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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3360892..3362917+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012365-T1 ID=KJC3_012365-T1|Name=KJC3_012365-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2026bp|location=Sequence derived from alignment at ch8:3360892..3362917+ (Aspergillus niger KJC3)
ATGTCCTGCCCTCCACCAGCATCTCCTATAATCCCCGGCGCCTTCGATGA
CAGCGACGACAGCAGCAGCACCACAGACTACGGCTCCGACTTCTCCCCGG
AAGAAGACGCGCTGCTGACCGACCTGCTCGCCAAGATCGCCCCGGATCGC
CACGCGATTACCACCACTGCCCCAGCAGAAGCAGCAGCGCATCCACCTCC
ATCTCAGGTCGCACCCGTCATTCGAGACATCGAAGACCAGTATGCGGATC
CCTCGAATAGCTGGGTACCTAGGGTCCTGGGGCGCGAGAAGCCTACATGG
CCGCAGCGGAATTGGGCGAATCGGCCGGGTGGCGGCGGCGCAAGAGCAGC
GGCGATTCCAGGCTACGGTCGTGCCGCGTCTGGTAGTTTCCCCTTCCCTA
TGGCTATAGTTGTTTGTGGACTGATTGGACAGTTGGGCTGACGTTGGAAC
TCCCTCGAAGCGTTTAGTTGAGCATCCGAATTCGACAGAAGGGCGCGAGA
GAGATCGCGAACGCGAGGCAGCTCGTCATCAGGAACGGATAGAGAGGGAG
AATAATGATATTAACAACAGCAATAATAATGATAATATTGAGGTGGACAC
AAGGTCACCTGTGGAACGATTTCGACGGCCTCCGAATAAAGCCTTCTCAG
TCACGGATCTGATCTCGCCGGCGTGGTGTGAGCTACAGTATTGGTATACG
CTGACCAAGTTTGGGCGCAAGCGGAGGACACCGGCGATGAAGTTGGGAAG
TAATATCCACAAGACTCTTGAGGATGAGATCTACACGACCGTTCCGGTGG
ATATCACTACAAAAGAGGATGCGCTTGCCTTGCGGATTTGGAATATCATC
CAGGGTCTGCGCATGCTGCGGGAGTTTGGGATTACTCGGGAATTGGAGGT
CTGGGGCTTGGTGGACGGAGAGCTCGTTACGGGCGTGATTGATCAGCTTT
CTTATGACTGTCCTGACCCGGAGCTGGAGGCAACCGCTGCGACGTATTAT
GCTGATATTGAGGCGTCGAGGGCTATTTTGCCCGAGTATCAGATGTCGTT
GTCAGATTACCTGCTCTCCCCGACGGGGGGCGGGAGGCTTTTGTCGGAGG
TGTATGGGCAGGATGATACGCCTCCCAAGGCAGATCCTTTGGATGTGGAC
ATGGCCAACAGCAGTCAAGAGTCCGATAATCTTCCTCATCTGCCCCGGAT
CTATCTCACCGACGTCAAGACACGCGGCAGCGGCTCCGTCCCAACCGTCA
AGAGCTCCTCATTCCGACCTACTCTCCTCCAACTCCAACTCTACTACCAC
ATGCTCAACCGCCTCGTCCTCAGCGACGACGTAACCATCGACCTCCTCGC
CTCGCGGTACAACCTCGACCCCAACCGCCCTTTCACCGACGCCTTCATCA
ACGAAGTCGGCGGCCTGAACGAACAATTCTTCGACGCTATGTCCTCGCAA
GAATTCGACCCAGACTATATCCCCACCCCCCAAGACGCCATCGAGCATCC
CCAGCGTCACCATTCCTCCCAATCTCAACCTGATCCCCTCCCATCAAGCC
AAGACTCCGCCACCATCCTCTCCACCCACAACACCCTCACCACCCTCTGG
ACCCTCATGAAATCCCACCTTCGGCTCACCTTCCTCCCCTCATCAGCAGC
AACGCACTCCTCACCTTCCATTCCCTCCGAATTCCAACCCCGCAGTCTAG
ACTCCTACCCCACCATCCTGTCTCCGCTGCTCACGGCGCGGTATCTTTCC
TCGAAGCCGAGTGCGGATCTCCAACCACCCCGGGTTTTGGGGAGTAGGTC
GTTCCTGTTCGATCCGACGTCTATGTCGTCGTATTTGACAGATCAGATGC
ATTGGTGGCGCGGGGGAAGGGATCCGCGCGGCGTGGAGGTCATGGAGGCG
TGGAAATGCCGGATTTGTGAGTTTAGGGATGAGTGTGAGTGGAGGAGGGA
GCGGGAGTGGTTGTTTGCGAATAGGAGAATGGGGAGGAAGAGTAAGGTTG
AGGGGGGAGTTGAGGTTGGTGTTTGA back to topCoding sequence (CDS) from alignment at ch8:3360892..3362917+ >KJC3_012365-T1 ID=KJC3_012365-T1|Name=KJC3_012365-T1|organism=Aspergillus niger KJC3|type=CDS|length=3882bp|location=Sequence derived from alignment at ch8:3360892..3362917+ (Aspergillus niger KJC3)
ATGTCCTGCCCTCCACCAGCATCTCCTATAATCCCCGGCGCCTTCGATGA
CAGCGACGACAGCAGCAGCACCACAGACTACGGCTCCGACTTCTCCCCGG
AAGAAGACGCGCTGCTGACCGACCTGCTCGCCAAGATCGCCCCGGATCGC
CACGCGATTACCACCACTGCCCCAGCAGAAGCAGCAGCGCATCCACCTCC
ATCTCAGGTCGCACCCGTCATTCGAGACATCGAAGACCAGTATGCGGATC
CCTCGAATAGCTGGGTACCTAGGGTCCTGGGGCGCGAGAAGCCTACATGG
CCGCAGCGGAATTGGGCGAATCGGCCGGGTGGCGGCGGCGCAAGAGCAGC
GGCGATTCCAGGCTACGGTCGTGCCGCGTCTGTTGAGCATCCGAATTCGA
CAGAAGGGCGCGAGAGAGATCGCGAACGCGAGGCAGCTCGTCATCAGGAA
CGGATAGAGAGGGAGAATAATGATATTAACAACAGCAATAATAATGATAA
TATTGAGGTGGACACAAGGTCACCTGTGGAACGATTTCGACGGCCTCCGA
ATAAAGCCTTCTCAGTCACGGATCTGATCTCGCCGGCGTGGTGTGAGCTA
CAGTATTGGTATACGCTGACCAAGTTTGGGCGCAAGCGGAGGACACCGGC
GATGAAGTTGGGAAGTAATATCCACAAGACTCTTGAGGATGAGATCTACA
CGACCGTTCCGGTGGATATCACTACAAAAGAGGATGCGCTTGCCTTGCGG
ATTTGGAATATCATCCAGGGTCTGCGCATGCTGCGGGAGTTTGGGATTAC
TCGGGAATTGGAGGTCTGGGGCTTGGTGGACGGAGAGCTCGTTACGGGCG
TGATTGATCAGCTTTCTTATGACTGTCCTGACCCGGAGCTGGAGGCAACC
GCTGCGACGTATTATGCTGATATTGAGGCGTCGAGGGCTATTTTGCCCGA
GTATCAGATGTCGTTGTCAGATTACCTGCTCTCCCCGACGGGGGGCGGGA
GGCTTTTGTCGGAGGTGTATGGGCAGGATGATACGCCTCCCAAGGCAGAT
CCTTTGGATGTGGACATGGCCAACAGCAGTCAAGAGTCCGATAATCTTCC
TCATCTGCCCCGGATCTATCTCACCGACGTCAAGACACGCGGCAGCGGCT
CCGTCCCAACCGTCAAGAGCTCCTCATTCCGACCTACTCTCCTCCAACTC
CAACTCTACTACCACATGCTCAACCGCCTCGTCCTCAGCGACGACGTAAC
CATCGACCTCCTCGCCTCGCGGTACAACCTCGACCCCAACCGCCCTTTCA
CCGACGCCTTCATCAACGAAGTCGGCGGCCTGAACGAACAATTCTTCGAC
GCTATGTCCTCGCAAGAATTCGACCCAGACTATATCCCCACCCCCCAAGA
CGCCATCGAGCATCCCCAGCGTCACCATTCCTCCCAATCTCAACCTGATC
CCCTCCCATCAAGCCAAGACTCCGCCACCATCCTCTCCACCCACAACACC
CTCACCACCCTCTGGACCCTCATGAAATCCCACCTTCGGCTCACCTTCCT
CCCCTCATCAGCAGCAACGCACTCCTCACCTTCCATTCCCTCCGAATTCC
AACCCCGCAGTCTAGACTCCTACCCCACCATCCTGTCTCCGCTGCTCACG
GCGCGGTATCTTTCCTCGAAGCCGAGTGCGGATCTCCAACCACCCCGGGT
TTTGGGGAGTAGGTCGTTCCTGTTCGATCCGACGTCTATGTCGTCGTATT
TGACAGATCAGATGCATTGGTGGCGCGGGGGAAGGGATCCGCGCGGCGTG
GAGGTCATGGAGGCGTGGAAATGCCGGATTTGTGAGTTTAGGGATGAGTG
TGAGTGGAGGAGGGAGCGGGAGTGGTTGTTTGCGAATAGGAGAATGGGGA
GGAAGAGTAAGGTTGAGGGGGGAGTTGAGGTTGGTGTTTGAATGTCCTGC
CCTCCACCAGCATCTCCTATAATCCCCGGCGCCTTCGATGACAGCGACGA
CAGCAGCAGCACCACAGACTACGGCTCCGACTTCTCCCCGGAAGAAGACG
CGCTGCTGACCGACCTGCTCGCCAAGATCGCCCCGGATCGCCACGCGATT
ACCACCACTGCCCCAGCAGAAGCAGCAGCGCATCCACCTCCATCTCAGGT
CGCACCCGTCATTCGAGACATCGAAGACCAGTATGCGGATCCCTCGAATA
GCTGGGTACCTAGGGTCCTGGGGCGCGAGAAGCCTACATGGCCGCAGCGG
AATTGGGCGAATCGGCCGGGTGGCGGCGGCGCAAGAGCAGCGGCGATTCC
AGGCTACGGTCGTGCCGCGTCTGTTGAGCATCCGAATTCGACAGAAGGGC
GCGAGAGAGATCGCGAACGCGAGGCAGCTCGTCATCAGGAACGGATAGAG
AGGGAGAATAATGATATTAACAACAGCAATAATAATGATAATATTGAGGT
GGACACAAGGTCACCTGTGGAACGATTTCGACGGCCTCCGAATAAAGCCT
TCTCAGTCACGGATCTGATCTCGCCGGCGTGGTGTGAGCTACAGTATTGG
TATACGCTGACCAAGTTTGGGCGCAAGCGGAGGACACCGGCGATGAAGTT
GGGAAGTAATATCCACAAGACTCTTGAGGATGAGATCTACACGACCGTTC
CGGTGGATATCACTACAAAAGAGGATGCGCTTGCCTTGCGGATTTGGAAT
ATCATCCAGGGTCTGCGCATGCTGCGGGAGTTTGGGATTACTCGGGAATT
GGAGGTCTGGGGCTTGGTGGACGGAGAGCTCGTTACGGGCGTGATTGATC
AGCTTTCTTATGACTGTCCTGACCCGGAGCTGGAGGCAACCGCTGCGACG
TATTATGCTGATATTGAGGCGTCGAGGGCTATTTTGCCCGAGTATCAGAT
GTCGTTGTCAGATTACCTGCTCTCCCCGACGGGGGGCGGGAGGCTTTTGT
CGGAGGTGTATGGGCAGGATGATACGCCTCCCAAGGCAGATCCTTTGGAT
GTGGACATGGCCAACAGCAGTCAAGAGTCCGATAATCTTCCTCATCTGCC
CCGGATCTATCTCACCGACGTCAAGACACGCGGCAGCGGCTCCGTCCCAA
CCGTCAAGAGCTCCTCATTCCGACCTACTCTCCTCCAACTCCAACTCTAC
TACCACATGCTCAACCGCCTCGTCCTCAGCGACGACGTAACCATCGACCT
CCTCGCCTCGCGGTACAACCTCGACCCCAACCGCCCTTTCACCGACGCCT
TCATCAACGAAGTCGGCGGCCTGAACGAACAATTCTTCGACGCTATGTCC
TCGCAAGAATTCGACCCAGACTATATCCCCACCCCCCAAGACGCCATCGA
GCATCCCCAGCGTCACCATTCCTCCCAATCTCAACCTGATCCCCTCCCAT
CAAGCCAAGACTCCGCCACCATCCTCTCCACCCACAACACCCTCACCACC
CTCTGGACCCTCATGAAATCCCACCTTCGGCTCACCTTCCTCCCCTCATC
AGCAGCAACGCACTCCTCACCTTCCATTCCCTCCGAATTCCAACCCCGCA
GTCTAGACTCCTACCCCACCATCCTGTCTCCGCTGCTCACGGCGCGGTAT
CTTTCCTCGAAGCCGAGTGCGGATCTCCAACCACCCCGGGTTTTGGGGAG
TAGGTCGTTCCTGTTCGATCCGACGTCTATGTCGTCGTATTTGACAGATC
AGATGCATTGGTGGCGCGGGGGAAGGGATCCGCGCGGCGTGGAGGTCATG
GAGGCGTGGAAATGCCGGATTTGTGAGTTTAGGGATGAGTGTGAGTGGAG
GAGGGAGCGGGAGTGGTTGTTTGCGAATAGGAGAATGGGGAGGAAGAGTA
AGGTTGAGGGGGGAGTTGAGGTTGGTGTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0045145 | single-stranded DNA 5'-3' exodeoxyribonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019190 |
| DBxref | PFAM:PF09810 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3360892..3362917 + |
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