KJC3_012340-T1|Name=KJC3_012340-T1|organism=Aspergillus niger KJC3|type=CDS|length=1404bp|location=Sequence derived from alignment at ch8:3272849..3274285- (Aspergillus niger KJC3)
CTGCCGTCAACAAGTGCCTGAAGCGCGGTGTCAAGGAGGTTGTCAAGGCT
CTCCGCAAGTCGCCCATCCCCGCTGCCAATGCCAGCATCGGTGTTCCCAA
CGGTGTCGTCATTCTCGCCGCCGATATCTCGCCGATGGACGTTATCTCGC
ACATCCCTGTCCTGTGCGAGGACCACGGTATCCCCTACGTCTTCGTCACA
TCCCGAGCTGAGCTCGGCAACTCCGCCGCCACGAAACGCCCCACCAGTGT
TGTGATGGTCGTGCCCAAGTCGGCTTCCAAGGGCAAGAAGAAGGACGGTG
AGGATGATGGAGAGGACTTCACCGAGGTGTTTGAGGAATTGGCCAAGCTC
GCCCAGAAGGAGGCCAAGAAGGTGAACCTGTGAATGGCTAAGGAAAGGAC
CGAGAAGAAGGACAAGCGCGAGAAGAAGGAGAAGCGCGCGGAGAAGGACG
GCGTCTCCAAGACCAGCAAGAAGGAGAAGAAGGAGAAGAAGGACAAGGTC
GCCCTCGCCGACGCGGTCGAGAAGGAGCTCACTACTAAGGTTCTCGATGG
CATTGACCAGGCTGCCACTGAGGCTCCTGTCAATGGCGCTGAGGCCGAGC
ACATGGACGTCGACAGCCGCCCCGTTGGCGCCATTGTTCCTTTTGCCAGC
CCTCTGGTGGAAGACAAGTCTGCCAAGAAGGTCCTGAAGAGCGTCAAGAA
GGCTGCCGTCAACAAGTGCCTGAAGCGCGGTGTCAAGGAGGTTGTCAAGG
CTCTCCGCAAGTCGCCCATCCCCGCTGCCAATGCCAGCATCGGTGTTCCC
AACGGTGTCGTCATTCTCGCCGCCGATATCTCGCCGATGGACGTTATCTC
GCACATCCCTGTCCTGTGCGAGGACCACGGTATCCCCTACGTCTTCGTCA
CATCCCGAGCTGAGCTCGGCAACTCCGCCGCCACGAAACGCCCCACCAGT
GTTGTGATGGTCGTGCCCAAGTCGGCTTCCAAGGGCAAGAAGAAGGACGG
TGAGGATGATGGAGAGGACTTCACCGAGGTGTTTGAGGAATTGGCCAAGC
TCGCCCAGAAGGAGGCCAAGAAGGTGAACCTGTGAATGGCTAAGGAAAGG
ACCGAGAAGAAGGACAAGCGCGAGAAGAAGGAGAAGCGCGCGGAGAAGGA
CGGCGTCTCCAAGACCAGCAAGAAGGAGAAGAAGGAGAAGAAGGACAAGG
TCGCCCTCGCCGACGCGGTCGAGAAGGAGCTCACTACTAAGGTTCTCGAT
GGCATTGACCAGGCTGCCACTGAGGCTCCTGTCAATGGCGCTGAGGCCGA
GCACATGGACGTCGACAGCCGCCCCGTTGGCGCCATTGTTCCTTTTGCCA
GCCCTCTGGTGGAAGACAAGTCTGCCAAGAAGGTCCTGAAGAGCGTCAAG
AAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:1990904ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012340KJC3_012340Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012340-T1KJC3_012340-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012340-T1.cdsKJC3_012340-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012340-T1.utr3p1KJC3_012340-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012340-T1.exon2KJC3_012340-T1.exon2Aspergillus niger KJC3exon
KJC3_012340-T1.exon1KJC3_012340-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012340-T1.utr5p1KJC3_012340-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004037
DBxrefInterPro:IPR029064
DBxrefInterPro:IPR004038
DBxrefPFAM:PF01248
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3272849..3274285 -
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