You are here

Home

KJC3_012366-T1, KJC3_012366-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012366-T1
Unique NameKJC3_012366-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3363152..3364640-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012366-T1 ID=KJC3_012366-T1|Name=KJC3_012366-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1489bp|location=Sequence derived from alignment at ch8:3363152..3364640- (Aspergillus niger KJC3)
ATGTTTCCCAGATCGTTTCAATTTGGCCAATCTCCCATCTACGATATCGC
CCTGATCAGTGCGGTGACTAGTATCAGCGTCTGGCTCATCACCCGAGCTT
TCCACTGGTGGACAGCAACATCCAAGCCAGGTGTTTCGCGATCAACCACC
CCAGATCTCGAGAAGAAATCGGTCGCATTTACCAGGAAACCGGGAGGTGA
GCCATCTCCAACAACTTCATAGGCAAGCTCAGGTAACTGATGCGAGTAAT
GTAGAATGGATCCCATCGGACTTCAAACGGCCTCCAGCATCCCCGTATCC
CGACTGGGATGTGCACACGACCAAGCCCATTCCCTATCGACCATTTCGAT
ATGGACCGTAAGTGATTCACCAAGTGCACATCTACAACCAGTCAGTGACC
TGACCATCCACAGCAAGTACTTCGTCACGATGGGCCTTCGCAGCCTGAAA
TGGGACGAATGGATTGGTGAGACCCTGTCCCTATCCCACCACTTCACCTT
CGCAGACTAACGATACGCCATCTACTAGAACTCGACAACCACTACCTCAA
ATACCACGCCGACAAGGCCCGTCGCATCGCAGAACGCGGCGACAAATGCT
GCAAAACAGCCCCCGAAGCATGGGACGCAGCTATCGAGCTCCTCGAAGAG
CTGTAAGCAAACCTCTTATCCCTCCTTCACCCTTCATACACACACCTACT
AACCATCCTCCCCCCCAAAAAAGAACCTCCTACCTCCCCGAACGCTACCC
AACCATGTTCCAGAAGACCCCCACAGGCCTAACCAACCTCATCACGCACG
AAACCTTCGACATAACCCAACGTCCCCTCCCCGAAGACCCTATGACCATC
GCCGCCCGCCTCATCCAAGACGACCTCGCCATCATGATCGAACGACCCGA
CGGCGAATACTACCTCCTAGCAGGCGCCGTCCTCCTCGCCGGTTTCTGGC
GCCTGTCCGACAAATACGGCATGCGACTCTCGGAGATCCACACCTCCGGC
TCGGTGCCCCAATACACTGAGAAACTCGAAAAGGGAATGATGAATTTCTT
CCGTCGGCTGAAACCCGAAGACCCTGTTGTCCGGAACAACTACTTCATTC
AAGTCGATGACAGCTTGCCCTGGTCACATAGTATCGGCTCCGAAGACTCA
GAGGCCGTATCGTGGAGCACGGCGCAGAAGAACAAGGCGATTGAGAATCA
CTGGTTCCGGTCTGAGAGGCAGAGTCTACGACGCTTGCCGAAGACGGGAG
GCGTGGTGTTTACGATTCGGACGTACTTTGAGCCGATTACGGGGATTGTC
GAGGAGGAGTACGTGCCTGGAAGGTTGGCTTCGGCGGTGAGGAGTTGGGG
GAATGATGTGGCTGTTTATAAGGGACGGGAGAGGTATGGGGATGTGTTGT
TGGAGTTTTTGGATAGGAAGCATCAGGAACAGGTTGATAGGGGGTTGAGG
GTGGAGTTGGAGGATGAGGTGAGAAAGTATCCTTTTTAA
back to top

Coding sequence (CDS) from alignment at ch8:3363152..3364640-

>KJC3_012366-T1 ID=KJC3_012366-T1|Name=KJC3_012366-T1|organism=Aspergillus niger KJC3|type=CDS|length=6210bp|location=Sequence derived from alignment at ch8:3363152..3364640- (Aspergillus niger KJC3)
AACCTCCTACCTCCCCGAACGCTACCCAACCATGTTCCAGAAGACCCCCA
CAGGCCTAACCAACCTCATCACGCACGAAACCTTCGACATAACCCAACGT
CCCCTCCCCGAAGACCCTATGACCATCGCCGCCCGCCTCATCCAAGACGA
CCTCGCCATCATGATCGAACGACCCGACGGCGAATACTACCTCCTAGCAG
GCGCCGTCCTCCTCGCCGGTTTCTGGCGCCTGTCCGACAAATACGGCATG
CGACTCTCGGAGATCCACACCTCCGGCTCGGTGCCCCAATACACTGAGAA
ACTCGAAAAGGGAATGATGAATTTCTTCCGTCGGCTGAAACCCGAAGACC
CTGTTGTCCGGAACAACTACTTCATTCAAGTCGATGACAGCTTGCCCTGG
TCACATAGTATCGGCTCCGAAGACTCAGAGGCCGTATCGTGGAGCACGGC
GCAGAAGAACAAGGCGATTGAGAATCACTGGTTCCGGTCTGAGAGGCAGA
GTCTACGACGCTTGCCGAAGACGGGAGGCGTGGTGTTTACGATTCGGACG
TACTTTGAGCCGATTACGGGGATTGTCGAGGAGGAGTACGTGCCTGGAAG
GTTGGCTTCGGCGGTGAGGAGTTGGGGGAATGATGTGGCTGTTTATAAGG
GACGGGAGAGGTATGGGGATGTGTTGTTGGAGTTTTTGGATAGGAAGCAT
CAGGAACAGGTTGATAGGGGGTTGAGGGTGGAGTTGGAGGATGAGGTGAG
AAAGTATCCTTTTTAAAACTCGACAACCACTACCTCAAATACCACGCCGA
CAAGGCCCGTCGCATCGCAGAACGCGGCGACAAATGCTGCAAAACAGCCC
CCGAAGCATGGGACGCAGCTATCGAGCTCCTCGAAGAGCTCAAGTACTTC
GTCACGATGGGCCTTCGCAGCCTGAAATGGGACGAATGGATTGAATGGAT
CCCATCGGACTTCAAACGGCCTCCAGCATCCCCGTATCCCGACTGGGATG
TGCACACGACCAAGCCCATTCCCTATCGACCATTTCGATATGGACCATGT
TTCCCAGATCGTTTCAATTTGGCCAATCTCCCATCTACGATATCGCCCTG
ATCAGTGCGGTGACTAGTATCAGCGTCTGGCTCATCACCCGAGCTTTCCA
CTGGTGGACAGCAACATCCAAGCCAGGTGTTTCGCGATCAACCACCCCAG
ATCTCGAGAAGAAATCGGTCGCATTTACCAGGAAACCGGGAGAACCTCCT
ACCTCCCCGAACGCTACCCAACCATGTTCCAGAAGACCCCCACAGGCCTA
ACCAACCTCATCACGCACGAAACCTTCGACATAACCCAACGTCCCCTCCC
CGAAGACCCTATGACCATCGCCGCCCGCCTCATCCAAGACGACCTCGCCA
TCATGATCGAACGACCCGACGGCGAATACTACCTCCTAGCAGGCGCCGTC
CTCCTCGCCGGTTTCTGGCGCCTGTCCGACAAATACGGCATGCGACTCTC
GGAGATCCACACCTCCGGCTCGGTGCCCCAATACACTGAGAAACTCGAAA
AGGGAATGATGAATTTCTTCCGTCGGCTGAAACCCGAAGACCCTGTTGTC
CGGAACAACTACTTCATTCAAGTCGATGACAGCTTGCCCTGGTCACATAG
TATCGGCTCCGAAGACTCAGAGGCCGTATCGTGGAGCACGGCGCAGAAGA
ACAAGGCGATTGAGAATCACTGGTTCCGGTCTGAGAGGCAGAGTCTACGA
CGCTTGCCGAAGACGGGAGGCGTGGTGTTTACGATTCGGACGTACTTTGA
GCCGATTACGGGGATTGTCGAGGAGGAGTACGTGCCTGGAAGGTTGGCTT
CGGCGGTGAGGAGTTGGGGGAATGATGTGGCTGTTTATAAGGGACGGGAG
AGGTATGGGGATGTGTTGTTGGAGTTTTTGGATAGGAAGCATCAGGAACA
GGTTGATAGGGGGTTGAGGGTGGAGTTGGAGGATGAGGTGAGAAAGTATC
CTTTTTAAAACTCGACAACCACTACCTCAAATACCACGCCGACAAGGCCC
GTCGCATCGCAGAACGCGGCGACAAATGCTGCAAAACAGCCCCCGAAGCA
TGGGACGCAGCTATCGAGCTCCTCGAAGAGCTCAAGTACTTCGTCACGAT
GGGCCTTCGCAGCCTGAAATGGGACGAATGGATTGAATGGATCCCATCGG
ACTTCAAACGGCCTCCAGCATCCCCGTATCCCGACTGGGATGTGCACACG
ACCAAGCCCATTCCCTATCGACCATTTCGATATGGACCATGTTTCCCAGA
TCGTTTCAATTTGGCCAATCTCCCATCTACGATATCGCCCTGATCAGTGC
GGTGACTAGTATCAGCGTCTGGCTCATCACCCGAGCTTTCCACTGGTGGA
CAGCAACATCCAAGCCAGGTGTTTCGCGATCAACCACCCCAGATCTCGAG
AAGAAATCGGTCGCATTTACCAGGAAACCGGGAGAACCTCCTACCTCCCC
GAACGCTACCCAACCATGTTCCAGAAGACCCCCACAGGCCTAACCAACCT
CATCACGCACGAAACCTTCGACATAACCCAACGTCCCCTCCCCGAAGACC
CTATGACCATCGCCGCCCGCCTCATCCAAGACGACCTCGCCATCATGATC
GAACGACCCGACGGCGAATACTACCTCCTAGCAGGCGCCGTCCTCCTCGC
CGGTTTCTGGCGCCTGTCCGACAAATACGGCATGCGACTCTCGGAGATCC
ACACCTCCGGCTCGGTGCCCCAATACACTGAGAAACTCGAAAAGGGAATG
ATGAATTTCTTCCGTCGGCTGAAACCCGAAGACCCTGTTGTCCGGAACAA
CTACTTCATTCAAGTCGATGACAGCTTGCCCTGGTCACATAGTATCGGCT
CCGAAGACTCAGAGGCCGTATCGTGGAGCACGGCGCAGAAGAACAAGGCG
ATTGAGAATCACTGGTTCCGGTCTGAGAGGCAGAGTCTACGACGCTTGCC
GAAGACGGGAGGCGTGGTGTTTACGATTCGGACGTACTTTGAGCCGATTA
CGGGGATTGTCGAGGAGGAGTACGTGCCTGGAAGGTTGGCTTCGGCGGTG
AGGAGTTGGGGGAATGATGTGGCTGTTTATAAGGGACGGGAGAGGTATGG
GGATGTGTTGTTGGAGTTTTTGGATAGGAAGCATCAGGAACAGGTTGATA
GGGGGTTGAGGGTGGAGTTGGAGGATGAGGTGAGAAAGTATCCTTTTTAA
AACTCGACAACCACTACCTCAAATACCACGCCGACAAGGCCCGTCGCATC
GCAGAACGCGGCGACAAATGCTGCAAAACAGCCCCCGAAGCATGGGACGC
AGCTATCGAGCTCCTCGAAGAGCTCAAGTACTTCGTCACGATGGGCCTTC
GCAGCCTGAAATGGGACGAATGGATTGAATGGATCCCATCGGACTTCAAA
CGGCCTCCAGCATCCCCGTATCCCGACTGGGATGTGCACACGACCAAGCC
CATTCCCTATCGACCATTTCGATATGGACCATGTTTCCCAGATCGTTTCA
ATTTGGCCAATCTCCCATCTACGATATCGCCCTGATCAGTGCGGTGACTA
GTATCAGCGTCTGGCTCATCACCCGAGCTTTCCACTGGTGGACAGCAACA
TCCAAGCCAGGTGTTTCGCGATCAACCACCCCAGATCTCGAGAAGAAATC
GGTCGCATTTACCAGGAAACCGGGAGAACCTCCTACCTCCCCGAACGCTA
CCCAACCATGTTCCAGAAGACCCCCACAGGCCTAACCAACCTCATCACGC
ACGAAACCTTCGACATAACCCAACGTCCCCTCCCCGAAGACCCTATGACC
ATCGCCGCCCGCCTCATCCAAGACGACCTCGCCATCATGATCGAACGACC
CGACGGCGAATACTACCTCCTAGCAGGCGCCGTCCTCCTCGCCGGTTTCT
GGCGCCTGTCCGACAAATACGGCATGCGACTCTCGGAGATCCACACCTCC
GGCTCGGTGCCCCAATACACTGAGAAACTCGAAAAGGGAATGATGAATTT
CTTCCGTCGGCTGAAACCCGAAGACCCTGTTGTCCGGAACAACTACTTCA
TTCAAGTCGATGACAGCTTGCCCTGGTCACATAGTATCGGCTCCGAAGAC
TCAGAGGCCGTATCGTGGAGCACGGCGCAGAAGAACAAGGCGATTGAGAA
TCACTGGTTCCGGTCTGAGAGGCAGAGTCTACGACGCTTGCCGAAGACGG
GAGGCGTGGTGTTTACGATTCGGACGTACTTTGAGCCGATTACGGGGATT
GTCGAGGAGGAGTACGTGCCTGGAAGGTTGGCTTCGGCGGTGAGGAGTTG
GGGGAATGATGTGGCTGTTTATAAGGGACGGGAGAGGTATGGGGATGTGT
TGTTGGAGTTTTTGGATAGGAAGCATCAGGAACAGGTTGATAGGGGGTTG
AGGGTGGAGTTGGAGGATGAGGTGAGAAAGTATCCTTTTTAAAACTCGAC
AACCACTACCTCAAATACCACGCCGACAAGGCCCGTCGCATCGCAGAACG
CGGCGACAAATGCTGCAAAACAGCCCCCGAAGCATGGGACGCAGCTATCG
AGCTCCTCGAAGAGCTCAAGTACTTCGTCACGATGGGCCTTCGCAGCCTG
AAATGGGACGAATGGATTGAATGGATCCCATCGGACTTCAAACGGCCTCC
AGCATCCCCGTATCCCGACTGGGATGTGCACACGACCAAGCCCATTCCCT
ATCGACCATTTCGATATGGACCATGTTTCCCAGATCGTTTCAATTTGGCC
AATCTCCCATCTACGATATCGCCCTGATCAGTGCGGTGACTAGTATCAGC
GTCTGGCTCATCACCCGAGCTTTCCACTGGTGGACAGCAACATCCAAGCC
AGGTGTTTCGCGATCAACCACCCCAGATCTCGAGAAGAAATCGGTCGCAT
TTACCAGGAAACCGGGAGAACCTCCTACCTCCCCGAACGCTACCCAACCA
TGTTCCAGAAGACCCCCACAGGCCTAACCAACCTCATCACGCACGAAACC
TTCGACATAACCCAACGTCCCCTCCCCGAAGACCCTATGACCATCGCCGC
CCGCCTCATCCAAGACGACCTCGCCATCATGATCGAACGACCCGACGGCG
AATACTACCTCCTAGCAGGCGCCGTCCTCCTCGCCGGTTTCTGGCGCCTG
TCCGACAAATACGGCATGCGACTCTCGGAGATCCACACCTCCGGCTCGGT
GCCCCAATACACTGAGAAACTCGAAAAGGGAATGATGAATTTCTTCCGTC
GGCTGAAACCCGAAGACCCTGTTGTCCGGAACAACTACTTCATTCAAGTC
GATGACAGCTTGCCCTGGTCACATAGTATCGGCTCCGAAGACTCAGAGGC
CGTATCGTGGAGCACGGCGCAGAAGAACAAGGCGATTGAGAATCACTGGT
TCCGGTCTGAGAGGCAGAGTCTACGACGCTTGCCGAAGACGGGAGGCGTG
GTGTTTACGATTCGGACGTACTTTGAGCCGATTACGGGGATTGTCGAGGA
GGAGTACGTGCCTGGAAGGTTGGCTTCGGCGGTGAGGAGTTGGGGGAATG
ATGTGGCTGTTTATAAGGGACGGGAGAGGTATGGGGATGTGTTGTTGGAG
TTTTTGGATAGGAAGCATCAGGAACAGGTTGATAGGGGGTTGAGGGTGGA
GTTGGAGGATGAGGTGAGAAAGTATCCTTTTTAAAACTCGACAACCACTA
CCTCAAATACCACGCCGACAAGGCCCGTCGCATCGCAGAACGCGGCGACA
AATGCTGCAAAACAGCCCCCGAAGCATGGGACGCAGCTATCGAGCTCCTC
GAAGAGCTCAAGTACTTCGTCACGATGGGCCTTCGCAGCCTGAAATGGGA
CGAATGGATTGAATGGATCCCATCGGACTTCAAACGGCCTCCAGCATCCC
CGTATCCCGACTGGGATGTGCACACGACCAAGCCCATTCCCTATCGACCA
TTTCGATATGGACCATGTTTCCCAGATCGTTTCAATTTGGCCAATCTCCC
ATCTACGATATCGCCCTGATCAGTGCGGTGACTAGTATCAGCGTCTGGCT
CATCACCCGAGCTTTCCACTGGTGGACAGCAACATCCAAGCCAGGTGTTT
CGCGATCAACCACCCCAGATCTCGAGAAGAAATCGGTCGCATTTACCAGG
AAACCGGGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012366KJC3_012366Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012366-T1KJC3_012366-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012366-T1.cdsKJC3_012366-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012366-T1.exon5KJC3_012366-T1.exon5Aspergillus niger KJC3exon
KJC3_012366-T1.exon4KJC3_012366-T1.exon4Aspergillus niger KJC3exon
KJC3_012366-T1.exon3KJC3_012366-T1.exon3Aspergillus niger KJC3exon
KJC3_012366-T1.exon2KJC3_012366-T1.exon2Aspergillus niger KJC3exon
KJC3_012366-T1.exon1KJC3_012366-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR021848
DBxrefPFAM:PF11927
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3363152..3364640 -
Powered by Drupal