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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3386182..3387582+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012373-T1 ID=KJC3_012373-T1|Name=KJC3_012373-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1401bp|location=Sequence derived from alignment at ch8:3386182..3387582+ (Aspergillus niger KJC3)
GGCACAACCAACTTTCCGCCGCGGAGCTCCAACTTGAGCTTCTCCATCTC
CTCGTCGCCAATGTCCGCCTCGCACATCCCCAACCTGAACACCCTGCGTC
GCGGCGGTGGTCGCGGCCGATTTCGAAGTCGCGGAGGTGGCCAGACTGGT
GATGCAGGCCACGGGTCTCATGGCGCCAAAGACCGCGTGGTGCAGGGCAC
CGACAATGACGCCAGCGTCTCCCGCCTCAGCGCCGTGAATCTGGGATATC
TCGATGATGTCTACGCTCCTGCATTGACGCCTCCGGGCATGGAAACCCGA
CGACTTCCCATCATCAACAGAGGTACTTTACCTTTAAACAGATACCATTA
TTTTGTTTTCCCAACAGTACTTATCGTTTAACCATCATAGGTACCTACGT
CCGCACCACTGCCATCGACCGCCTCGTCACCCGCTTTCTGAACGCCCATC
CTTCTCACCCCAAGAAACAAATCATCTCCCTGGGCGCCGGCACCGACACG
CGCATCTTCCGTCTTCTTTCCTCCCCTACCTACGATGCATCGGATCTCGT
TTACCACGAGATCGACTTCCCCGTCAACACTTCCGCTAAGATCAAACTCA
TCCGCGCCGCCCCTCTCCTCCAACGCGTCCTCAGCAGCAGCAGCAGTGAC
ACGGTTGAAATCTCTCCAACCAACGACGCACTCCACTCGCCCTCCTACCA
CCTCCACCCCCTCGATCTCCGCAATCTACCCACCTCCCCTGCCCTCCCAG
GCCTCGATCCCACTCTCCCCACCCTCCTCCTGTCTGAGTGTTGTCTCATA
TACCTCACCCCCAGCGAAGCCAGCTTGGTAGTCCGCCACTTCACAGAAAC
CATCTTTCCGGCGACCACGCCGGTAGGGTTGGTTCTGTATGAGCCCATCC
GGCCAGACGATGCGTTCGGGCGCACGATGGTGGCGAATCTAGCCACGAGG
GGGATTCAGTTGCAGACATTGCAGGAGTATGCGTCGCTGGGGGCGCAGCG
ACGGAGGTTACGGGAGATGGGATTGGACGGGGGGCAGGCGGCAGCAGATG
TAGATTTCATCTGGGAAAGGTGGGTGAGTGAGCGGGAGAAGGAACGGGTG
GCAGGGTTGGAGATGTTGGATGAGATGGAGGAGTGGCAGTTATTGGCAAG
ACATTATTGTGTTGCATGGGGGTGGAGGGATGTTCCTGGTGGAGTGTTTG
AGGGATGGAGGGAGATGGAAGGGCAGGAGGAGTAAGAGTATAGTAAGTAT
AGTAGTAGTGTGCGTCATACGTGATGGCTAGCTAGCTAGTTAGTTTGTTG
TACCTAAGTAGTTCCCTAGACTATCATATAATTATTATATATGAATGAAA
ATCCACGTTGAACGCTTCGGAGCGCACAGGCCAAGGGGCGAGAAAGAGGA
G back to topCoding sequence (CDS) from alignment at ch8:3386182..3387582+ >KJC3_012373-T1 ID=KJC3_012373-T1|Name=KJC3_012373-T1|organism=Aspergillus niger KJC3|type=CDS|length=2214bp|location=Sequence derived from alignment at ch8:3386182..3387582+ (Aspergillus niger KJC3)
ATGTCCGCCTCGCACATCCCCAACCTGAACACCCTGCGTCGCGGCGGTGG
TCGCGGCCGATTTCGAAGTCGCGGAGGTGGCCAGACTGGTGATGCAGGCC
ACGGGTCTCATGGCGCCAAAGACCGCGTGGTGCAGGGCACCGACAATGAC
GCCAGCGTCTCCCGCCTCAGCGCCGTGAATCTGGGATATCTCGATGATGT
CTACGCTCCTGCATTGACGCCTCCGGGCATGGAAACCCGACGACTTCCCA
TCATCAACAGAGGTACCTACGTCCGCACCACTGCCATCGACCGCCTCGTC
ACCCGCTTTCTGAACGCCCATCCTTCTCACCCCAAGAAACAAATCATCTC
CCTGGGCGCCGGCACCGACACGCGCATCTTCCGTCTTCTTTCCTCCCCTA
CCTACGATGCATCGGATCTCGTTTACCACGAGATCGACTTCCCCGTCAAC
ACTTCCGCTAAGATCAAACTCATCCGCGCCGCCCCTCTCCTCCAACGCGT
CCTCAGCAGCAGCAGCAGTGACACGGTTGAAATCTCTCCAACCAACGACG
CACTCCACTCGCCCTCCTACCACCTCCACCCCCTCGATCTCCGCAATCTA
CCCACCTCCCCTGCCCTCCCAGGCCTCGATCCCACTCTCCCCACCCTCCT
CCTGTCTGAGTGTTGTCTCATATACCTCACCCCCAGCGAAGCCAGCTTGG
TAGTCCGCCACTTCACAGAAACCATCTTTCCGGCGACCACGCCGGTAGGG
TTGGTTCTGTATGAGCCCATCCGGCCAGACGATGCGTTCGGGCGCACGAT
GGTGGCGAATCTAGCCACGAGGGGGATTCAGTTGCAGACATTGCAGGAGT
ATGCGTCGCTGGGGGCGCAGCGACGGAGGTTACGGGAGATGGGATTGGAC
GGGGGGCAGGCGGCAGCAGATGTAGATTTCATCTGGGAAAGGTGGGTGAG
TGAGCGGGAGAAGGAACGGGTGGCAGGGTTGGAGATGTTGGATGAGATGG
AGGAGTGGCAGTTATTGGCAAGACATTATTGTGTTGCATGGGGGTGGAGG
GATGTTCCTGGTGGAGTGTTTGAGGGATGGAGGGAGATGGAAGGGCAGGA
GGAGTAAATGTCCGCCTCGCACATCCCCAACCTGAACACCCTGCGTCGCG
GCGGTGGTCGCGGCCGATTTCGAAGTCGCGGAGGTGGCCAGACTGGTGAT
GCAGGCCACGGGTCTCATGGCGCCAAAGACCGCGTGGTGCAGGGCACCGA
CAATGACGCCAGCGTCTCCCGCCTCAGCGCCGTGAATCTGGGATATCTCG
ATGATGTCTACGCTCCTGCATTGACGCCTCCGGGCATGGAAACCCGACGA
CTTCCCATCATCAACAGAGGTACCTACGTCCGCACCACTGCCATCGACCG
CCTCGTCACCCGCTTTCTGAACGCCCATCCTTCTCACCCCAAGAAACAAA
TCATCTCCCTGGGCGCCGGCACCGACACGCGCATCTTCCGTCTTCTTTCC
TCCCCTACCTACGATGCATCGGATCTCGTTTACCACGAGATCGACTTCCC
CGTCAACACTTCCGCTAAGATCAAACTCATCCGCGCCGCCCCTCTCCTCC
AACGCGTCCTCAGCAGCAGCAGCAGTGACACGGTTGAAATCTCTCCAACC
AACGACGCACTCCACTCGCCCTCCTACCACCTCCACCCCCTCGATCTCCG
CAATCTACCCACCTCCCCTGCCCTCCCAGGCCTCGATCCCACTCTCCCCA
CCCTCCTCCTGTCTGAGTGTTGTCTCATATACCTCACCCCCAGCGAAGCC
AGCTTGGTAGTCCGCCACTTCACAGAAACCATCTTTCCGGCGACCACGCC
GGTAGGGTTGGTTCTGTATGAGCCCATCCGGCCAGACGATGCGTTCGGGC
GCACGATGGTGGCGAATCTAGCCACGAGGGGGATTCAGTTGCAGACATTG
CAGGAGTATGCGTCGCTGGGGGCGCAGCGACGGAGGTTACGGGAGATGGG
ATTGGACGGGGGGCAGGCGGCAGCAGATGTAGATTTCATCTGGGAAAGGT
GGGTGAGTGAGCGGGAGAAGGAACGGGTGGCAGGGTTGGAGATGTTGGAT
GAGATGGAGGAGTGGCAGTTATTGGCAAGACATTATTGTGTTGCATGGGG
GTGGAGGGATGTTCCTGGTGGAGTGTTTGAGGGATGGAGGGAGATGGAAG
GGCAGGAGGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0032259 | methylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008168 | methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012373-T1.utr5p1 | KJC3_012373-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012373-T1.utr3p1 | KJC3_012373-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR007213 |
| DBxref | InterPro:IPR016651 |
| DBxref | PFAM:PF04072 |
| Product | carboxy methyl transferase for protein phosphatase 2A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3386182..3387582 + |
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