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KJC3_012361-T1, KJC3_012361-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012361-T1
Unique NameKJC3_012361-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3349425..3349898-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012361-T1 ID=KJC3_012361-T1|Name=KJC3_012361-T1|organism=Aspergillus niger KJC3|type=mRNA|length=474bp|location=Sequence derived from alignment at ch8:3349425..3349898- (Aspergillus niger KJC3)
ATGACTGGCCGTAAGTTCATCACTTCCCATCATGGGCTATCTATCATCTC
GATAGATTGTCCACTGCCGTCTACTCCATGATCAACAGTGACTGACTTGA
CGCGTCTCAACAGGTGGAAAGGGTGGAAAGGGTCTCGGCAAGGGTGGCGC
CAAGCGTCACCGCAAGATCTTGCGTGACAACATCCAGGGTATCACTAAGC
CCGCTATCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCC
ATGATCTACGAGGAGACCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGT
CATCCGTGACGCTGTCACCTACACTGAGCACGCCAAGCGCAAGACCGTCA
CCTCCCTCGACGTCGTCTATGCTCTTAAGAGACAGGGCCGTAAGTACCAC
ACGTTTTGGCTTTTGTGTGTCCAACGCGTCTAACATGGAATTCCTCAGGT
ACCCTCTACGGTTTCGGTGGTTAA
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Coding sequence (CDS) from alignment at ch8:3349425..3349898-

>KJC3_012361-T1 ID=KJC3_012361-T1|Name=KJC3_012361-T1|organism=Aspergillus niger KJC3|type=CDS|length=936bp|location=Sequence derived from alignment at ch8:3349425..3349898- (Aspergillus niger KJC3)
GTACCCTCTACGGTTTCGGTGGTTAAGTGGAAAGGGTGGAAAGGGTCTCG
GCAAGGGTGGCGCCAAGCGTCACCGCAAGATCTTGCGTGACAACATCCAG
GGTATCACTAAGCCCGCTATCCGTCGTCTCGCTCGTCGTGGTGGTGTCAA
GCGTATCTCTGCCATGATCTACGAGGAGACCCGTGGTGTCCTCAAGACCT
TCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACTGAGCACGCCAAG
CGCAAGACCGTCACCTCCCTCGACGTCGTCTATGCTCTTAAGAGACAGGG
CCATGACTGGCCGTACCCTCTACGGTTTCGGTGGTTAAGTGGAAAGGGTG
GAAAGGGTCTCGGCAAGGGTGGCGCCAAGCGTCACCGCAAGATCTTGCGT
GACAACATCCAGGGTATCACTAAGCCCGCTATCCGTCGTCTCGCTCGTCG
TGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGACCCGTGGTG
TCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACT
GAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTATGCTCT
TAAGAGACAGGGCCATGACTGGCCGTACCCTCTACGGTTTCGGTGGTTAA
GTGGAAAGGGTGGAAAGGGTCTCGGCAAGGGTGGCGCCAAGCGTCACCGC
AAGATCTTGCGTGACAACATCCAGGGTATCACTAAGCCCGCTATCCGTCG
TCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGG
AGACCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCT
GTCACCTACACTGAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGT
CGTCTATGCTCTTAAGAGACAGGGCCATGACTGGCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012361KJC3_012361Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012361-T1KJC3_012361-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012361-T1.cdsKJC3_012361-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012361-T1.exon3KJC3_012361-T1.exon3Aspergillus niger KJC3exon
KJC3_012361-T1.exon2KJC3_012361-T1.exon2Aspergillus niger KJC3exon
KJC3_012361-T1.exon1KJC3_012361-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR019809
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR035425
DBxrefInterPro:IPR004823
DBxrefInterPro:IPR001951
DBxrefPFAM:PF02969
DBxrefPFAM:PF15511
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3349425..3349898 -
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